Wall clock time and date at job start Mon Mar 8 2021 00:42:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86300 * 109.46987 * 2 1 4 4 C 1.86301 * 109.47137 * 240.00398 * 2 1 3 5 5 C 1.86299 * 109.47459 * 120.00201 * 2 1 3 6 6 C 1.53006 * 109.46797 * 60.00007 * 5 2 1 7 7 N 1.46500 * 109.46998 * 180.02562 * 6 5 2 8 8 C 1.34769 * 120.00237 * 180.02562 * 7 6 5 9 9 O 1.21573 * 120.00109 * 359.97438 * 8 7 6 10 10 C 1.47697 * 120.00483 * 180.02562 * 8 7 6 11 11 C 1.39624 * 120.15025 * 359.97438 * 10 8 7 12 12 C 1.38106 * 119.84942 * 179.97438 * 11 10 8 13 13 F 1.35102 * 119.91943 * 180.02562 * 12 11 10 14 14 C 1.38618 * 120.16662 * 0.02562 * 12 11 10 15 15 C 1.50701 * 119.84137 * 179.97438 * 14 12 11 16 16 O 1.42910 * 109.46997 * 284.99280 * 15 14 12 17 17 Si 1.86302 * 109.47042 * 165.00030 * 15 14 12 18 18 H 1.48491 * 109.47507 * 59.99417 * 17 15 14 19 19 H 1.48496 * 109.47108 * 179.97438 * 17 15 14 20 20 H 1.48506 * 109.46941 * 299.99449 * 17 15 14 21 21 C 1.38223 * 120.31457 * 0.02562 * 14 12 11 22 22 C 1.38268 * 120.14699 * 359.70630 * 21 14 12 23 23 F 1.35097 * 120.09019 * 180.29692 * 22 21 14 24 24 H 1.09000 * 109.47108 * 299.99496 * 1 2 3 25 25 H 1.08998 * 109.47257 * 60.00281 * 1 2 3 26 26 H 1.09002 * 109.46724 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.47174 * 180.02562 * 3 2 1 28 28 H 1.08992 * 109.47573 * 300.00491 * 3 2 1 29 29 H 1.09000 * 109.46785 * 60.00306 * 3 2 1 30 30 H 1.09002 * 109.47148 * 299.99865 * 4 2 1 31 31 H 1.09001 * 109.47357 * 59.99987 * 4 2 1 32 32 H 1.09004 * 109.47198 * 179.97438 * 4 2 1 33 33 H 1.09000 * 109.47207 * 300.00242 * 5 2 1 34 34 H 1.09001 * 109.47467 * 179.97438 * 5 2 1 35 35 H 1.08993 * 109.46955 * 300.00310 * 6 5 2 36 36 H 1.09000 * 109.47050 * 60.00139 * 6 5 2 37 37 H 0.97010 * 119.99909 * 359.97438 * 7 6 5 38 38 H 1.07999 * 120.07335 * 359.95939 * 11 10 8 39 39 H 1.08995 * 109.47371 * 44.99439 * 15 14 12 40 40 H 0.96705 * 113.99671 * 300.00494 * 16 15 14 41 41 H 1.08001 * 119.93075 * 179.97438 * 21 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8781 -1.5212 5 6 2.4841 -0.8783 1.5211 6 6 1.9741 -2.3208 1.5210 7 7 2.4620 -3.0113 2.7174 8 6 2.1368 -4.3017 2.9304 9 8 1.4382 -4.8927 2.1300 10 6 2.6282 -4.9977 4.1369 11 6 3.4303 -4.3220 5.0586 12 6 3.8859 -4.9787 6.1848 13 9 4.6617 -4.3261 7.0778 14 6 3.5492 -6.3059 6.4014 15 6 4.0509 -7.0155 7.6325 16 8 5.4369 -7.3250 7.4725 17 14 3.0872 -8.5910 7.8772 18 1 3.2647 -9.4689 6.6929 19 1 3.5819 -9.2906 9.0900 20 1 1.6469 -8.2695 8.0436 21 6 2.7564 -6.9817 5.4929 22 6 2.2886 -6.3352 4.3637 23 9 1.5089 -6.9952 3.4796 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 3.5740 1.7565 -0.0005 28 1 2.1206 2.2703 -0.8898 29 1 2.1206 2.2702 0.8900 30 1 2.1207 -1.9058 -1.5213 31 1 2.1207 -0.3643 -2.4112 32 1 3.5741 -0.8777 -1.5214 33 1 2.1208 -0.3645 2.4111 34 1 3.5741 -0.8787 1.5208 35 1 0.8842 -2.3208 1.5209 36 1 2.3374 -2.8346 0.6309 37 1 3.0198 -2.5399 3.3559 38 1 3.6940 -3.2882 4.8910 39 1 3.9206 -6.3711 8.5019 40 1 5.6274 -7.8965 6.7160 41 1 2.4983 -8.0157 5.6675 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9043546_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 00:42:46 Heat of formation + Delta-G solvation = -177.816473 kcal Electronic energy + Delta-G solvation = -24170.742632 eV Core-core repulsion = 20231.026205 eV Total energy + Delta-G solvation = -3939.716426 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 317.117 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -50.08363 -49.98364 -41.25404 -39.89191 -37.72812 -36.37424 -33.67446 -31.41569 -31.33911 -29.48716 -28.50572 -28.47675 -27.78238 -24.54121 -24.36085 -23.12569 -21.82534 -19.73151 -18.82306 -18.63092 -17.94231 -17.35800 -16.98673 -16.79658 -16.61474 -16.42323 -16.34081 -15.96834 -15.61383 -15.26715 -15.02921 -14.80547 -14.54883 -14.34146 -14.14135 -14.02724 -13.87816 -13.76728 -13.37246 -13.29730 -13.27278 -13.15970 -13.04613 -12.94763 -12.54650 -12.40656 -12.31246 -11.97072 -11.38400 -10.91951 -10.88426 -10.77829 -10.66888 -10.63318 -10.16354 -9.81302 -0.82577 -0.35950 0.89815 1.24976 1.36180 1.45070 1.48865 1.75638 1.75835 1.78076 2.09242 2.28498 2.53945 2.76776 2.82633 3.04166 3.16153 3.40355 3.51202 3.70285 3.91786 4.07041 4.07817 4.26136 4.30964 4.48627 4.56351 4.61662 4.64381 4.65113 4.68834 4.69692 4.69877 4.71209 4.73948 4.85210 5.05381 5.28404 5.35845 5.40250 5.49451 5.51402 6.31906 6.32197 7.05001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.455 4.455 2 Si 1.026 2.974 3 C -0.451 4.451 4 C -0.455 4.455 5 C -0.435 4.435 6 C 0.128 3.872 7 N -0.721 5.721 8 C 0.555 3.445 9 O -0.515 6.515 10 C -0.140 4.140 11 C -0.094 4.094 12 C 0.114 3.886 13 F -0.120 7.120 14 C -0.101 4.101 15 C -0.085 4.085 16 O -0.528 6.528 17 Si 0.949 3.051 18 H -0.246 1.246 19 H -0.244 1.244 20 H -0.243 1.243 21 C -0.145 4.145 22 C 0.160 3.840 23 F -0.105 7.105 24 H 0.068 0.932 25 H 0.070 0.930 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.069 0.931 33 H 0.085 0.915 34 H 0.085 0.915 35 H 0.073 0.927 36 H 0.074 0.926 37 H 0.400 0.600 38 H 0.152 0.848 39 H 0.127 0.873 40 H 0.379 0.621 41 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.371 2.565 1.091 3.107 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.562 4.562 2 Si 1.221 2.779 3 C -0.559 4.559 4 C -0.562 4.562 5 C -0.519 4.519 6 C 0.006 3.994 7 N -0.375 5.375 8 C 0.341 3.659 9 O -0.391 6.391 10 C -0.145 4.145 11 C -0.114 4.114 12 C 0.094 3.906 13 F -0.098 7.098 14 C -0.103 4.103 15 C -0.195 4.195 16 O -0.333 6.333 17 Si 0.770 3.230 18 H -0.170 1.170 19 H -0.167 1.167 20 H -0.166 1.166 21 C -0.163 4.163 22 C 0.139 3.861 23 F -0.083 7.083 24 H 0.088 0.912 25 H 0.089 0.911 26 H 0.089 0.911 27 H 0.088 0.912 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.088 0.912 33 H 0.103 0.897 34 H 0.104 0.896 35 H 0.092 0.908 36 H 0.092 0.908 37 H 0.236 0.764 38 H 0.170 0.830 39 H 0.145 0.855 40 H 0.226 0.774 41 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 0.443 1.758 1.158 2.152 hybrid contribution 0.526 0.462 -0.201 0.729 sum 0.970 2.220 0.957 2.605 Atomic orbital electron populations 1.26195 1.20789 1.04669 1.04561 0.78941 0.66922 0.66554 0.65469 1.26132 1.06285 1.18875 1.04603 1.26197 1.06289 1.08272 1.15457 1.26602 1.06732 1.01107 1.17441 1.21150 0.99659 0.91346 0.87294 1.46094 1.53763 1.11437 1.26178 1.17871 0.80832 0.82134 0.85073 1.90890 1.36693 1.65822 1.45739 1.19930 1.02970 0.93805 0.97763 1.21201 0.96818 1.00998 0.92351 1.17185 0.94358 0.90151 0.88930 1.91587 1.71803 1.80478 1.65909 1.20461 0.98147 0.93472 0.98200 1.25083 0.89041 1.08723 0.96683 1.86607 1.21380 1.72177 1.53161 0.85676 0.79428 0.75926 0.81995 1.17018 1.16746 1.16625 1.21039 0.99927 1.01766 0.93586 1.17483 0.91476 0.89136 0.88031 1.91653 1.70720 1.79703 1.66184 0.91233 0.91080 0.91073 0.91217 0.91040 0.91219 0.91070 0.91085 0.91229 0.89651 0.89650 0.90829 0.90824 0.76412 0.83043 0.85544 0.77396 0.82844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.93 8.65 101.05 0.87 1.80 16 2 Si 1.03 -3.88 12.19 -169.99 -2.07 -5.95 16 3 C -0.45 1.16 8.65 101.05 0.87 2.03 16 4 C -0.45 0.92 8.65 101.05 0.87 1.80 16 5 C -0.44 1.54 4.56 37.16 0.17 1.71 16 6 C 0.13 -0.14 5.05 -4.04 -0.02 -0.16 16 7 N -0.72 0.47 5.51 -61.30 -0.34 0.13 16 8 C 0.56 1.36 7.77 -12.40 -0.10 1.26 16 9 O -0.52 -3.31 15.34 5.30 0.08 -3.23 16 10 C -0.14 -0.13 5.88 -104.92 -0.62 -0.74 16 11 C -0.09 0.12 9.52 -39.11 -0.37 -0.25 16 12 C 0.11 -0.04 7.23 -39.49 -0.29 -0.33 16 13 F -0.12 -0.10 16.73 2.25 0.04 -0.06 16 14 C -0.10 0.08 5.27 -104.49 -0.55 -0.47 16 15 C -0.09 0.14 2.44 36.01 0.09 0.22 16 16 O -0.53 0.41 12.88 -35.23 -0.45 -0.04 16 17 Si 0.95 -1.89 25.48 -169.99 -4.33 -6.22 16 18 H -0.25 0.54 6.72 56.52 0.38 0.92 16 19 H -0.24 0.13 7.11 56.52 0.40 0.53 16 20 H -0.24 0.32 7.11 56.52 0.40 0.72 16 21 C -0.14 0.07 8.62 -39.58 -0.34 -0.27 16 22 C 0.16 0.26 7.28 -38.97 -0.28 -0.02 16 23 F -0.10 -0.43 15.55 2.25 0.04 -0.39 16 24 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 25 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 26 H 0.07 -0.11 7.79 -51.93 -0.40 -0.51 16 27 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 28 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 29 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 30 H 0.07 -0.11 7.79 -51.93 -0.40 -0.51 16 31 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 33 H 0.08 -0.35 7.96 -51.93 -0.41 -0.77 16 34 H 0.08 -0.35 7.96 -51.93 -0.41 -0.76 16 35 H 0.07 -0.04 7.79 -51.93 -0.40 -0.44 16 36 H 0.07 -0.04 7.79 -51.93 -0.40 -0.44 16 37 H 0.40 -1.38 6.51 -40.82 -0.27 -1.65 16 38 H 0.15 -0.63 6.40 -52.49 -0.34 -0.96 16 39 H 0.13 -0.27 7.89 -51.93 -0.41 -0.68 16 40 H 0.38 -1.63 8.70 45.56 0.40 -1.23 16 41 H 0.15 -0.31 4.86 -52.49 -0.25 -0.56 16 LS Contribution 351.38 15.07 5.30 5.30 Total: 0.00 -7.69 351.38 -6.46 -14.15 By element: Atomic # 1 Polarization: -5.26 SS G_CDS: -5.03 Total: -10.28 kcal Atomic # 6 Polarization: 6.29 SS G_CDS: 0.31 Total: 6.60 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.34 Total: 0.13 kcal Atomic # 8 Polarization: -2.90 SS G_CDS: -0.37 Total: -3.27 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.07 Total: -0.45 kcal Atomic # 14 Polarization: -5.76 SS G_CDS: -6.40 Total: -12.17 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -7.69 -6.46 -14.15 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9043546_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -163.668 kcal (2) G-P(sol) polarization free energy of solvation -7.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -171.357 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.149 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.816 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds