Wall clock time and date at job start Sun Mar 7 2021 22:03:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35971 * 116.99860 * 2 1 4 4 C 1.39444 * 120.12307 * 180.02562 * 3 2 1 5 5 O 1.34780 * 133.24169 * 0.02562 * 4 3 2 6 6 C 1.34923 * 110.84254 * 179.66026 * 5 4 3 7 7 C 1.46997 * 125.14237 * 180.28548 * 6 5 4 8 8 O 1.21646 * 119.99929 * 180.19395 * 7 6 5 9 9 N 1.34773 * 119.99829 * 0.19079 * 7 6 5 10 10 C 1.46497 * 120.00239 * 180.02562 * 9 7 6 11 11 H 1.09005 * 112.84592 * 334.66751 * 10 9 7 12 12 C 1.53778 * 113.61496 * 105.86610 * 10 9 7 13 13 C 1.54044 * 86.98513 * 89.16523 * 12 10 9 14 14 H 1.09001 * 113.62122 * 139.98092 * 13 12 10 15 15 O 1.42907 * 113.68803 * 270.87178 * 13 12 10 16 16 C 1.53778 * 113.61744 * 203.47675 * 10 9 7 17 17 C 1.35811 * 109.72097 * 0.45392 * 6 5 4 18 18 C 1.40607 * 119.13810 * 179.97438 * 4 3 2 19 19 C 1.39776 * 120.11806 * 0.04314 * 18 4 3 20 20 C 1.50707 * 120.09164 * 179.97438 * 19 18 4 21 21 O 1.42898 * 109.47207 * 74.99487 * 20 19 18 22 22 Si 1.86298 * 109.46997 * 194.99758 * 20 19 18 23 23 C 1.36627 * 119.81612 * 359.97438 * 19 18 4 24 24 C 1.38266 * 120.11920 * 359.97438 * 3 2 1 25 25 H 1.08998 * 109.47194 * 60.00085 * 1 2 3 26 26 H 1.08997 * 109.46868 * 179.97438 * 1 2 3 27 27 H 1.09004 * 109.46758 * 300.00011 * 1 2 3 28 28 H 0.97008 * 119.99960 * 0.02562 * 9 7 6 29 29 H 1.09002 * 113.61475 * 203.67164 * 12 10 9 30 30 H 1.08999 * 113.61507 * 334.56874 * 12 10 9 31 31 H 0.96695 * 114.00037 * 277.52744 * 15 13 12 32 32 H 1.08995 * 113.61757 * 25.42983 * 16 10 9 33 33 H 1.09001 * 113.61998 * 156.25177 * 16 10 9 34 34 H 1.08002 * 126.96056 * 179.83705 * 17 6 5 35 35 H 1.09001 * 109.46761 * 314.99708 * 20 19 18 36 36 H 0.96702 * 113.99940 * 60.00015 * 21 20 19 37 37 H 1.48495 * 109.99805 * 180.02562 * 22 20 19 38 38 H 1.48500 * 109.99824 * 301.31821 * 22 20 19 39 39 H 1.07993 * 119.75496 * 180.02562 * 23 19 18 40 40 H 1.08001 * 119.65941 * 0.02569 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4386 1.2875 -0.0005 5 8 4.4141 0.3575 -0.0016 6 6 5.6317 0.9388 -0.0092 7 6 6.9131 0.2187 -0.0183 8 8 7.9595 0.8391 -0.0212 9 7 6.9287 -1.1289 -0.0235 10 6 8.2057 -1.8467 -0.0320 11 1 9.0176 -1.2610 -0.4634 12 6 8.5602 -2.4895 1.3193 13 6 7.7956 -3.7359 0.8348 14 1 8.2771 -4.6759 1.1044 15 8 6.4026 -3.7147 1.1533 16 6 8.1070 -3.2731 -0.5982 17 6 5.4944 2.2900 -0.0033 18 6 4.0553 2.5512 -0.0011 19 6 3.2764 3.7117 -0.0002 20 6 3.9380 5.0658 -0.0002 21 8 4.4596 5.3411 -1.3017 22 14 2.6865 6.3684 0.4557 23 6 1.9135 3.6152 0.0007 24 6 1.2956 2.3727 -0.0005 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3633 0.5139 0.8900 28 1 6.0943 -1.6237 -0.0215 29 1 9.6284 -2.6581 1.4558 30 1 8.0963 -1.9953 2.1729 31 1 6.2005 -4.0049 2.0533 32 1 7.2775 -3.4112 -1.2916 33 1 9.0511 -3.6552 -0.9864 34 1 6.2873 3.0233 -0.0046 35 1 4.7508 5.0730 0.7260 36 1 3.7904 5.3505 -1.9997 37 1 3.3263 7.7084 0.4586 38 1 1.5574 6.3474 -0.5086 39 1 1.3126 4.5125 0.0010 40 1 0.2173 2.3120 -0.0005 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_6672420.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:21 Heat of formation + Delta-G solvation = -77.639480 kcal Electronic energy + Delta-G solvation = -26988.727463 eV Core-core repulsion = 22931.744712 eV Total energy + Delta-G solvation = -4056.982750 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.118 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -43.61223 -41.32053 -40.61861 -39.47890 -39.08808 -37.06134 -36.13771 -33.93941 -33.51014 -31.86705 -30.89142 -28.70269 -26.86886 -26.51118 -26.00770 -24.26771 -23.91176 -22.01755 -21.60560 -20.63352 -19.83386 -19.00502 -18.64590 -18.16895 -17.77747 -17.62421 -17.06334 -16.98474 -16.61503 -16.39922 -16.19253 -15.85918 -15.63915 -15.47975 -15.13067 -14.62277 -14.61636 -14.46136 -14.04738 -13.74257 -13.64399 -13.42583 -13.39517 -13.29023 -12.76064 -12.59581 -12.39607 -12.32064 -12.11152 -11.65766 -11.56950 -11.33178 -10.89753 -10.79802 -10.58764 -10.13430 -9.71961 -8.95431 -4.98529 -0.53914 0.15699 0.76365 1.23570 1.35612 1.53765 1.93303 1.99097 2.09621 2.11830 2.43867 2.94542 3.27123 3.38472 3.40967 3.53821 3.63783 3.66528 3.74880 3.87087 3.90801 4.03184 4.06908 4.11586 4.12939 4.22402 4.47708 4.50697 4.51114 4.57412 4.60818 4.73793 4.76027 4.87182 4.90809 4.92856 4.94128 5.11078 5.27105 5.34667 5.47225 5.69674 6.20766 6.41347 6.45251 6.58463 7.04449 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.046 3.954 5 O -0.172 6.172 6 C -0.021 4.021 7 C 0.602 3.398 8 O -0.512 6.512 9 N -0.692 5.692 10 C 0.123 3.877 11 H 0.107 0.893 12 C -0.185 4.185 13 C 0.076 3.924 14 H 0.073 0.927 15 O -0.553 6.553 16 C -0.141 4.141 17 C -0.106 4.106 18 C -0.081 4.081 19 C -0.095 4.095 20 C -0.073 4.073 21 O -0.525 6.525 22 Si 0.692 3.308 23 C -0.096 4.096 24 C -0.179 4.179 25 H 0.060 0.940 26 H 0.105 0.895 27 H 0.061 0.939 28 H 0.415 0.585 29 H 0.102 0.898 30 H 0.079 0.921 31 H 0.385 0.615 32 H 0.085 0.915 33 H 0.112 0.888 34 H 0.174 0.826 35 H 0.119 0.881 36 H 0.375 0.625 37 H -0.255 1.255 38 H -0.258 1.258 39 H 0.140 0.860 40 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.436 -2.895 2.605 5.903 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.003 4.003 5 O -0.073 6.073 6 C -0.072 4.072 7 C 0.388 3.612 8 O -0.389 6.389 9 N -0.344 5.344 10 C 0.017 3.983 11 H 0.125 0.875 12 C -0.223 4.223 13 C 0.017 3.983 14 H 0.091 0.909 15 O -0.359 6.359 16 C -0.179 4.179 17 C -0.126 4.126 18 C -0.083 4.083 19 C -0.096 4.096 20 C -0.183 4.183 21 O -0.331 6.331 22 Si 0.593 3.407 23 C -0.114 4.114 24 C -0.198 4.198 25 H 0.078 0.922 26 H 0.124 0.876 27 H 0.080 0.920 28 H 0.253 0.747 29 H 0.120 0.880 30 H 0.097 0.903 31 H 0.234 0.766 32 H 0.103 0.897 33 H 0.131 0.869 34 H 0.192 0.808 35 H 0.136 0.864 36 H 0.223 0.777 37 H -0.180 1.180 38 H -0.183 1.183 39 H 0.157 0.843 40 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -3.546 -1.999 2.067 4.566 hybrid contribution -0.524 -0.586 -0.569 0.970 sum -4.070 -2.585 1.498 5.049 Atomic orbital electron populations 1.23190 0.77355 1.04755 1.01761 1.86187 1.22124 1.25668 1.88331 1.17753 0.86517 0.85880 0.99319 1.18792 0.87489 0.86995 1.06992 1.84080 1.12640 1.34647 1.75941 1.21967 0.83899 0.92562 1.08730 1.16635 0.85427 0.82173 0.76992 1.90909 1.30305 1.67529 1.50176 1.45588 1.10173 1.05317 1.73290 1.21843 0.86517 0.92751 0.97154 0.87458 1.24191 1.01862 0.97888 0.98404 1.22850 0.82162 0.96888 0.96394 0.90901 1.86386 1.22724 1.90157 1.36611 1.23448 1.03674 0.94555 0.96236 1.22739 0.94749 0.94280 1.00843 1.19408 0.92623 0.92042 1.04190 1.19394 0.92808 0.94306 1.03097 1.25034 1.06848 0.97954 0.88473 1.86639 1.37583 1.92636 1.16275 0.94899 0.77540 0.77847 0.90416 1.20575 0.93476 0.97782 0.99575 1.20960 1.00332 0.90531 1.07938 0.92184 0.87638 0.92027 0.74732 0.87969 0.90276 0.76620 0.89685 0.86934 0.80810 0.86360 0.77722 1.17994 1.18324 0.84270 0.83520 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.60 10.50 -19.65 -0.21 -0.81 16 3 C 0.15 0.33 6.70 -39.12 -0.26 0.07 16 4 C 0.05 0.17 7.35 -38.24 -0.28 -0.11 16 5 O -0.17 -0.74 10.28 2.66 0.03 -0.72 16 6 C -0.02 -0.09 7.07 -36.90 -0.26 -0.35 16 7 C 0.60 2.61 7.80 -12.71 -0.10 2.51 16 8 O -0.51 -3.51 16.44 5.24 0.09 -3.43 16 9 N -0.69 -1.48 5.14 -54.23 -0.28 -1.76 16 10 C 0.12 0.09 4.30 -67.12 -0.29 -0.20 16 11 H 0.11 0.16 7.50 -51.93 -0.39 -0.23 16 12 C -0.18 0.14 7.73 -25.78 -0.20 -0.06 16 13 C 0.08 -0.11 5.28 -25.78 -0.14 -0.24 16 14 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 15 O -0.55 0.33 12.35 -35.23 -0.44 -0.10 16 16 C -0.14 0.16 7.65 -25.92 -0.20 -0.04 16 17 C -0.11 -0.38 10.68 -37.23 -0.40 -0.78 16 18 C -0.08 -0.25 6.16 -105.21 -0.65 -0.90 16 19 C -0.10 -0.10 5.26 -104.63 -0.55 -0.65 16 20 C -0.07 -0.02 2.70 36.01 0.10 0.08 16 21 O -0.53 -0.94 12.88 -35.23 -0.45 -1.39 16 22 Si 0.69 -0.84 30.25 -169.99 -5.14 -5.98 16 23 C -0.10 0.04 8.62 -39.97 -0.34 -0.31 16 24 C -0.18 0.05 9.03 -39.37 -0.36 -0.31 16 25 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 26 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 27 H 0.06 -0.23 7.66 -51.93 -0.40 -0.63 16 28 H 0.42 0.74 7.35 -40.82 -0.30 0.44 16 29 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 31 H 0.39 -1.57 9.12 45.56 0.42 -1.15 16 32 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 33 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 34 H 0.17 0.51 8.06 -52.49 -0.42 0.08 16 35 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 36 H 0.38 -0.45 8.70 45.56 0.40 -0.05 16 37 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 38 H -0.26 0.01 6.69 56.52 0.38 0.39 16 39 H 0.14 -0.33 4.81 -52.49 -0.25 -0.58 16 40 H 0.15 -0.45 6.26 -52.49 -0.33 -0.78 16 LS Contribution 341.71 15.07 5.15 5.15 Total: 0.00 -8.71 341.71 -8.03 -16.74 By element: Atomic # 1 Polarization: -3.49 SS G_CDS: -3.85 Total: -7.34 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: -2.93 Total: -0.36 kcal Atomic # 7 Polarization: -1.48 SS G_CDS: -0.28 Total: -1.76 kcal Atomic # 8 Polarization: -5.47 SS G_CDS: -0.98 Total: -6.45 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.14 Total: -5.98 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -8.71 -8.03 -16.74 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_6672420.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.896 kcal (2) G-P(sol) polarization free energy of solvation -8.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.744 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds