Wall clock time and date at job start Sun Mar 7 2021 22:03:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36773 * 125.79779 * 2 1 4 4 C 1.47259 * 126.94514 * 0.07123 * 3 2 1 5 5 O 1.21633 * 120.00027 * 0.02562 * 4 3 2 6 6 N 1.34775 * 120.00317 * 180.02562 * 4 3 2 7 7 C 1.46498 * 120.00370 * 180.02562 * 6 4 3 8 8 H 1.09001 * 112.84812 * 23.79816 * 7 6 4 9 9 C 1.53779 * 113.61908 * 154.99741 * 7 6 4 10 10 C 1.53783 * 87.08181 * 139.97818 * 9 7 6 11 11 H 1.09004 * 113.60727 * 89.20444 * 10 9 7 12 12 O 1.42897 * 113.61548 * 220.01940 * 10 9 7 13 13 C 1.53777 * 113.61484 * 252.49867 * 7 6 4 14 14 C 1.46696 * 106.11272 * 179.79840 * 3 2 1 15 15 C 1.34482 * 106.33105 * 0.39048 * 14 3 2 16 16 C 1.50693 * 125.57124 * 179.86309 * 15 14 3 17 17 O 1.42907 * 109.47661 * 299.72381 * 16 15 14 18 18 Si 1.86298 * 109.47618 * 179.72071 * 16 15 14 19 19 N 1.34653 * 125.80485 * 180.02562 * 2 1 3 20 20 H 1.09004 * 109.46807 * 269.98363 * 1 2 3 21 21 H 1.08989 * 109.47373 * 29.97889 * 1 2 3 22 22 H 1.09000 * 109.47028 * 149.98514 * 1 2 3 23 23 H 0.97002 * 119.99754 * 359.97438 * 6 4 3 24 24 H 1.08996 * 113.61861 * 254.53029 * 9 7 6 25 25 H 1.09002 * 113.61226 * 25.35140 * 9 7 6 26 26 H 0.96703 * 114.00165 * 180.02562 * 12 10 9 27 27 H 1.09003 * 113.61394 * 334.56438 * 13 7 6 28 28 H 1.09005 * 113.62046 * 105.46414 * 13 7 6 29 29 H 1.08001 * 126.83147 * 180.25445 * 14 3 2 30 30 H 1.09000 * 109.46936 * 59.72004 * 16 15 14 31 31 H 0.96697 * 114.00527 * 179.97438 * 17 16 15 32 32 H 1.48506 * 109.99834 * 298.68714 * 18 16 15 33 33 H 1.48502 * 110.00011 * 59.99978 * 18 16 15 34 34 H 0.96997 * 124.85140 * 359.96211 * 19 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5156 0.0015 5 8 0.6838 2.7839 0.0033 6 7 2.7848 3.5055 0.0007 7 6 2.3503 4.9045 0.0028 8 1 1.3477 5.0357 0.4100 9 6 3.3880 5.8712 0.5973 10 6 3.0044 6.8492 -0.5257 11 1 2.1813 7.5140 -0.2634 12 8 4.1206 7.5427 -1.0869 13 6 2.5698 5.6197 -1.3408 14 6 3.6882 0.6152 0.0050 15 6 3.6096 -0.7273 -0.0013 16 6 4.7819 -1.6741 -0.0023 17 8 5.5756 -1.4485 -1.1691 18 14 4.1617 -3.4308 -0.0034 19 7 2.2947 -1.0921 -0.0005 20 1 -0.3633 -0.0003 1.0277 21 1 -0.3633 0.8901 -0.5134 22 1 -0.3633 -0.8898 -0.5141 23 1 3.7310 3.2915 -0.0004 24 1 3.1309 6.2286 1.5944 25 1 4.4131 5.5069 0.5295 26 1 3.8856 8.1597 -1.7935 27 1 3.3714 5.1874 -1.9397 28 1 1.6521 5.7742 -1.9084 29 1 4.5890 1.2111 0.0101 30 1 5.3877 -1.5032 0.8876 31 1 6.3497 -2.0241 -1.2357 32 1 3.3613 -3.6875 1.2209 33 1 3.3343 -3.6765 -1.2118 34 1 1.9735 -2.0073 -0.0004 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_9865296.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:03:42 Heat of formation + Delta-G solvation = -43.890841 kcal Electronic energy + Delta-G solvation = -18571.784727 eV Core-core repulsion = 15472.882322 eV Total energy + Delta-G solvation = -3098.902405 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -42.48655 -40.82048 -39.18354 -37.79729 -36.25157 -33.90726 -32.89820 -31.94090 -29.04709 -26.75082 -26.20141 -24.78591 -22.88120 -21.50436 -21.12369 -20.21195 -18.72653 -18.62853 -18.09883 -17.15270 -16.75101 -16.28035 -16.03292 -15.80767 -15.28725 -15.24728 -14.70620 -14.48957 -14.43207 -14.17253 -13.80127 -13.53248 -13.47688 -13.43406 -12.94815 -12.62233 -12.47110 -12.21588 -12.19004 -11.68660 -10.88106 -10.69216 -10.48148 -9.99541 -9.77768 -9.13257 -5.32084 0.76494 0.97475 1.19824 1.40881 1.64416 1.88747 2.41511 2.64937 3.27802 3.33086 3.49807 3.66089 3.69069 3.82234 3.85919 3.92451 4.11604 4.16609 4.28091 4.48220 4.55288 4.67726 4.74087 4.74933 4.75771 4.94685 4.97177 5.02280 5.16092 5.29743 5.65250 5.72365 5.86317 6.24981 6.48010 6.67988 6.73477 7.48618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.123 3.877 3 C -0.241 4.241 4 C 0.596 3.404 5 O -0.549 6.549 6 N -0.715 5.715 7 C 0.127 3.873 8 H 0.119 0.881 9 C -0.137 4.137 10 C 0.079 3.921 11 H 0.087 0.913 12 O -0.559 6.559 13 C -0.183 4.183 14 C -0.122 4.122 15 C 0.013 3.987 16 C -0.039 4.039 17 O -0.542 6.542 18 Si 0.682 3.318 19 N -0.551 5.551 20 H 0.082 0.918 21 H 0.106 0.894 22 H 0.065 0.935 23 H 0.402 0.598 24 H 0.082 0.918 25 H 0.095 0.905 26 H 0.381 0.619 27 H 0.093 0.907 28 H 0.075 0.925 29 H 0.149 0.851 30 H 0.086 0.914 31 H 0.385 0.615 32 H -0.252 1.252 33 H -0.250 1.250 34 H 0.409 0.591 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.446 -3.289 0.733 4.820 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.005 3.995 3 C -0.250 4.250 4 C 0.386 3.614 5 O -0.428 6.428 6 N -0.365 5.365 7 C 0.022 3.978 8 H 0.137 0.863 9 C -0.175 4.175 10 C 0.019 3.981 11 H 0.105 0.895 12 O -0.364 6.364 13 C -0.222 4.222 14 C -0.146 4.146 15 C -0.095 4.095 16 C -0.151 4.151 17 O -0.349 6.349 18 Si 0.583 3.417 19 N -0.151 5.151 20 H 0.100 0.900 21 H 0.124 0.876 22 H 0.084 0.916 23 H 0.237 0.763 24 H 0.101 0.899 25 H 0.114 0.886 26 H 0.228 0.772 27 H 0.112 0.888 28 H 0.093 0.907 29 H 0.167 0.833 30 H 0.104 0.896 31 H 0.233 0.767 32 H -0.176 1.176 33 H -0.174 1.174 34 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 1.752 -3.670 1.075 4.207 hybrid contribution 0.132 0.206 -0.339 0.418 sum 1.884 -3.465 0.736 4.012 Atomic orbital electron populations 1.20658 0.86443 1.04606 1.03900 1.20420 0.93825 0.85136 1.00094 1.20097 0.93008 0.92018 1.19920 1.17304 0.85273 0.83981 0.74833 1.90743 1.16590 1.84353 1.51133 1.45660 1.09793 1.05191 1.75846 1.22171 0.99568 0.79410 0.96675 0.86296 1.23465 1.00433 0.95164 0.98467 1.23092 0.89113 0.91279 0.94586 0.89515 1.86515 1.33565 1.60227 1.56103 1.24207 1.02674 0.97342 0.97980 1.21773 0.95687 0.92350 1.04825 1.19207 0.83215 0.94461 1.12585 1.23908 0.92748 1.07007 0.91436 1.86508 1.42066 1.64420 1.41862 0.94571 0.87272 0.79155 0.80727 1.41748 1.05678 1.08329 1.59318 0.89962 0.87574 0.91608 0.76296 0.89922 0.88627 0.77152 0.88840 0.90651 0.83325 0.89640 0.76652 1.17636 1.17350 0.75238 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.14 9.88 36.01 0.36 0.21 16 2 C 0.12 0.37 7.17 -81.88 -0.59 -0.22 16 3 C -0.24 -0.90 6.29 -103.35 -0.65 -1.55 16 4 C 0.60 2.66 7.81 -12.60 -0.10 2.56 16 5 O -0.55 -3.88 14.41 5.25 0.08 -3.80 16 6 N -0.71 -1.26 5.35 -54.15 -0.29 -1.55 16 7 C 0.13 0.14 4.24 -67.12 -0.28 -0.14 16 8 H 0.12 0.25 7.46 -51.93 -0.39 -0.14 16 9 C -0.14 0.00 7.66 -25.92 -0.20 -0.19 16 10 C 0.08 -0.01 5.21 -25.92 -0.14 -0.14 16 11 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 12 O -0.56 -0.51 13.67 -35.23 -0.48 -1.00 16 13 C -0.18 -0.10 7.71 -25.92 -0.20 -0.30 16 14 C -0.12 -0.28 10.44 -37.50 -0.39 -0.68 16 15 C 0.01 0.02 6.14 -81.87 -0.50 -0.48 16 16 C -0.04 0.05 2.97 36.00 0.11 0.15 16 17 O -0.54 0.44 12.84 -35.23 -0.45 -0.01 16 18 Si 0.68 -1.73 30.94 -169.99 -5.26 -6.99 16 19 N -0.55 -0.97 5.41 -5.43 -0.03 -1.00 16 20 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 21 H 0.11 0.33 6.47 -51.94 -0.34 -0.01 16 22 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 23 H 0.40 -0.04 7.85 -40.82 -0.32 -0.36 16 24 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 25 H 0.10 0.01 8.12 -51.93 -0.42 -0.41 16 26 H 0.38 -1.15 9.12 45.56 0.42 -0.73 16 27 H 0.09 0.11 8.14 -51.93 -0.42 -0.31 16 28 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.15 0.06 7.70 -52.49 -0.40 -0.35 16 30 H 0.09 -0.25 7.96 -51.93 -0.41 -0.67 16 31 H 0.39 -2.30 8.74 45.56 0.40 -1.90 16 32 H -0.25 0.09 7.11 56.52 0.40 0.49 16 33 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 34 H 0.41 -0.01 6.70 -40.82 -0.27 -0.29 16 LS Contribution 291.34 15.07 4.39 4.39 Total: 0.00 -9.26 291.34 -8.11 -17.37 By element: Atomic # 1 Polarization: -3.16 SS G_CDS: -3.48 Total: -6.63 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -2.59 Total: -0.78 kcal Atomic # 7 Polarization: -2.24 SS G_CDS: -0.32 Total: -2.56 kcal Atomic # 8 Polarization: -3.95 SS G_CDS: -0.86 Total: -4.80 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: -5.26 Total: -6.99 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -9.26 -8.11 -17.37 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_9865296.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.522 kcal (2) G-P(sol) polarization free energy of solvation -9.260 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.109 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.369 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.891 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds