Wall clock time and date at job start Sun Mar 7 2021 22:03:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86300 * 109.46862 * 2 1 4 4 C 1.50700 * 109.46928 * 119.99752 * 2 1 3 5 5 C 1.38228 * 119.94029 * 245.02074 * 4 2 1 6 6 C 1.38205 * 120.07754 * 179.76682 * 5 4 2 7 7 C 1.38661 * 119.95455 * 0.46701 * 6 5 4 8 8 O 1.35921 * 120.06047 * 179.78973 * 7 6 5 9 9 C 1.42899 * 116.99824 * 359.72392 * 8 7 6 10 10 C 1.53005 * 109.46984 * 180.02562 * 9 8 7 11 11 N 1.46507 * 109.46808 * 179.97438 * 10 9 8 12 12 C 1.34814 * 126.59046 * 125.24435 * 11 10 9 13 13 C 1.36597 * 106.84007 * 180.13116 * 12 11 10 14 14 C 1.47519 * 125.77183 * 179.89941 * 13 12 11 15 15 O 1.21593 * 120.00072 * 359.71586 * 14 13 12 16 16 N 1.34777 * 119.99665 * 179.71279 * 14 13 12 17 17 C 1.46499 * 119.99665 * 179.72393 * 16 14 13 18 18 H 1.09004 * 112.85025 * 334.94284 * 17 16 14 19 19 C 1.53777 * 113.61716 * 106.14251 * 17 16 14 20 20 C 1.54051 * 86.98700 * 89.15735 * 19 17 16 21 21 H 1.09006 * 113.69132 * 139.98651 * 20 19 17 22 22 O 1.42896 * 113.61710 * 270.88694 * 20 19 17 23 23 C 1.53780 * 113.61505 * 203.74929 * 17 16 14 24 24 N 1.34402 * 108.45511 * 359.63223 * 13 12 11 25 25 N 1.28761 * 109.52544 * 0.23293 * 24 13 12 26 26 C 1.38863 * 119.88027 * 359.51267 * 7 6 5 27 27 Cl 1.73595 * 120.03761 * 180.27344 * 26 7 6 28 28 C 1.38210 * 119.92136 * 0.25660 * 26 7 6 29 29 H 0.96700 * 113.99766 * 300.00549 * 1 2 3 30 30 H 1.08998 * 109.47108 * 239.99793 * 2 1 3 31 31 H 1.48510 * 109.99664 * 178.68051 * 3 2 1 32 32 H 1.48505 * 110.00054 * 299.99578 * 3 2 1 33 33 H 1.07998 * 119.96267 * 0.02562 * 5 4 2 34 34 H 1.07998 * 120.01952 * 180.25810 * 6 5 4 35 35 H 1.08995 * 109.47104 * 60.00293 * 9 8 7 36 36 H 1.08998 * 109.47046 * 299.99583 * 9 8 7 37 37 H 1.08995 * 109.47076 * 60.00135 * 10 9 8 38 38 H 1.08998 * 109.46774 * 299.99608 * 10 9 8 39 39 H 1.07999 * 126.57998 * 359.97438 * 12 11 10 40 40 H 0.97001 * 120.00485 * 0.02562 * 16 14 13 41 41 H 1.08998 * 113.61893 * 203.66386 * 19 17 16 42 42 H 1.09002 * 113.61386 * 334.56623 * 19 17 16 43 43 H 0.96696 * 114.00337 * 277.49170 * 22 20 19 44 44 H 1.09001 * 113.61616 * 25.43376 * 23 17 16 45 45 H 1.09000 * 113.61670 * 156.33503 * 23 17 16 46 46 H 1.08002 * 119.97731 * 179.97438 * 28 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6382 -0.0109 2.1907 6 6 3.0960 -0.6585 3.3225 7 6 2.8543 -2.0135 3.4904 8 8 3.3072 -2.6535 4.6007 9 6 4.0307 -1.8695 5.5516 10 6 4.4568 -2.7554 6.7241 11 7 5.1991 -1.9517 7.6986 12 6 4.9237 -1.8253 9.0122 13 6 5.8643 -0.9837 9.5345 14 6 5.9520 -0.5567 10.9439 15 8 5.1364 -0.9566 11.7522 16 7 6.9361 0.2767 11.3355 17 6 7.0196 0.7056 12.7338 18 1 6.0583 0.6678 13.2462 19 6 8.1615 0.0360 13.5164 20 6 9.0551 1.2010 13.0500 21 1 9.7384 1.5636 13.8181 22 8 9.7033 0.9603 11.7995 23 6 7.7687 2.0346 12.9268 24 7 6.7000 -0.6152 8.5485 25 7 6.3355 -1.1705 7.4455 26 6 2.1436 -2.7143 2.5250 27 17 1.8325 -4.4093 2.7344 28 6 1.6840 -2.0607 1.3973 29 1 -0.3933 0.4418 0.7650 30 1 1.7924 -0.5139 -0.8899 31 1 3.5347 1.7703 0.0321 32 1 1.5615 2.4679 -1.2086 33 1 2.8294 1.0437 2.0582 34 1 3.6446 -0.1102 4.0741 35 1 3.3945 -1.0636 5.9171 36 1 4.9155 -1.4468 5.0758 37 1 5.0932 -3.5611 6.3582 38 1 3.5722 -3.1785 7.2000 39 1 4.1132 -2.2967 9.5482 40 1 7.5866 0.5960 10.6906 41 1 7.9987 0.0149 14.5939 42 1 8.4582 -0.9322 13.1131 43 1 10.5130 0.4365 11.8705 44 1 7.7485 2.6789 12.0479 45 1 7.4987 2.5589 13.8435 46 1 1.1315 -2.6049 0.6456 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_7143556.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:31 Heat of formation + Delta-G solvation = 3.193374 kcal Electronic energy + Delta-G solvation = -32721.438964 eV Core-core repulsion = 27835.727058 eV Total energy + Delta-G solvation = -4885.711905 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.113 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -43.37590 -41.53164 -41.17937 -39.52708 -39.40616 -37.75872 -37.10976 -36.18725 -36.00182 -33.87022 -32.55157 -32.04293 -31.89781 -30.62126 -26.79906 -26.73396 -26.09109 -25.74115 -24.24021 -23.89237 -22.85070 -22.46712 -21.60124 -20.54266 -19.85323 -19.14281 -18.45377 -18.09845 -17.71657 -17.40569 -17.28302 -17.15041 -16.97880 -16.71327 -16.25277 -16.05814 -15.93135 -15.75282 -15.59612 -15.42788 -15.06273 -14.93066 -14.85801 -14.68995 -14.53197 -13.87426 -13.73838 -13.61136 -13.52204 -13.48549 -13.18978 -12.65429 -12.60222 -12.56535 -12.34549 -12.28066 -12.19313 -12.17261 -11.98573 -11.75934 -11.49851 -11.45417 -11.30819 -10.65607 -10.52107 -10.48066 -10.05086 -10.03515 -9.36266 -5.02199 -0.04860 0.00381 0.05555 0.51356 0.70955 1.04653 1.32141 1.62445 1.94437 1.97520 2.04024 2.13808 2.36449 3.05508 3.17461 3.22047 3.45659 3.47389 3.51520 3.61288 3.65099 3.71681 3.75471 3.80858 3.86842 3.87837 3.97219 4.03874 4.08100 4.18154 4.27869 4.41271 4.41722 4.50449 4.61129 4.63967 4.75649 4.76300 4.81222 4.85546 4.89054 4.96814 5.01104 5.06971 5.19626 5.24319 5.43827 5.54310 5.99672 6.37370 6.76309 6.79114 6.87749 7.07607 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.070 4.070 3 Si 0.776 3.224 4 C -0.144 4.144 5 C -0.067 4.067 6 C -0.189 4.189 7 C 0.137 3.863 8 O -0.305 6.305 9 C 0.046 3.954 10 C 0.123 3.877 11 N -0.350 5.350 12 C 0.121 3.879 13 C -0.124 4.124 14 C 0.605 3.395 15 O -0.569 6.569 16 N -0.686 5.686 17 C 0.110 3.890 18 H 0.095 0.905 19 C -0.180 4.180 20 C 0.079 3.921 21 H 0.090 0.910 22 O -0.570 6.570 23 C -0.136 4.136 24 N -0.216 5.216 25 N -0.082 5.082 26 C -0.082 4.082 27 Cl -0.062 7.062 28 C -0.054 4.054 29 H 0.396 0.604 30 H 0.109 0.891 31 H -0.283 1.283 32 H -0.301 1.301 33 H 0.159 0.841 34 H 0.161 0.839 35 H 0.087 0.913 36 H 0.081 0.919 37 H 0.122 0.878 38 H 0.151 0.849 39 H 0.239 0.761 40 H 0.416 0.584 41 H 0.115 0.885 42 H 0.064 0.936 43 H 0.398 0.602 44 H 0.075 0.925 45 H 0.132 0.868 46 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.101 2.748 3.710 4.618 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.179 4.179 3 Si 0.682 3.318 4 C -0.145 4.145 5 C -0.084 4.084 6 C -0.207 4.207 7 C 0.091 3.909 8 O -0.218 6.218 9 C -0.030 4.030 10 C 0.002 3.998 11 N -0.135 5.135 12 C -0.037 4.037 13 C -0.264 4.264 14 C 0.390 3.610 15 O -0.447 6.447 16 N -0.336 5.336 17 C 0.004 3.996 18 H 0.113 0.887 19 C -0.219 4.219 20 C 0.019 3.981 21 H 0.108 0.892 22 O -0.378 6.378 23 C -0.174 4.174 24 N -0.090 5.090 25 N -0.063 5.063 26 C -0.109 4.109 27 Cl -0.033 7.033 28 C -0.072 4.072 29 H 0.246 0.754 30 H 0.126 0.874 31 H -0.210 1.210 32 H -0.229 1.229 33 H 0.176 0.824 34 H 0.178 0.822 35 H 0.105 0.895 36 H 0.099 0.901 37 H 0.140 0.860 38 H 0.169 0.831 39 H 0.255 0.745 40 H 0.253 0.747 41 H 0.133 0.867 42 H 0.082 0.918 43 H 0.248 0.752 44 H 0.094 0.906 45 H 0.150 0.850 46 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.533 3.174 2.071 3.827 hybrid contribution 0.234 -1.437 0.147 1.464 sum 0.768 1.737 2.219 2.920 Atomic orbital electron populations 1.86492 1.17129 1.82152 1.50556 1.25149 0.85365 1.10715 0.96699 0.93838 0.77885 0.74894 0.85173 1.20295 1.02032 0.93836 0.98360 1.21162 0.94697 1.00544 0.92027 1.21429 1.05673 0.92303 1.01333 1.18689 0.94413 0.91259 0.86570 1.85999 1.68885 1.37979 1.28939 1.22984 0.97107 0.94150 0.88766 1.21929 0.98422 0.91694 0.87706 1.50355 1.21350 1.33928 1.07874 1.23900 0.99812 0.95838 0.84114 1.21462 1.00419 1.08972 0.95523 1.16926 0.80877 0.78338 0.84883 1.90801 1.42482 1.57780 1.53667 1.45502 1.30005 1.46955 1.11175 1.21992 0.99637 0.96367 0.81561 0.88692 1.24186 0.96934 0.98979 1.01785 1.22892 0.93665 0.95255 0.86245 0.89198 1.86363 1.44377 1.76654 1.30408 1.23502 0.93636 0.95547 1.04698 1.74654 1.21241 1.16200 0.96943 1.81987 0.99416 1.08314 1.16546 1.20364 1.06549 0.86609 0.97425 1.98384 1.94631 1.13064 1.97269 1.20872 0.97022 0.94245 0.95106 0.75379 0.87404 1.20980 1.22867 0.82409 0.82201 0.89529 0.90091 0.86045 0.83128 0.74454 0.74652 0.86679 0.91753 0.75200 0.90637 0.85008 0.84002 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.78 12.83 -148.98 -1.91 -1.13 16 2 C -0.07 0.17 2.80 71.24 0.20 0.37 16 3 Si 0.78 -3.26 29.80 68.60 2.04 -1.21 16 4 C -0.14 0.29 5.35 -19.85 -0.11 0.18 16 5 C -0.07 0.31 8.66 22.26 0.19 0.50 16 6 C -0.19 0.72 9.04 22.36 0.20 0.93 16 7 C 0.14 -0.04 6.68 22.52 0.15 0.11 16 8 O -0.31 0.62 9.60 -92.66 -0.89 -0.27 16 9 C 0.05 -0.32 4.95 71.98 0.36 0.04 16 10 C 0.12 -1.11 6.91 86.38 0.60 -0.51 16 11 N -0.35 1.06 3.69 -347.08 -1.28 -0.23 16 12 C 0.12 -0.28 11.27 83.85 0.95 0.66 16 13 C -0.12 -0.53 6.99 40.81 0.29 -0.24 16 14 C 0.60 4.29 7.82 86.69 0.68 4.96 16 15 O -0.57 -6.63 16.48 -4.01 -0.07 -6.70 16 16 N -0.69 -2.99 5.14 -443.22 -2.28 -5.26 16 17 C 0.11 0.15 4.30 45.52 0.20 0.35 16 18 H 0.10 0.32 7.50 -2.39 -0.02 0.30 16 19 C -0.18 0.30 7.73 31.21 0.24 0.54 16 20 C 0.08 -0.26 5.28 31.21 0.16 -0.09 16 21 H 0.09 -0.61 8.14 -2.38 -0.02 -0.63 16 22 O -0.57 0.58 12.34 -148.98 -1.84 -1.26 16 23 C -0.14 0.38 7.65 31.12 0.24 0.62 16 24 N -0.22 -1.39 12.04 -50.00 -0.60 -1.99 16 25 N -0.08 -0.34 13.65 37.02 0.51 0.17 16 26 C -0.08 -0.17 6.33 22.41 0.14 -0.03 16 27 Cl -0.06 -0.23 28.51 -2.72 -0.08 -0.31 16 28 C -0.05 -0.04 9.46 22.28 0.21 0.17 16 29 H 0.40 -3.81 8.70 -74.06 -0.64 -4.46 16 30 H 0.11 -0.12 7.96 -2.39 -0.02 -0.14 16 31 H -0.28 -0.11 7.11 99.48 0.71 0.60 16 32 H -0.30 -1.20 7.11 99.48 0.71 -0.50 16 33 H 0.16 -1.50 4.90 -2.91 -0.01 -1.51 16 34 H 0.16 -1.27 6.30 -2.91 -0.02 -1.29 16 35 H 0.09 -0.76 7.65 -2.39 -0.02 -0.78 16 36 H 0.08 -0.46 7.67 -2.39 -0.02 -0.48 16 37 H 0.12 -1.17 8.14 -2.39 -0.02 -1.19 16 38 H 0.15 -2.19 8.08 -2.39 -0.02 -2.21 16 39 H 0.24 -2.21 8.06 -2.91 -0.02 -2.24 16 40 H 0.42 1.86 7.32 -92.71 -0.68 1.18 16 41 H 0.11 -0.56 8.14 -2.39 -0.02 -0.58 16 42 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 43 H 0.40 -3.13 9.12 -74.06 -0.68 -3.81 16 44 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 45 H 0.13 -0.96 8.14 -2.39 -0.02 -0.98 16 46 H 0.14 0.09 8.06 -2.91 -0.02 0.06 16 Total: 0.00 -25.69 409.67 -2.57 -28.26 By element: Atomic # 1 Polarization: -17.77 SS G_CDS: -0.87 Total: -18.64 kcal Atomic # 6 Polarization: 3.88 SS G_CDS: 4.69 Total: 8.57 kcal Atomic # 7 Polarization: -3.66 SS G_CDS: -3.65 Total: -7.31 kcal Atomic # 8 Polarization: -4.65 SS G_CDS: -4.71 Total: -9.35 kcal Atomic # 14 Polarization: -3.26 SS G_CDS: 2.04 Total: -1.21 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -0.08 Total: -0.31 kcal Total: -25.69 -2.57 -28.26 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_7143556.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.453 kcal (2) G-P(sol) polarization free energy of solvation -25.686 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.260 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds