Wall clock time and date at job start Sun Mar 7 2021 22:03:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37939 * 120.06977 * 2 1 4 4 C 1.38381 * 120.14309 * 180.27733 * 3 2 1 5 5 C 1.50701 * 119.85832 * 179.72019 * 4 3 2 6 6 C 1.38339 * 120.29265 * 359.73883 * 4 3 2 7 7 C 1.50698 * 119.92761 * 180.02562 * 6 4 3 8 8 O 1.42894 * 109.47562 * 75.02190 * 7 6 4 9 9 Si 1.86299 * 109.47017 * 195.02200 * 7 6 4 10 10 C 1.37973 * 120.14538 * 0.02562 * 6 4 3 11 11 C 1.39556 * 119.85408 * 359.97438 * 10 6 4 12 12 C 1.47848 * 120.14940 * 179.97438 * 11 10 6 13 13 O 1.21548 * 120.00293 * 173.75486 * 12 11 10 14 14 N 1.34778 * 119.99523 * 353.75615 * 12 11 10 15 15 C 1.46502 * 119.99556 * 179.97438 * 14 12 11 16 16 H 1.08993 * 112.90769 * 23.75124 * 15 14 12 17 17 C 1.53786 * 113.61223 * 155.00039 * 15 14 12 18 18 C 1.53780 * 87.08219 * 89.11513 * 17 15 14 19 19 H 1.08994 * 113.61450 * 140.06983 * 18 17 15 20 20 O 1.42900 * 113.61461 * 270.88513 * 18 17 15 21 21 C 1.53779 * 87.07982 * 25.43327 * 18 17 15 22 22 H 1.08997 * 109.47045 * 263.62477 * 1 2 3 23 23 H 1.09000 * 109.46986 * 23.62572 * 1 2 3 24 24 H 1.08997 * 109.46478 * 143.62731 * 1 2 3 25 25 H 1.07995 * 119.93290 * 0.03485 * 3 2 1 26 26 H 1.09002 * 109.46834 * 270.02536 * 5 4 3 27 27 H 1.09006 * 109.46679 * 30.01360 * 5 4 3 28 28 H 1.08993 * 109.47756 * 150.01880 * 5 4 3 29 29 H 1.09000 * 109.46988 * 315.01837 * 7 6 4 30 30 H 0.96697 * 114.00578 * 59.99573 * 8 7 6 31 31 H 1.48500 * 110.00172 * 179.97438 * 9 7 6 32 32 H 1.48504 * 109.99955 * 301.31263 * 9 7 6 33 33 H 1.08000 * 120.07727 * 179.97438 * 10 6 4 34 34 H 0.96996 * 120.00379 * 359.97438 * 14 12 11 35 35 H 1.09001 * 113.61289 * 334.56862 * 17 15 14 36 36 H 1.08996 * 113.69209 * 203.67914 * 17 15 14 37 37 H 0.96702 * 113.99765 * 179.97438 * 20 18 17 38 38 H 1.08995 * 113.61875 * 89.11746 * 21 18 17 39 39 H 1.09000 * 113.61451 * 220.01936 * 21 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1955 -0.0058 5 6 4.3306 2.5035 -0.0121 6 6 4.2813 0.0019 -0.0062 7 6 5.7882 0.0135 -0.0119 8 8 6.2669 0.3678 1.2870 9 14 6.4205 -1.6790 -0.4663 10 6 3.6022 -1.1991 -0.0013 11 6 2.2066 -1.2080 0.0046 12 6 1.4723 -2.4912 0.0092 13 8 0.2627 -2.4988 0.1288 14 7 2.1441 -3.6525 -0.1191 15 6 1.4165 -4.9240 -0.1139 16 1 0.3734 -4.8171 -0.4113 17 6 2.1528 -6.0581 -0.8465 18 6 2.8305 -6.3792 0.4961 19 1 2.9301 -7.4471 0.6904 20 8 4.0469 -5.6605 0.7097 21 6 1.6089 -5.7387 1.1761 22 1 -0.3633 -0.1141 1.0213 23 1 -0.3633 0.9415 -0.4119 24 1 -0.3632 -0.8275 -0.6094 25 1 1.6582 2.1290 0.0006 26 1 4.5063 2.8165 -1.0414 27 1 3.7408 3.2621 0.5026 28 1 5.2857 2.3780 0.4977 29 1 6.1432 0.7417 -0.7411 30 1 5.9889 -0.2381 1.9875 31 1 7.9054 -1.6808 -0.4762 32 1 5.9174 -2.6861 0.5022 33 1 4.1492 -2.1303 -0.0020 34 1 3.1093 -3.6464 -0.2149 35 1 2.8448 -5.7065 -1.6118 36 1 1.4937 -6.8495 -1.2033 37 1 4.4776 -5.8580 1.5527 38 1 0.8000 -6.4421 1.3731 39 1 1.8618 -5.1292 2.0437 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_9599494.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:36 Heat of formation + Delta-G solvation = -61.182382 kcal Electronic energy + Delta-G solvation = -22353.211397 eV Core-core repulsion = 19035.221326 eV Total energy + Delta-G solvation = -3317.990071 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 278.135 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -41.74657 -40.73603 -39.37303 -37.70391 -36.16844 -34.40945 -34.31819 -32.81414 -29.27866 -28.53513 -26.87213 -25.84740 -25.22650 -23.64382 -22.48953 -21.00871 -20.52863 -19.24241 -18.31549 -17.51902 -17.38893 -16.60476 -16.49102 -16.30625 -16.25168 -15.74669 -15.56015 -15.27975 -14.86326 -14.57854 -14.51542 -13.97936 -13.95683 -13.72981 -13.53046 -13.32005 -13.04130 -12.84469 -12.70546 -12.58956 -12.47109 -12.37587 -11.91822 -11.74515 -11.55338 -10.83890 -10.61210 -10.51211 -10.03111 -9.85143 -9.53445 -5.00985 -0.16017 0.22052 1.23275 1.52966 1.84127 1.92289 2.10864 2.72018 2.92244 3.33843 3.39196 3.50577 3.60716 3.68130 3.73399 3.77543 3.88139 4.02342 4.19369 4.25720 4.48687 4.56478 4.56685 4.57900 4.61132 4.69102 4.72933 4.78353 4.80987 4.88731 4.91895 4.95815 4.99750 5.11070 5.16308 5.34348 5.51936 5.57243 5.66644 5.86742 6.35061 6.46437 6.60312 7.28710 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.008 4.008 3 C -0.133 4.133 4 C -0.024 4.024 5 C -0.129 4.129 6 C -0.135 4.135 7 C -0.070 4.070 8 O -0.527 6.527 9 Si 0.678 3.322 10 C -0.079 4.079 11 C -0.146 4.146 12 C 0.561 3.439 13 O -0.530 6.530 14 N -0.705 5.705 15 C 0.126 3.874 16 H 0.106 0.894 17 C -0.142 4.142 18 C 0.076 3.924 19 H 0.072 0.928 20 O -0.555 6.555 21 C -0.186 4.186 22 H 0.077 0.923 23 H 0.060 0.940 24 H 0.096 0.904 25 H 0.132 0.868 26 H 0.077 0.923 27 H 0.069 0.931 28 H 0.083 0.917 29 H 0.119 0.881 30 H 0.376 0.624 31 H -0.254 1.254 32 H -0.253 1.253 33 H 0.130 0.870 34 H 0.406 0.594 35 H 0.084 0.916 36 H 0.111 0.889 37 H 0.384 0.616 38 H 0.100 0.900 39 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.362 -2.130 -1.223 2.808 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.010 4.010 3 C -0.151 4.151 4 C -0.024 4.024 5 C -0.185 4.185 6 C -0.135 4.135 7 C -0.180 4.180 8 O -0.333 6.333 9 Si 0.579 3.421 10 C -0.097 4.097 11 C -0.149 4.149 12 C 0.350 3.650 13 O -0.408 6.408 14 N -0.357 5.357 15 C 0.020 3.980 16 H 0.124 0.876 17 C -0.180 4.180 18 C 0.017 3.983 19 H 0.090 0.910 20 O -0.361 6.361 21 C -0.225 4.225 22 H 0.095 0.905 23 H 0.079 0.921 24 H 0.115 0.885 25 H 0.150 0.850 26 H 0.095 0.905 27 H 0.088 0.912 28 H 0.102 0.898 29 H 0.137 0.863 30 H 0.224 0.776 31 H -0.179 1.179 32 H -0.178 1.178 33 H 0.147 0.853 34 H 0.243 0.757 35 H 0.103 0.897 36 H 0.129 0.871 37 H 0.233 0.767 38 H 0.118 0.882 39 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.099 -2.111 -1.813 2.992 hybrid contribution 0.463 -0.110 1.772 1.835 sum 1.561 -2.221 -0.041 2.716 Atomic orbital electron populations 1.21120 0.89703 1.03322 1.03812 1.20103 0.97004 0.91276 0.92567 1.21040 0.93408 0.97817 1.02870 1.20005 0.93398 0.95140 0.93849 1.21003 1.01195 0.93370 1.02943 1.19971 0.96020 0.92722 1.04837 1.24935 0.91645 1.13044 0.88404 1.86592 1.76105 1.54219 1.16410 0.94965 0.81212 0.75054 0.90838 1.21248 0.93370 0.97749 0.97379 1.19608 0.93046 0.93165 1.09060 1.18263 0.87071 0.83597 0.76105 1.90736 1.13658 1.87102 1.49317 1.45622 1.11202 1.04737 1.74143 1.21751 0.97371 0.82636 0.96253 0.87577 1.23464 0.99319 0.98634 0.96598 1.22814 0.83933 0.94723 0.96863 0.90963 1.86356 1.37454 1.68864 1.43436 1.24148 0.99450 1.00291 0.98602 0.90471 0.92125 0.88527 0.84965 0.90481 0.91166 0.89788 0.86339 0.77647 1.17911 1.17776 0.85294 0.75725 0.89708 0.87092 0.76734 0.88155 0.90501 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.27 8.73 36.01 0.31 0.04 16 2 C -0.01 -0.02 5.91 -104.22 -0.62 -0.64 16 3 C -0.13 -0.15 9.31 -39.64 -0.37 -0.52 16 4 C -0.02 -0.02 5.89 -104.53 -0.62 -0.63 16 5 C -0.13 0.08 9.31 36.01 0.34 0.41 16 6 C -0.14 -0.05 5.25 -104.68 -0.55 -0.60 16 7 C -0.07 0.03 1.88 36.00 0.07 0.10 16 8 O -0.53 -0.32 11.92 -35.23 -0.42 -0.74 16 9 Si 0.68 -0.73 30.24 -169.99 -5.14 -5.88 16 10 C -0.08 -0.05 8.13 -39.19 -0.32 -0.37 16 11 C -0.15 -0.34 5.87 -104.97 -0.62 -0.96 16 12 C 0.56 1.86 7.70 -12.33 -0.09 1.76 16 13 O -0.53 -3.09 12.95 5.32 0.07 -3.03 16 14 N -0.70 -0.82 5.10 -53.96 -0.28 -1.10 16 15 C 0.13 0.03 4.32 -67.11 -0.29 -0.26 16 16 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 17 C -0.14 0.24 7.66 -25.92 -0.20 0.04 16 18 C 0.08 -0.13 5.28 -25.92 -0.14 -0.27 16 19 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 20 O -0.55 0.70 12.31 -35.23 -0.43 0.27 16 21 C -0.19 0.17 7.71 -25.92 -0.20 -0.03 16 22 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 23 H 0.06 0.03 8.04 -51.93 -0.42 -0.39 16 24 H 0.10 0.36 5.87 -51.93 -0.30 0.06 16 25 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 26 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.07 -0.08 8.08 -51.93 -0.42 -0.50 16 28 H 0.08 0.01 6.18 -51.93 -0.32 -0.31 16 29 H 0.12 -0.15 7.37 -51.93 -0.38 -0.53 16 30 H 0.38 -0.71 8.70 45.56 0.40 -0.31 16 31 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 32 H -0.25 -0.06 6.68 56.52 0.38 0.32 16 33 H 0.13 -0.09 3.25 -52.49 -0.17 -0.26 16 34 H 0.41 0.06 5.66 -40.82 -0.23 -0.18 16 35 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 36 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 37 H 0.38 -1.70 9.12 45.56 0.42 -1.29 16 38 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 LS Contribution 314.07 15.07 4.73 4.73 Total: 0.00 -6.46 314.07 -9.18 -15.65 By element: Atomic # 1 Polarization: -3.56 SS G_CDS: -4.43 Total: -7.99 kcal Atomic # 6 Polarization: 1.37 SS G_CDS: -3.29 Total: -1.92 kcal Atomic # 7 Polarization: -0.82 SS G_CDS: -0.28 Total: -1.10 kcal Atomic # 8 Polarization: -2.72 SS G_CDS: -0.78 Total: -3.50 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.14 Total: -5.88 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -6.46 -9.18 -15.65 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_9599494.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.534 kcal (2) G-P(sol) polarization free energy of solvation -6.465 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.999 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.648 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.182 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds