Wall clock time and date at job start Sun Mar 7 2021 22:03:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42910 * 1 3 3 C 1.35996 * 116.99963 * 2 1 4 4 C 1.39150 * 120.06970 * 179.97438 * 3 2 1 5 5 O 1.35987 * 120.07533 * 359.97438 * 4 3 2 6 6 C 1.42902 * 116.99930 * 180.02562 * 5 4 3 7 7 C 1.50700 * 109.47149 * 180.02562 * 6 5 4 8 8 O 1.21279 * 120.00062 * 359.97438 * 7 6 5 9 9 N 1.34782 * 120.00039 * 180.02562 * 7 6 5 10 10 C 1.46503 * 119.99880 * 180.02562 * 9 7 6 11 11 H 1.09004 * 112.85227 * 25.32468 * 10 9 7 12 12 C 1.53783 * 113.61445 * 156.52454 * 10 9 7 13 13 C 1.53784 * 87.07731 * 139.97645 * 12 10 9 14 14 H 1.09003 * 113.61415 * 89.11939 * 13 12 10 15 15 O 1.42901 * 113.61278 * 219.93406 * 13 12 10 16 16 C 1.53785 * 113.60932 * 254.13257 * 10 9 7 17 17 C 1.38570 * 119.85007 * 180.02562 * 4 3 2 18 18 C 1.38238 * 119.99772 * 0.25849 * 17 4 3 19 19 C 1.38254 * 120.15025 * 359.48447 * 18 17 4 20 20 C 1.50695 * 119.92992 * 180.25886 * 19 18 17 21 21 O 1.42902 * 109.47056 * 245.25338 * 20 19 18 22 22 Si 1.86301 * 109.46922 * 5.25499 * 20 19 18 23 23 C 1.38247 * 120.14245 * 0.51541 * 19 18 17 24 24 H 1.09000 * 109.46792 * 299.99909 * 1 2 3 25 25 H 1.08998 * 109.46848 * 60.00277 * 1 2 3 26 26 H 1.09000 * 109.47018 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.47301 * 300.00327 * 6 5 4 28 28 H 1.09003 * 109.47154 * 60.00691 * 6 5 4 29 29 H 0.96991 * 119.99925 * 359.97438 * 9 7 6 30 30 H 1.08997 * 113.61066 * 254.52836 * 12 10 9 31 31 H 1.09000 * 113.61018 * 25.34524 * 12 10 9 32 32 H 0.96699 * 114.00408 * 180.02562 * 15 13 12 33 33 H 1.08998 * 113.61334 * 334.56487 * 16 10 9 34 34 H 1.08994 * 113.61554 * 105.47414 * 16 10 9 35 35 H 1.08002 * 119.99648 * 179.97438 * 17 4 3 36 36 H 1.08000 * 119.92674 * 179.74797 * 18 17 4 37 37 H 1.09000 * 109.47310 * 125.25869 * 20 19 18 38 38 H 0.96703 * 113.99984 * 179.97438 * 21 20 19 39 39 H 1.48504 * 109.99835 * 178.68385 * 22 20 19 40 40 H 1.48496 * 110.00210 * 299.99620 * 22 20 19 41 41 H 1.08001 * 119.99709 * 179.76743 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2863 0.0005 5 8 4.1795 0.1477 0.0016 6 6 5.6003 0.3007 0.0027 7 6 6.2519 -1.0582 0.0031 8 8 5.5670 -2.0591 0.0030 9 7 7.5958 -1.1612 0.0046 10 6 8.2292 -2.4822 0.0045 11 1 7.5940 -3.2562 -0.4265 12 6 9.6616 -2.4786 -0.5551 13 6 10.0183 -3.4679 0.5669 14 1 9.8727 -4.5123 0.2907 15 8 11.2948 -3.2238 1.1608 16 6 8.8412 -2.8720 1.3604 17 6 4.0604 2.5233 0.0011 18 6 3.3030 3.6798 0.0065 19 6 1.9224 3.6057 0.0006 20 6 1.1017 4.8695 0.0006 21 8 0.3642 4.9585 1.2214 22 14 2.2310 6.3434 -0.1516 23 6 1.2932 2.3747 0.0000 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 5.9073 0.8501 -0.8873 28 1 5.9059 0.8507 0.8927 29 1 8.1435 -0.3608 0.0051 30 1 9.7407 -2.9052 -1.5550 31 1 10.1630 -1.5149 -0.4651 32 1 11.5251 -3.8430 1.8670 33 1 9.1185 -2.0165 1.9763 34 1 8.2593 -3.6157 1.9045 35 1 5.1387 2.5839 0.0019 36 1 3.7908 4.6433 0.0110 37 1 0.4097 4.8534 -0.8414 38 1 -0.1876 5.7496 1.2908 39 1 1.4317 7.5945 -0.1847 40 1 3.1793 6.3768 0.9906 41 1 0.2146 2.3196 -0.0008 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_60476.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:07 Heat of formation + Delta-G solvation = -119.738615 kcal Electronic energy + Delta-G solvation = -25155.596681 eV Core-core repulsion = 21197.703037 eV Total energy + Delta-G solvation = -3957.893644 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.75723 -41.15608 -39.91318 -39.00061 -38.71912 -37.09687 -36.37916 -34.07498 -32.09810 -31.41594 -29.62824 -28.40565 -26.88809 -26.21628 -25.12451 -23.42540 -22.37305 -21.65514 -20.97194 -19.68675 -18.85909 -18.61681 -18.22479 -18.13144 -17.47745 -17.41338 -16.88648 -16.53154 -16.28266 -16.08737 -15.83226 -15.70503 -15.48771 -15.27291 -14.68529 -14.36535 -14.04963 -13.99349 -13.77649 -13.60249 -13.50153 -13.45340 -12.81238 -12.73351 -12.55249 -12.38466 -12.18739 -12.11960 -11.90017 -11.81494 -11.65953 -11.00214 -10.77597 -10.53057 -10.14228 -9.73026 -8.80542 -4.99932 0.22482 0.34886 1.24233 1.46298 1.50740 1.56067 1.91671 2.35619 2.53718 2.57710 3.17041 3.30011 3.32535 3.48375 3.57942 3.70102 3.70871 3.79511 3.83841 3.86593 3.95373 3.98525 4.17485 4.25115 4.31585 4.33740 4.39777 4.45612 4.60270 4.61173 4.63100 4.67187 4.81934 4.86650 5.02226 5.03593 5.14394 5.39464 5.44303 5.59445 6.00320 6.34277 6.39977 6.58630 6.59685 7.11934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.517 3.483 8 O -0.509 6.509 9 N -0.717 5.717 10 C 0.126 3.874 11 H 0.120 0.880 12 C -0.136 4.136 13 C 0.079 3.921 14 H 0.088 0.912 15 O -0.558 6.558 16 C -0.183 4.183 17 C -0.169 4.169 18 C -0.111 4.111 19 C -0.068 4.068 20 C -0.074 4.074 21 O -0.536 6.536 22 Si 0.685 3.315 23 C -0.145 4.145 24 H 0.056 0.944 25 H 0.056 0.944 26 H 0.103 0.897 27 H 0.096 0.904 28 H 0.094 0.906 29 H 0.404 0.596 30 H 0.084 0.916 31 H 0.097 0.903 32 H 0.382 0.618 33 H 0.094 0.906 34 H 0.077 0.923 35 H 0.140 0.860 36 H 0.133 0.867 37 H 0.076 0.924 38 H 0.380 0.620 39 H -0.262 1.262 40 H -0.254 1.254 41 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.331 3.056 -2.263 4.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.302 3.698 8 O -0.382 6.382 9 N -0.370 5.370 10 C 0.022 3.978 11 H 0.138 0.862 12 C -0.174 4.174 13 C 0.020 3.980 14 H 0.106 0.894 15 O -0.364 6.364 16 C -0.223 4.223 17 C -0.188 4.188 18 C -0.129 4.129 19 C -0.069 4.069 20 C -0.184 4.184 21 O -0.344 6.344 22 Si 0.586 3.414 23 C -0.164 4.164 24 H 0.075 0.925 25 H 0.074 0.926 26 H 0.121 0.879 27 H 0.114 0.886 28 H 0.112 0.888 29 H 0.239 0.761 30 H 0.103 0.897 31 H 0.115 0.885 32 H 0.230 0.770 33 H 0.112 0.888 34 H 0.095 0.905 35 H 0.158 0.842 36 H 0.150 0.850 37 H 0.094 0.906 38 H 0.227 0.773 39 H -0.187 1.187 40 H -0.179 1.179 41 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.397 2.577 -2.226 4.165 hybrid contribution -0.907 0.496 1.145 1.542 sum 1.491 3.073 -1.081 3.583 Atomic orbital electron populations 1.23126 0.78205 1.04360 1.01323 1.86248 1.21275 1.25326 1.88602 1.18240 0.89008 0.85497 1.01197 1.18261 0.88278 0.85749 1.01848 1.86272 1.16010 1.27754 1.88886 1.22486 0.81330 0.96212 1.04062 1.20076 0.82495 0.90606 0.76633 1.90792 1.62618 1.38046 1.46761 1.45735 1.05872 1.09228 1.76194 1.22245 0.92721 0.85741 0.97128 0.86179 1.23458 0.94178 1.01012 0.98738 1.23105 0.82575 0.98167 0.94184 0.89410 1.86509 1.35421 1.59045 1.55397 1.24245 0.97841 1.02362 0.97802 1.20965 1.00449 0.90587 1.06776 1.20672 0.92700 0.98069 1.01470 1.18925 0.92919 0.93139 1.01902 1.24782 1.00424 1.04053 0.89105 1.86601 1.62316 1.47313 1.38124 0.95008 0.81660 0.75308 0.89382 1.20910 1.00283 0.90443 1.04720 0.92541 0.92564 0.87895 0.88619 0.88777 0.76133 0.89715 0.88479 0.77009 0.88761 0.90452 0.84210 0.84989 0.90598 0.77250 1.18690 1.17904 0.84329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.46 10.28 -34.23 -0.35 -1.82 16 3 C 0.11 0.43 6.70 -39.12 -0.26 0.17 16 4 C 0.10 0.35 6.70 -39.12 -0.26 0.09 16 5 O -0.28 -1.22 9.45 -47.33 -0.45 -1.67 16 6 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 7 C 0.52 1.04 7.91 -10.98 -0.09 0.96 16 8 O -0.51 -3.64 16.12 -14.35 -0.23 -3.87 16 9 N -0.72 0.86 5.36 -53.01 -0.28 0.58 16 10 C 0.13 -0.08 4.21 -67.11 -0.28 -0.37 16 11 H 0.12 0.09 7.50 -51.93 -0.39 -0.30 16 12 C -0.14 0.23 7.66 -25.92 -0.20 0.04 16 13 C 0.08 -0.11 5.21 -25.83 -0.13 -0.24 16 14 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 15 O -0.56 0.13 13.68 -35.23 -0.48 -0.36 16 16 C -0.18 0.17 7.73 -25.83 -0.20 -0.03 16 17 C -0.17 -0.09 9.04 -39.46 -0.36 -0.45 16 18 C -0.11 -0.06 8.66 -39.58 -0.34 -0.41 16 19 C -0.07 -0.11 5.38 -104.62 -0.56 -0.67 16 20 C -0.07 0.01 2.79 36.00 0.10 0.11 16 21 O -0.54 -0.63 12.81 -35.23 -0.45 -1.08 16 22 Si 0.69 -0.82 29.85 -169.99 -5.07 -5.89 16 23 C -0.14 -0.35 8.67 -39.46 -0.34 -0.69 16 24 H 0.06 -0.01 7.66 -51.93 -0.40 -0.40 16 25 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 26 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.10 -0.31 7.66 -51.93 -0.40 -0.71 16 28 H 0.09 -0.26 7.66 -51.93 -0.40 -0.66 16 29 H 0.40 -1.74 8.71 -40.82 -0.36 -2.10 16 30 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 31 H 0.10 -0.19 8.11 -51.93 -0.42 -0.61 16 32 H 0.38 -1.53 9.12 45.56 0.42 -1.11 16 33 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.14 -0.39 6.30 -52.49 -0.33 -0.72 16 36 H 0.13 -0.20 4.85 -52.49 -0.25 -0.45 16 37 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 38 H 0.38 -1.09 8.74 45.56 0.40 -0.69 16 39 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 40 H -0.25 -0.44 7.04 56.52 0.40 -0.04 16 41 H 0.14 0.14 6.30 -52.49 -0.33 -0.19 16 LS Contribution 346.35 15.07 5.22 5.22 Total: 0.00 -12.24 346.35 -8.44 -20.68 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -4.59 Total: -11.49 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -1.75 Total: -0.30 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.28 Total: 0.58 kcal Atomic # 8 Polarization: -6.83 SS G_CDS: -1.96 Total: -8.79 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.07 Total: -5.89 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -12.24 -8.44 -20.68 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_60476.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.062 kcal (2) G-P(sol) polarization free energy of solvation -12.235 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.297 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.442 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.739 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds