Wall clock time and date at job start Mon Mar 8 2021 00:19:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35449 * 125.56421 * 2 1 4 4 C 1.50700 * 126.06973 * 0.02562 * 3 2 1 5 5 O 1.42902 * 109.47407 * 128.27072 * 4 3 2 6 6 Si 1.86305 * 109.46677 * 248.26762 * 4 3 2 7 7 H 1.48503 * 109.47073 * 66.02564 * 6 4 3 8 8 H 1.48498 * 109.46784 * 186.02176 * 6 4 3 9 9 H 1.48493 * 109.47278 * 306.02292 * 6 4 3 10 10 C 1.39842 * 107.86468 * 179.97438 * 3 2 1 11 11 C 1.50698 * 126.45688 * 179.97438 * 10 3 2 12 12 C 1.37877 * 107.08309 * 359.97438 * 10 3 2 13 13 C 1.46672 * 126.23191 * 180.02562 * 12 10 3 14 14 O 1.21700 * 119.99983 * 359.97438 * 13 12 10 15 15 N 1.34773 * 119.99962 * 180.02562 * 13 12 10 16 16 C 1.46507 * 120.00219 * 179.97438 * 15 13 12 17 17 C 1.52991 * 109.47379 * 180.02562 * 16 15 13 18 18 Si 1.86297 * 109.47326 * 180.02562 * 17 16 15 19 19 C 1.86301 * 109.47370 * 59.99726 * 18 17 16 20 20 C 1.86301 * 109.47433 * 179.97438 * 18 17 16 21 21 C 1.86300 * 109.46948 * 299.99866 * 18 17 16 22 22 N 1.35537 * 125.56031 * 179.69019 * 2 1 3 23 23 H 1.08997 * 109.47032 * 83.53783 * 1 2 3 24 24 H 1.09005 * 109.47037 * 323.54442 * 1 2 3 25 25 H 1.08998 * 109.47013 * 203.54287 * 1 2 3 26 26 H 1.08999 * 109.46991 * 8.26112 * 4 3 2 27 27 H 0.96697 * 113.99765 * 59.99745 * 5 4 3 28 28 H 1.09002 * 109.46772 * 95.65699 * 11 10 3 29 29 H 1.08995 * 109.47013 * 215.64928 * 11 10 3 30 30 H 1.08999 * 109.47323 * 335.65171 * 11 10 3 31 31 H 0.96998 * 120.00362 * 0.02562 * 15 13 12 32 32 H 1.09003 * 109.47043 * 300.00388 * 16 15 13 33 33 H 1.09005 * 109.46792 * 59.99567 * 16 15 13 34 34 H 1.09007 * 109.47239 * 299.99682 * 17 16 15 35 35 H 1.08995 * 109.47747 * 59.99998 * 17 16 15 36 36 H 1.08999 * 109.47110 * 59.99735 * 19 18 17 37 37 H 1.08997 * 109.47718 * 180.02562 * 19 18 17 38 38 H 1.09007 * 109.47026 * 300.00027 * 19 18 17 39 39 H 1.09002 * 109.46840 * 60.00221 * 20 18 17 40 40 H 1.09000 * 109.47203 * 179.97438 * 20 18 17 41 41 H 1.08995 * 109.47259 * 299.99934 * 20 18 17 42 42 H 1.08999 * 109.47056 * 59.99850 * 21 18 17 43 43 H 1.09006 * 109.47201 * 179.97438 * 21 18 17 44 44 H 1.09002 * 109.47354 * 299.99796 * 21 18 17 45 45 H 0.96994 * 125.68040 * 359.96942 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8200 2.5321 0.0005 5 8 2.4622 3.2469 1.0582 6 14 2.2410 3.3267 -1.6311 7 1 1.4604 2.6766 -2.7143 8 1 1.9058 4.7724 -1.5786 9 1 3.6922 3.1644 -1.9009 10 6 3.6270 0.6767 0.0006 11 6 4.8486 1.5591 0.0003 12 6 3.6122 -0.7020 0.0015 13 6 4.7859 -1.5816 0.0029 14 8 5.9049 -1.1031 0.0029 15 7 4.6252 -2.9197 0.0032 16 6 5.7975 -3.7984 0.0041 17 6 5.3406 -5.2584 0.0036 18 14 6.8314 -6.3757 0.0054 19 6 7.8533 -6.0453 1.5277 20 6 6.2750 -8.1537 0.0057 21 6 7.8567 -6.0455 -1.5145 22 7 2.2952 -1.1026 0.0060 23 1 -0.3633 0.1157 -1.0211 24 1 -0.3633 0.8266 0.6107 25 1 -0.3633 -0.9421 0.4105 26 1 0.7403 2.5564 0.1486 27 1 3.4266 3.2664 0.9908 28 1 5.2022 1.6904 1.0230 29 1 5.6322 1.0945 -0.5982 30 1 4.5950 2.5305 -0.4241 31 1 3.7333 -3.3011 0.0021 32 1 6.3969 -3.6053 -0.8857 33 1 6.3960 -3.6047 0.8943 34 1 4.7410 -5.4519 0.8932 35 1 4.7424 -5.4518 -0.8868 36 1 7.2533 -6.2384 2.4170 37 1 8.7257 -6.6986 1.5286 38 1 8.1789 -5.0050 1.5280 39 1 5.6769 -8.3473 -0.8848 40 1 7.1472 -8.8074 0.0063 41 1 5.6753 -8.3467 0.8951 42 1 8.1823 -5.0052 -1.5142 43 1 8.7293 -6.6989 -1.5133 44 1 7.2589 -6.2388 -2.4052 45 1 1.9833 -2.0210 0.0113 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9043546_12297754.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 00:19:22 Heat of formation + Delta-G solvation = -90.297969 kcal Electronic energy + Delta-G solvation = -22380.379259 eV Core-core repulsion = 19135.090862 eV Total energy + Delta-G solvation = -3245.288396 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 298.163 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.62611 -40.11934 -37.72514 -36.32599 -33.68933 -33.17383 -31.42415 -29.50575 -29.32299 -28.51874 -28.48302 -27.33710 -26.29965 -23.70326 -22.30774 -20.84168 -20.17238 -19.27709 -17.77379 -17.01285 -16.74230 -16.62309 -15.99454 -15.63018 -15.55507 -14.82043 -14.72576 -14.39232 -14.33891 -14.23896 -14.08867 -14.02348 -13.94167 -13.83827 -13.74152 -13.38404 -13.34240 -13.29432 -13.22337 -13.16936 -12.96688 -12.64854 -12.53566 -12.40563 -12.01376 -11.52662 -11.21838 -10.92888 -10.89202 -10.64477 -10.54830 -10.13176 -9.44320 -8.93056 0.45477 1.16611 1.51573 1.52944 1.58123 1.75191 1.76524 1.77286 1.99086 2.12184 2.25703 2.43280 2.57286 3.63613 3.72954 3.79662 3.96926 4.02175 4.07183 4.08910 4.35866 4.43164 4.51377 4.55913 4.59289 4.62632 4.63944 4.68242 4.69083 4.70600 4.73587 4.81771 4.86172 4.96050 5.02150 5.07833 5.17164 5.32012 5.38634 5.41850 5.48834 5.50783 5.72997 5.94313 6.30877 6.51332 6.68001 7.21498 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.077 3.923 3 C -0.209 4.209 4 C -0.039 4.039 5 O -0.541 6.541 6 Si 0.936 3.064 7 H -0.253 1.253 8 H -0.251 1.251 9 H -0.243 1.243 10 C -0.060 4.060 11 C -0.105 4.105 12 C -0.060 4.060 13 C 0.587 3.413 14 O -0.524 6.524 15 N -0.732 5.732 16 C 0.130 3.870 17 C -0.434 4.434 18 Si 1.026 2.974 19 C -0.455 4.455 20 C -0.451 4.451 21 C -0.454 4.454 22 N -0.537 5.537 23 H 0.081 0.919 24 H 0.089 0.911 25 H 0.069 0.931 26 H 0.112 0.888 27 H 0.373 0.627 28 H 0.076 0.924 29 H 0.084 0.916 30 H 0.063 0.937 31 H 0.393 0.607 32 H 0.072 0.928 33 H 0.072 0.928 34 H 0.083 0.917 35 H 0.083 0.917 36 H 0.068 0.932 37 H 0.070 0.930 38 H 0.070 0.930 39 H 0.068 0.932 40 H 0.071 0.929 41 H 0.068 0.932 42 H 0.070 0.930 43 H 0.070 0.930 44 H 0.068 0.932 45 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.449 -4.231 -0.803 5.517 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.041 4.041 3 C -0.216 4.216 4 C -0.151 4.151 5 O -0.347 6.347 6 Si 0.758 3.242 7 H -0.176 1.176 8 H -0.175 1.175 9 H -0.166 1.166 10 C -0.068 4.068 11 C -0.161 4.161 12 C -0.172 4.172 13 C 0.375 3.625 14 O -0.400 6.400 15 N -0.385 5.385 16 C 0.007 3.993 17 C -0.518 4.518 18 Si 1.221 2.779 19 C -0.562 4.562 20 C -0.559 4.559 21 C -0.562 4.562 22 N -0.134 5.134 23 H 0.100 0.900 24 H 0.108 0.892 25 H 0.088 0.912 26 H 0.130 0.870 27 H 0.221 0.779 28 H 0.094 0.906 29 H 0.103 0.897 30 H 0.082 0.918 31 H 0.226 0.774 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.101 0.899 35 H 0.101 0.899 36 H 0.087 0.913 37 H 0.089 0.911 38 H 0.090 0.910 39 H 0.087 0.913 40 H 0.090 0.910 41 H 0.088 0.912 42 H 0.090 0.910 43 H 0.089 0.911 44 H 0.087 0.913 45 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -3.033 -3.587 -1.402 4.903 hybrid contribution -0.310 -1.214 0.243 1.276 sum -3.343 -4.801 -1.160 5.964 Atomic orbital electron populations 1.20523 0.87271 1.03983 1.03674 1.20247 0.93595 0.85448 1.04801 1.19508 0.92593 0.95187 1.14289 1.24236 1.00433 0.89275 1.01107 1.86497 1.24272 1.75083 1.48830 0.85987 0.82146 0.80129 0.75976 1.17647 1.17476 1.16603 1.19697 0.94558 0.91249 1.01307 1.20604 0.94758 0.97563 1.03205 1.20069 0.82863 0.93963 1.20268 1.17051 0.87528 0.81408 0.76503 1.90841 1.24103 1.75074 1.50023 1.46087 1.10083 1.05772 1.76524 1.21086 0.87692 0.87772 1.02708 1.26590 1.16438 1.03461 1.05321 0.78946 0.65545 0.66141 0.67289 1.26192 1.09482 1.05237 1.15273 1.26134 1.06040 1.19305 1.04414 1.26192 1.09518 1.05233 1.15237 1.41818 1.05392 1.08328 1.57842 0.89991 0.89230 0.91184 0.87018 0.77901 0.90560 0.89679 0.91801 0.77375 0.91005 0.90977 0.89856 0.89865 0.91258 0.91073 0.91042 0.91262 0.91013 0.91248 0.91044 0.91072 0.91270 0.74732 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.29 9.98 36.01 0.36 0.65 16 2 C 0.08 -0.01 7.13 -81.95 -0.58 -0.59 16 3 C -0.21 -0.33 4.44 -105.02 -0.47 -0.79 16 4 C -0.04 -0.03 2.84 36.01 0.10 0.07 16 5 O -0.54 -1.07 12.87 -35.23 -0.45 -1.53 16 6 Si 0.94 0.71 26.79 -169.99 -4.55 -3.85 16 7 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 8 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 9 H -0.24 -0.32 5.79 56.52 0.33 0.01 16 10 C -0.06 -0.17 5.87 -104.16 -0.61 -0.78 16 11 C -0.10 -0.22 8.15 36.00 0.29 0.07 16 12 C -0.06 -0.13 7.06 -81.98 -0.58 -0.71 16 13 C 0.59 1.79 7.79 -12.86 -0.10 1.69 16 14 O -0.52 -3.30 14.94 5.19 0.08 -3.22 16 15 N -0.73 0.12 5.55 -61.62 -0.34 -0.22 16 16 C 0.13 -0.09 5.05 -4.04 -0.02 -0.11 16 17 C -0.43 1.41 4.56 37.15 0.17 1.58 16 18 Si 1.03 -3.69 12.19 -169.99 -2.07 -5.76 16 19 C -0.45 0.84 8.65 101.05 0.87 1.72 16 20 C -0.45 1.11 8.65 101.05 0.87 1.99 16 21 C -0.45 0.86 8.65 101.05 0.87 1.73 16 22 N -0.54 0.39 5.99 -5.70 -0.03 0.35 16 23 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 24 H 0.09 -0.29 7.28 -51.93 -0.38 -0.67 16 25 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 26 H 0.11 -0.10 6.68 -51.93 -0.35 -0.45 16 27 H 0.37 -0.06 6.23 45.56 0.28 0.22 16 28 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 29 H 0.08 0.31 6.80 -51.93 -0.35 -0.04 16 30 H 0.06 0.04 4.11 -51.93 -0.21 -0.17 16 31 H 0.39 -1.16 7.60 -40.82 -0.31 -1.47 16 32 H 0.07 -0.01 7.79 -51.93 -0.40 -0.41 16 33 H 0.07 0.00 7.79 -51.93 -0.40 -0.41 16 34 H 0.08 -0.31 7.96 -51.92 -0.41 -0.72 16 35 H 0.08 -0.31 7.96 -51.93 -0.41 -0.73 16 36 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 37 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 38 H 0.07 -0.09 7.79 -51.92 -0.40 -0.50 16 39 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 40 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 41 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 42 H 0.07 -0.09 7.79 -51.93 -0.40 -0.50 16 43 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 44 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 45 H 0.42 -1.65 8.19 -40.82 -0.33 -1.99 16 LS Contribution 361.31 15.07 5.44 5.44 Total: 0.00 -7.80 361.31 -7.88 -15.68 By element: Atomic # 1 Polarization: -6.30 SS G_CDS: -7.13 Total: -13.43 kcal Atomic # 6 Polarization: 5.34 SS G_CDS: 1.19 Total: 6.52 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -0.38 Total: 0.13 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -0.38 Total: -4.74 kcal Atomic # 14 Polarization: -2.98 SS G_CDS: -6.63 Total: -9.61 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -7.80 -7.88 -15.68 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9043546_12297754.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.617 kcal (2) G-P(sol) polarization free energy of solvation -7.803 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.879 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.681 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds