Wall clock time and date at job start Sun Mar 7 2021 22:03:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33815 * 122.45067 * 2 1 4 4 C 1.50703 * 124.51906 * 0.02562 * 3 2 1 5 5 O 1.42901 * 109.47225 * 113.45480 * 4 3 2 6 6 Si 1.86302 * 109.47066 * 233.45482 * 4 3 2 7 7 S 1.70615 * 110.95964 * 180.02562 * 3 2 1 8 8 C 1.75836 * 91.55958 * 0.02562 * 7 3 2 9 9 C 1.46586 * 125.45237 * 180.02562 * 8 7 3 10 10 O 1.21707 * 119.99500 * 180.02562 * 9 8 7 11 11 N 1.34776 * 120.00468 * 0.02562 * 9 8 7 12 12 C 1.46495 * 119.99832 * 179.72572 * 11 9 8 13 13 H 1.09001 * 112.85309 * 334.94047 * 12 11 9 14 14 C 1.53784 * 113.61633 * 106.13654 * 12 11 9 15 15 C 1.54050 * 86.98219 * 89.15866 * 14 12 11 16 16 H 1.09009 * 113.62038 * 139.98305 * 15 14 12 17 17 O 1.42897 * 113.69402 * 270.87298 * 15 14 12 18 18 C 1.53781 * 87.07998 * 25.43399 * 15 14 12 19 19 C 1.36641 * 109.08540 * 0.26257 * 8 7 3 20 20 H 1.08995 * 109.47506 * 85.00927 * 1 2 3 21 21 H 1.09004 * 109.46731 * 205.00875 * 1 2 3 22 22 H 1.08996 * 109.46799 * 325.00560 * 1 2 3 23 23 H 1.08997 * 109.47287 * 353.45059 * 4 3 2 24 24 H 0.96702 * 113.99770 * 179.97438 * 5 4 3 25 25 H 1.48501 * 109.99914 * 300.00103 * 6 4 3 26 26 H 1.48496 * 110.00323 * 61.31610 * 6 4 3 27 27 H 0.97002 * 119.99387 * 359.97438 * 11 9 8 28 28 H 1.08991 * 113.61584 * 203.66116 * 14 12 11 29 29 H 1.09001 * 113.60921 * 334.56956 * 14 12 11 30 30 H 0.96701 * 114.00114 * 277.53745 * 17 15 14 31 31 H 1.08997 * 113.61336 * 220.01841 * 18 15 14 32 32 H 1.09001 * 113.69112 * 89.12795 * 18 15 14 33 33 H 1.07997 * 123.35104 * 179.74172 * 19 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6354 2.5161 0.0006 5 8 1.9431 3.1640 1.2365 6 14 2.3545 3.4971 -1.4106 7 16 3.8970 0.7893 -0.0007 8 6 3.5937 -0.9427 -0.0018 9 6 4.6233 -1.9861 -0.0023 10 8 4.3003 -3.1596 -0.0035 11 7 5.9274 -1.6462 -0.0013 12 6 6.9562 -2.6891 0.0043 13 1 6.6050 -3.6278 0.4326 14 6 7.6699 -2.8576 -1.3475 15 6 8.6708 -1.7930 -0.8595 16 1 9.7045 -2.0091 -1.1296 17 8 8.2835 -0.4540 -1.1740 18 6 8.3061 -2.2197 0.5722 19 6 2.2447 -1.1601 -0.0075 20 1 -0.3634 0.0894 -1.0237 21 1 -0.3633 -0.9314 0.4345 22 1 -0.3633 0.8419 0.5894 23 1 0.5537 2.4511 -0.1163 24 1 1.5942 4.0632 1.3067 25 1 3.8291 3.5930 -1.2631 26 1 2.0145 2.8510 -2.7037 27 1 6.1847 -0.7109 -0.0007 28 1 8.1141 -3.8431 -1.4867 29 1 7.0711 -2.5377 -2.2002 30 1 8.5102 -0.1798 -2.0732 31 1 8.2206 -1.3852 1.2681 32 1 8.9233 -3.0310 0.9580 33 1 1.8021 -2.1452 -0.0133 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_6739946.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:25 Heat of formation + Delta-G solvation = -55.505169 kcal Electronic energy + Delta-G solvation = -18538.417095 eV Core-core repulsion = 15465.363072 eV Total energy + Delta-G solvation = -3073.054023 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 270.076 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -41.35347 -40.09140 -39.20141 -37.54105 -36.11842 -33.96105 -32.34822 -29.98742 -27.19506 -26.88086 -25.23018 -23.98778 -21.87109 -20.71721 -19.92952 -19.25458 -18.54061 -18.27585 -17.39612 -16.99809 -16.41477 -16.09517 -15.81675 -15.65215 -15.23720 -15.00086 -14.64796 -14.31574 -14.24364 -13.76328 -13.66397 -13.32712 -13.12746 -12.96498 -12.77898 -12.60295 -12.41090 -12.23026 -11.78917 -11.57060 -11.04891 -10.81817 -10.62796 -10.09709 -9.72155 -9.42999 -5.19971 -0.61688 0.37365 0.79361 1.06411 1.30699 1.54228 1.86824 2.03579 2.19871 2.92570 3.15761 3.37451 3.58471 3.72541 3.73953 3.81736 4.01582 4.09564 4.15003 4.36960 4.44075 4.56166 4.59375 4.64680 4.71664 4.75170 4.82653 4.90059 4.93238 4.96930 5.25188 5.36441 5.52518 6.43897 6.46014 6.55045 7.16967 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C -0.099 4.099 3 C -0.193 4.193 4 C -0.039 4.039 5 O -0.544 6.544 6 Si 0.672 3.328 7 S 0.221 5.779 8 C -0.265 4.265 9 C 0.594 3.406 10 O -0.527 6.527 11 N -0.703 5.703 12 C 0.125 3.875 13 H 0.107 0.893 14 C -0.185 4.185 15 C 0.077 3.923 16 H 0.074 0.926 17 O -0.554 6.554 18 C -0.142 4.142 19 C -0.047 4.047 20 H 0.074 0.926 21 H 0.073 0.927 22 H 0.072 0.928 23 H 0.087 0.913 24 H 0.386 0.614 25 H -0.240 1.240 26 H -0.249 1.249 27 H 0.406 0.594 28 H 0.102 0.898 29 H 0.077 0.923 30 H 0.385 0.615 31 H 0.084 0.916 32 H 0.113 0.887 33 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.284 4.775 -1.631 5.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.113 4.113 3 C -0.312 4.312 4 C -0.151 4.151 5 O -0.351 6.351 6 Si 0.571 3.429 7 S 0.491 5.509 8 C -0.386 4.386 9 C 0.380 3.620 10 O -0.405 6.405 11 N -0.355 5.355 12 C 0.019 3.981 13 H 0.125 0.875 14 C -0.224 4.224 15 C 0.017 3.983 16 H 0.092 0.908 17 O -0.361 6.361 18 C -0.180 4.180 19 C -0.080 4.080 20 H 0.092 0.908 21 H 0.092 0.908 22 H 0.091 0.909 23 H 0.105 0.895 24 H 0.235 0.765 25 H -0.163 1.163 26 H -0.173 1.173 27 H 0.242 0.758 28 H 0.120 0.880 29 H 0.096 0.904 30 H 0.234 0.766 31 H 0.102 0.898 32 H 0.131 0.869 33 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 2.046 4.253 -1.591 4.980 hybrid contribution -1.115 -0.914 -0.359 1.486 sum 0.931 3.339 -1.950 3.977 Atomic orbital electron populations 1.20603 0.88844 1.03588 1.02715 1.18707 0.98277 0.90668 1.03615 1.23253 0.98807 0.98268 1.10882 1.24132 1.02906 0.91666 0.96397 1.86516 1.80144 1.32787 1.35607 0.95529 0.82707 0.88187 0.76503 1.83177 1.03182 0.97651 1.66938 1.24631 0.98127 0.97328 1.18508 1.16925 0.81619 0.87368 0.76077 1.90844 1.81652 1.18089 1.49912 1.45538 1.04631 1.10345 1.75000 1.21789 0.87209 0.92119 0.96933 0.87532 1.24194 0.99062 1.00637 0.98513 1.22859 0.96773 0.82167 0.96482 0.90835 1.86365 1.84409 1.28587 1.36712 1.23460 0.96134 1.02227 0.96162 1.20667 0.90840 0.99978 0.96480 0.90761 0.90758 0.90874 0.89473 0.76533 1.16338 1.17340 0.75806 0.87997 0.90393 0.76635 0.89763 0.86921 0.82433 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.03 9.48 36.01 0.34 0.37 16 2 C -0.10 -0.23 5.78 -106.45 -0.62 -0.84 16 3 C -0.19 -0.47 4.86 -35.86 -0.17 -0.64 16 4 C -0.04 0.01 2.76 36.01 0.10 0.11 16 5 O -0.54 0.13 12.86 -35.23 -0.45 -0.32 16 6 Si 0.67 -0.76 32.14 -169.99 -5.46 -6.23 16 7 S 0.22 0.60 20.84 -107.50 -2.24 -1.64 16 8 C -0.27 -1.08 6.45 -36.79 -0.24 -1.31 16 9 C 0.59 3.05 7.78 -12.89 -0.10 2.95 16 10 O -0.53 -4.26 16.46 5.18 0.09 -4.18 16 11 N -0.70 -1.95 5.14 -54.35 -0.28 -2.23 16 12 C 0.13 0.18 4.30 -67.12 -0.29 -0.11 16 13 H 0.11 0.26 7.50 -51.93 -0.39 -0.13 16 14 C -0.19 0.03 7.73 -25.78 -0.20 -0.17 16 15 C 0.08 -0.08 5.28 -25.78 -0.14 -0.22 16 16 H 0.07 -0.18 8.14 -51.92 -0.42 -0.60 16 17 O -0.55 0.27 12.35 -35.23 -0.44 -0.17 16 18 C -0.14 0.10 7.65 -25.92 -0.20 -0.10 16 19 C -0.05 -0.16 9.78 -40.44 -0.40 -0.55 16 20 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 21 H 0.07 -0.06 8.11 -51.93 -0.42 -0.48 16 22 H 0.07 -0.07 6.98 -51.93 -0.36 -0.44 16 23 H 0.09 -0.19 6.24 -51.93 -0.32 -0.51 16 24 H 0.39 -2.10 8.74 45.56 0.40 -1.70 16 25 H -0.24 -0.37 7.11 56.52 0.40 0.03 16 26 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 27 H 0.41 0.78 6.75 -40.82 -0.28 0.51 16 28 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 29 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 30 H 0.39 -1.54 9.12 45.56 0.42 -1.13 16 31 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.16 0.42 8.06 -52.49 -0.42 0.00 16 LS Contribution 296.18 15.07 4.46 4.46 Total: 0.00 -8.51 296.18 -9.34 -17.86 By element: Atomic # 1 Polarization: -3.92 SS G_CDS: -3.12 Total: -7.04 kcal Atomic # 6 Polarization: 1.39 SS G_CDS: -1.90 Total: -0.52 kcal Atomic # 7 Polarization: -1.95 SS G_CDS: -0.28 Total: -2.23 kcal Atomic # 8 Polarization: -3.86 SS G_CDS: -0.80 Total: -4.66 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.46 Total: -6.23 kcal Atomic # 16 Polarization: 0.60 SS G_CDS: -2.24 Total: -1.64 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -8.51 -9.34 -17.86 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_6739946.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.650 kcal (2) G-P(sol) polarization free energy of solvation -8.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.165 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.340 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.505 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds