Wall clock time and date at job start Sun Mar 7 2021 22:03:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37939 * 120.06977 * 2 1 4 4 C 1.38381 * 120.14309 * 180.27733 * 3 2 1 5 5 C 1.50701 * 119.85832 * 179.72019 * 4 3 2 6 6 C 1.38339 * 120.29265 * 359.73883 * 4 3 2 7 7 C 1.50698 * 119.92761 * 180.02562 * 6 4 3 8 8 O 1.42894 * 109.47562 * 75.02190 * 7 6 4 9 9 Si 1.86299 * 109.47017 * 195.02200 * 7 6 4 10 10 C 1.37973 * 120.14538 * 0.02562 * 6 4 3 11 11 C 1.39556 * 119.85408 * 359.97438 * 10 6 4 12 12 C 1.47848 * 120.14940 * 179.97438 * 11 10 6 13 13 O 1.21548 * 120.00293 * 173.75486 * 12 11 10 14 14 N 1.34778 * 119.99523 * 353.75615 * 12 11 10 15 15 C 1.46502 * 119.99556 * 179.97438 * 14 12 11 16 16 H 1.08993 * 112.90769 * 23.75124 * 15 14 12 17 17 C 1.53786 * 113.61223 * 155.00039 * 15 14 12 18 18 C 1.53780 * 87.08219 * 89.11513 * 17 15 14 19 19 H 1.08994 * 113.61450 * 140.06983 * 18 17 15 20 20 O 1.42900 * 113.61461 * 270.88513 * 18 17 15 21 21 C 1.53779 * 87.07982 * 25.43327 * 18 17 15 22 22 H 1.08997 * 109.47045 * 263.62477 * 1 2 3 23 23 H 1.09000 * 109.46986 * 23.62572 * 1 2 3 24 24 H 1.08997 * 109.46478 * 143.62731 * 1 2 3 25 25 H 1.07995 * 119.93290 * 0.03485 * 3 2 1 26 26 H 1.09002 * 109.46834 * 270.02536 * 5 4 3 27 27 H 1.09006 * 109.46679 * 30.01360 * 5 4 3 28 28 H 1.08993 * 109.47756 * 150.01880 * 5 4 3 29 29 H 1.09000 * 109.46988 * 315.01837 * 7 6 4 30 30 H 0.96697 * 114.00578 * 59.99573 * 8 7 6 31 31 H 1.48500 * 110.00172 * 179.97438 * 9 7 6 32 32 H 1.48504 * 109.99955 * 301.31263 * 9 7 6 33 33 H 1.08000 * 120.07727 * 179.97438 * 10 6 4 34 34 H 0.96996 * 120.00379 * 359.97438 * 14 12 11 35 35 H 1.09001 * 113.61289 * 334.56862 * 17 15 14 36 36 H 1.08996 * 113.69209 * 203.67914 * 17 15 14 37 37 H 0.96702 * 113.99765 * 179.97438 * 20 18 17 38 38 H 1.08995 * 113.61875 * 89.11746 * 21 18 17 39 39 H 1.09000 * 113.61451 * 220.01936 * 21 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1955 -0.0058 5 6 4.3306 2.5035 -0.0121 6 6 4.2813 0.0019 -0.0062 7 6 5.7882 0.0135 -0.0119 8 8 6.2669 0.3678 1.2870 9 14 6.4205 -1.6790 -0.4663 10 6 3.6022 -1.1991 -0.0013 11 6 2.2066 -1.2080 0.0046 12 6 1.4723 -2.4912 0.0092 13 8 0.2627 -2.4988 0.1288 14 7 2.1441 -3.6525 -0.1191 15 6 1.4165 -4.9240 -0.1139 16 1 0.3734 -4.8171 -0.4113 17 6 2.1528 -6.0581 -0.8465 18 6 2.8305 -6.3792 0.4961 19 1 2.9301 -7.4471 0.6904 20 8 4.0469 -5.6605 0.7097 21 6 1.6089 -5.7387 1.1761 22 1 -0.3633 -0.1141 1.0213 23 1 -0.3633 0.9415 -0.4119 24 1 -0.3632 -0.8275 -0.6094 25 1 1.6582 2.1290 0.0006 26 1 4.5063 2.8165 -1.0414 27 1 3.7408 3.2621 0.5026 28 1 5.2857 2.3780 0.4977 29 1 6.1432 0.7417 -0.7411 30 1 5.9889 -0.2381 1.9875 31 1 7.9054 -1.6808 -0.4762 32 1 5.9174 -2.6861 0.5022 33 1 4.1492 -2.1303 -0.0020 34 1 3.1093 -3.6464 -0.2149 35 1 2.8448 -5.7065 -1.6118 36 1 1.4937 -6.8495 -1.2033 37 1 4.4776 -5.8580 1.5527 38 1 0.8000 -6.4421 1.3731 39 1 1.8618 -5.1292 2.0437 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_9599494.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:35 Heat of formation + Delta-G solvation = -60.595069 kcal Electronic energy + Delta-G solvation = -22353.185929 eV Core-core repulsion = 19035.221326 eV Total energy + Delta-G solvation = -3317.964603 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 278.135 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.84611 -40.72148 -39.46684 -37.74160 -36.13075 -34.49661 -34.38561 -32.86892 -29.36074 -28.56539 -26.77112 -25.86642 -25.23224 -23.69379 -22.55689 -21.12208 -20.50057 -19.28449 -18.22147 -17.56328 -17.47104 -16.63616 -16.46168 -16.39488 -16.30358 -15.81625 -15.61012 -15.26021 -14.91251 -14.61522 -14.57913 -14.04815 -13.97325 -13.64759 -13.56032 -13.32984 -13.07731 -12.88107 -12.74289 -12.60490 -12.52496 -12.32043 -11.96473 -11.80091 -11.46352 -10.79622 -10.66712 -10.59511 -10.15942 -9.91710 -9.61854 -4.94903 -0.27204 0.15058 1.27668 1.55806 1.69250 1.92197 2.02856 2.61156 3.10348 3.39432 3.45944 3.48315 3.59697 3.67185 3.74574 3.82094 3.84934 4.12787 4.16106 4.22578 4.49671 4.54120 4.57384 4.66832 4.71178 4.72069 4.75408 4.80619 4.81834 4.86196 4.90271 4.97091 5.03506 5.04606 5.16057 5.27145 5.46846 5.48675 5.57546 5.80015 6.44288 6.45973 6.79283 7.11822 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.024 4.024 3 C -0.136 4.136 4 C -0.027 4.027 5 C -0.126 4.126 6 C -0.134 4.134 7 C -0.074 4.074 8 O -0.541 6.541 9 Si 0.745 3.255 10 C -0.075 4.075 11 C -0.161 4.161 12 C 0.555 3.445 13 O -0.564 6.564 14 N -0.696 5.696 15 C 0.109 3.891 16 H 0.090 0.910 17 C -0.135 4.135 18 C 0.081 3.919 19 H 0.091 0.909 20 O -0.570 6.570 21 C -0.183 4.183 22 H 0.067 0.933 23 H 0.076 0.924 24 H 0.077 0.923 25 H 0.148 0.852 26 H 0.089 0.911 27 H 0.076 0.924 28 H 0.078 0.922 29 H 0.129 0.871 30 H 0.385 0.615 31 H -0.297 1.297 32 H -0.269 1.269 33 H 0.140 0.860 34 H 0.411 0.589 35 H 0.081 0.919 36 H 0.129 0.871 37 H 0.397 0.603 38 H 0.111 0.889 39 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.164 -2.227 -1.464 3.433 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.026 4.026 3 C -0.153 4.153 4 C -0.028 4.028 5 C -0.182 4.182 6 C -0.134 4.134 7 C -0.183 4.183 8 O -0.349 6.349 9 Si 0.650 3.350 10 C -0.093 4.093 11 C -0.164 4.164 12 C 0.344 3.656 13 O -0.445 6.445 14 N -0.348 5.348 15 C 0.004 3.996 16 H 0.108 0.892 17 C -0.173 4.173 18 C 0.022 3.978 19 H 0.108 0.892 20 O -0.378 6.378 21 C -0.222 4.222 22 H 0.086 0.914 23 H 0.095 0.905 24 H 0.096 0.904 25 H 0.166 0.834 26 H 0.108 0.892 27 H 0.095 0.905 28 H 0.096 0.904 29 H 0.147 0.853 30 H 0.234 0.766 31 H -0.225 1.225 32 H -0.195 1.195 33 H 0.158 0.842 34 H 0.249 0.751 35 H 0.100 0.900 36 H 0.147 0.853 37 H 0.248 0.752 38 H 0.130 0.870 39 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 1.910 -2.222 -2.047 3.574 hybrid contribution 0.262 -0.074 1.872 1.892 sum 2.172 -2.297 -0.175 3.166 Atomic orbital electron populations 1.21018 0.90058 1.03360 1.02956 1.20230 0.97021 0.91887 0.93414 1.21214 0.93733 0.97931 1.02470 1.20249 0.93422 0.95910 0.93190 1.21014 1.00714 0.92749 1.03758 1.20080 0.96471 0.92531 1.04324 1.25076 0.90972 1.13906 0.88361 1.86570 1.76290 1.54978 1.17054 0.94170 0.77654 0.73585 0.89621 1.21316 0.92703 0.98441 0.96870 1.19671 0.93775 0.92817 1.10176 1.18516 0.86820 0.84449 0.75776 1.90715 1.15003 1.87610 1.51172 1.45605 1.11411 1.04652 1.73105 1.21946 0.96865 0.82884 0.97946 0.89213 1.23503 0.99197 0.98019 0.96573 1.22815 0.83331 0.95444 0.96191 0.89159 1.86321 1.37638 1.69284 1.44550 1.24154 1.00551 1.00117 0.97347 0.91405 0.90492 0.90409 0.83438 0.89211 0.90506 0.90360 0.85316 0.76557 1.22476 1.19462 0.84228 0.75104 0.90001 0.85259 0.75239 0.87026 0.91922 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.70 8.73 71.24 0.62 -0.08 16 2 C -0.02 -0.14 5.91 -19.61 -0.12 -0.25 16 3 C -0.14 -0.28 9.31 22.23 0.21 -0.08 16 4 C -0.03 -0.03 5.89 -19.81 -0.12 -0.14 16 5 C -0.13 0.28 9.31 71.24 0.66 0.95 16 6 C -0.13 -0.05 5.25 -19.90 -0.10 -0.16 16 7 C -0.07 0.12 1.88 71.24 0.13 0.25 16 8 O -0.54 -0.40 11.92 -148.98 -1.78 -2.18 16 9 Si 0.74 -1.79 30.24 68.60 2.07 0.28 16 10 C -0.08 -0.11 8.13 22.53 0.18 0.07 16 11 C -0.16 -0.94 5.87 -20.09 -0.12 -1.06 16 12 C 0.56 4.66 7.70 86.79 0.67 5.33 16 13 O -0.56 -8.03 12.95 -3.87 -0.05 -8.08 16 14 N -0.70 -2.41 5.10 -442.90 -2.26 -4.67 16 15 C 0.11 0.16 4.32 45.52 0.20 0.36 16 16 H 0.09 0.42 7.46 -2.39 -0.02 0.40 16 17 C -0.14 0.49 7.66 31.12 0.24 0.73 16 18 C 0.08 -0.35 5.28 31.12 0.16 -0.18 16 19 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 20 O -0.57 1.74 12.31 -148.98 -1.83 -0.09 16 21 C -0.18 0.28 7.71 31.12 0.24 0.52 16 22 H 0.07 0.49 8.14 -2.39 -0.02 0.47 16 23 H 0.08 0.13 8.04 -2.39 -0.02 0.12 16 24 H 0.08 0.78 5.87 -2.39 -0.01 0.76 16 25 H 0.15 -0.25 8.06 -2.91 -0.02 -0.27 16 26 H 0.09 -0.42 8.14 -2.39 -0.02 -0.43 16 27 H 0.08 -0.26 8.08 -2.38 -0.02 -0.28 16 28 H 0.08 -0.05 6.18 -2.39 -0.01 -0.06 16 29 H 0.13 -0.46 7.37 -2.39 -0.02 -0.48 16 30 H 0.39 -1.58 8.70 -74.06 -0.64 -2.23 16 31 H -0.30 -1.47 7.11 99.48 0.71 -0.77 16 32 H -0.27 -0.03 6.68 99.48 0.66 0.64 16 33 H 0.14 -0.20 3.25 -2.91 -0.01 -0.21 16 34 H 0.41 0.34 5.66 -92.71 -0.53 -0.18 16 35 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 36 H 0.13 -0.97 8.14 -2.39 -0.02 -0.99 16 37 H 0.40 -3.74 9.12 -74.06 -0.68 -4.42 16 38 H 0.11 -0.45 8.14 -2.39 -0.02 -0.47 16 39 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 Total: 0.00 -16.02 314.07 -1.73 -17.75 By element: Atomic # 1 Polarization: -8.53 SS G_CDS: -0.74 Total: -9.28 kcal Atomic # 6 Polarization: 3.40 SS G_CDS: 2.86 Total: 6.26 kcal Atomic # 7 Polarization: -2.41 SS G_CDS: -2.26 Total: -4.67 kcal Atomic # 8 Polarization: -6.69 SS G_CDS: -3.66 Total: -10.35 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: 2.07 Total: 0.28 kcal Total: -16.02 -1.73 -17.75 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_9599494.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.843 kcal (2) G-P(sol) polarization free energy of solvation -16.024 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.867 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.728 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.595 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds