Wall clock time and date at job start Mon Mar 8 2021 00:50:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86296 * 109.47338 * 2 1 4 4 C 1.86303 * 109.47193 * 239.99804 * 2 1 3 5 5 C 1.86300 * 109.47008 * 120.00131 * 2 1 3 6 6 C 1.52998 * 109.47201 * 59.99729 * 5 2 1 7 7 N 1.46505 * 109.47219 * 180.02562 * 6 5 2 8 8 C 1.34769 * 120.00188 * 180.02562 * 7 6 5 9 9 O 1.21575 * 120.00156 * 359.97438 * 8 7 6 10 10 C 1.47716 * 120.00328 * 180.02562 * 8 7 6 11 11 C 1.39705 * 120.02683 * 179.97438 * 10 8 7 12 12 C 1.37673 * 119.97563 * 180.02562 * 11 10 8 13 13 C 1.39498 * 120.02186 * 0.02562 * 12 11 10 14 14 C 1.48286 * 119.97348 * 179.97438 * 13 12 11 15 15 C 1.39393 * 120.12559 * 359.72893 * 14 13 12 16 16 C 1.38006 * 119.87303 * 179.76321 * 15 14 13 17 17 C 1.38337 * 120.12047 * 0.48779 * 16 15 14 18 18 C 1.50706 * 119.87017 * 179.74528 * 17 16 15 19 19 O 1.42896 * 109.47049 * 245.02004 * 18 17 16 20 20 Si 1.86304 * 109.46712 * 5.01877 * 18 17 16 21 21 H 1.48500 * 109.47130 * 60.00390 * 20 18 17 22 22 H 1.48506 * 109.46696 * 180.02562 * 20 18 17 23 23 H 1.48501 * 109.47465 * 299.99790 * 20 18 17 24 24 C 1.38333 * 120.25812 * 359.76226 * 17 16 15 25 25 C 1.37995 * 120.12986 * 0.02562 * 24 17 16 26 26 C 1.39506 * 120.05182 * 0.27547 * 13 12 11 27 27 C 1.37661 * 120.02240 * 359.44166 * 26 13 12 28 28 H 1.09005 * 109.47293 * 300.00147 * 1 2 3 29 29 H 1.09001 * 109.47092 * 59.99835 * 1 2 3 30 30 H 1.08995 * 109.47209 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47279 * 179.97438 * 3 2 1 32 32 H 1.09001 * 109.47163 * 300.00121 * 3 2 1 33 33 H 1.09005 * 109.47048 * 59.99703 * 3 2 1 34 34 H 1.08996 * 109.46721 * 300.00462 * 4 2 1 35 35 H 1.09001 * 109.46807 * 60.00186 * 4 2 1 36 36 H 1.09001 * 109.46976 * 180.02562 * 4 2 1 37 37 H 1.09005 * 109.46866 * 299.99983 * 5 2 1 38 38 H 1.09001 * 109.47284 * 180.02562 * 5 2 1 39 39 H 1.08997 * 109.47161 * 60.00060 * 6 5 2 40 40 H 1.08993 * 109.47102 * 299.99743 * 6 5 2 41 41 H 0.97005 * 119.99813 * 0.02562 * 7 6 5 42 42 H 1.07995 * 120.01588 * 0.02562 * 11 10 8 43 43 H 1.07994 * 119.98900 * 179.97438 * 12 11 10 44 44 H 1.08005 * 120.06706 * 359.97226 * 15 14 13 45 45 H 1.07995 * 119.93767 * 180.23034 * 16 15 14 46 46 H 1.08991 * 109.46982 * 125.01820 * 18 17 16 47 47 H 0.96710 * 114.00103 * 59.99605 * 19 18 17 48 48 H 1.08001 * 119.93414 * 179.97438 * 24 17 16 49 49 H 1.07997 * 120.06890 * 179.97438 * 25 24 17 50 50 H 1.08000 * 119.98528 * 179.70733 * 26 13 12 51 51 H 1.07996 * 120.01318 * 180.28335 * 27 26 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4839 -0.8783 1.5211 6 6 1.9739 -2.3207 1.5211 7 7 2.4617 -3.0112 2.7176 8 6 2.1364 -4.3016 2.9307 9 8 1.4378 -4.8926 2.1303 10 6 2.6278 -4.9976 4.1374 11 6 2.2905 -6.3351 4.3591 12 6 2.7486 -6.9827 5.4843 13 6 3.5488 -6.3036 6.4032 14 6 4.0412 -7.0020 7.6152 15 6 3.7012 -8.3348 7.8413 16 6 4.1664 -8.9811 8.9684 17 6 4.9602 -8.3057 9.8780 18 6 5.4603 -9.0154 11.1099 19 8 4.8884 -8.4122 12.2723 20 14 4.9675 -10.8105 11.0355 21 1 5.5618 -11.4373 9.8276 22 1 5.4598 -11.5096 12.2497 23 1 3.4876 -10.9153 10.9704 24 6 5.2965 -6.9815 9.6615 25 6 4.8408 -6.3263 8.5357 26 6 3.8811 -4.9662 6.1861 27 6 3.4290 -4.3185 5.0587 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 3.5740 1.7564 0.0005 32 1 2.1207 2.2703 -0.8900 33 1 2.1207 2.2703 0.8900 34 1 2.1206 -1.9059 -1.5211 35 1 2.1207 -0.3644 -2.4111 36 1 3.5740 -0.8787 -1.5209 37 1 2.1206 -0.3644 2.4111 38 1 3.5740 -0.8779 1.5214 39 1 2.3372 -2.8346 0.6312 40 1 0.8840 -2.3207 1.5212 41 1 3.0189 -2.5396 3.3565 42 1 1.6706 -6.8609 3.6480 43 1 2.4876 -8.0164 5.6561 44 1 3.0778 -8.8617 7.1340 45 1 3.9067 -10.0148 9.1427 46 1 6.5465 -8.9385 11.1577 47 1 3.9222 -8.4441 12.2970 48 1 5.9162 -6.4592 10.3753 49 1 5.1036 -5.2923 8.3678 50 1 4.4969 -4.4402 6.9006 51 1 3.6901 -3.2845 4.8885 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9043546_13158362.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 00:50:15 Heat of formation + Delta-G solvation = -69.445758 kcal Electronic energy + Delta-G solvation = -27453.263903 eV Core-core repulsion = 23633.174935 eV Total energy + Delta-G solvation = -3820.088968 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 357.167 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.38784 -40.64005 -39.23155 -37.57012 -36.26867 -34.12566 -32.73956 -31.91650 -31.52783 -30.42901 -29.41494 -28.48740 -28.45785 -27.01326 -24.77392 -24.68800 -23.42992 -22.61961 -22.23584 -21.22622 -19.27568 -18.49888 -17.77816 -17.27531 -16.98479 -16.53724 -16.36937 -16.07434 -15.93490 -15.59863 -15.12025 -15.10485 -15.05463 -14.97113 -14.57039 -14.31276 -14.27543 -14.16211 -14.09268 -13.98948 -13.86108 -13.58591 -13.35122 -13.28865 -13.20599 -13.14013 -12.95911 -12.75603 -12.63448 -12.48176 -12.23497 -12.05259 -11.96080 -11.56305 -11.27641 -10.89789 -10.86265 -10.76916 -10.63491 -10.45043 -10.10366 -10.04414 -10.02993 -9.10582 -0.69648 0.29699 0.32751 0.49847 1.09559 1.37973 1.46818 1.55720 1.78514 1.80258 1.86657 1.89526 2.28849 2.60337 2.60511 2.98921 3.34415 3.44872 3.52226 3.64853 3.74084 3.82140 3.89423 3.93238 4.05523 4.12107 4.19265 4.21831 4.28219 4.48526 4.57470 4.59483 4.64526 4.65861 4.67172 4.70993 4.71670 4.73158 4.76150 4.80454 4.85866 4.90723 4.98339 5.06906 5.12212 5.14800 5.25215 5.36342 5.41132 5.42159 5.44066 5.51519 5.53191 5.59605 5.76172 5.85148 6.47906 6.51302 7.24586 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.454 4.454 2 Si 1.024 2.976 3 C -0.451 4.451 4 C -0.454 4.454 5 C -0.434 4.434 6 C 0.128 3.872 7 N -0.725 5.725 8 C 0.555 3.445 9 O -0.536 6.536 10 C -0.136 4.136 11 C -0.055 4.055 12 C -0.118 4.118 13 C -0.019 4.019 14 C -0.048 4.048 15 C -0.100 4.100 16 C -0.123 4.123 17 C -0.115 4.115 18 C -0.082 4.082 19 O -0.538 6.538 20 Si 0.948 3.052 21 H -0.250 1.250 22 H -0.253 1.253 23 H -0.251 1.251 24 C -0.088 4.088 25 C -0.105 4.105 26 C -0.118 4.118 27 C -0.083 4.083 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.068 0.932 34 H 0.070 0.930 35 H 0.070 0.930 36 H 0.068 0.932 37 H 0.084 0.916 38 H 0.084 0.916 39 H 0.071 0.929 40 H 0.071 0.929 41 H 0.400 0.600 42 H 0.140 0.860 43 H 0.134 0.866 44 H 0.131 0.869 45 H 0.124 0.876 46 H 0.119 0.881 47 H 0.377 0.623 48 H 0.131 0.869 49 H 0.130 0.870 50 H 0.133 0.867 51 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.713 2.644 1.300 3.408 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.562 4.562 2 Si 1.219 2.781 3 C -0.559 4.559 4 C -0.562 4.562 5 C -0.518 4.518 6 C 0.005 3.995 7 N -0.378 5.378 8 C 0.342 3.658 9 O -0.414 6.414 10 C -0.139 4.139 11 C -0.073 4.073 12 C -0.136 4.136 13 C -0.019 4.019 14 C -0.049 4.049 15 C -0.118 4.118 16 C -0.141 4.141 17 C -0.115 4.115 18 C -0.192 4.192 19 O -0.343 6.343 20 Si 0.771 3.229 21 H -0.173 1.173 22 H -0.177 1.177 23 H -0.175 1.175 24 C -0.106 4.106 25 C -0.123 4.123 26 C -0.136 4.136 27 C -0.101 4.101 28 H 0.088 0.912 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.090 0.910 33 H 0.088 0.912 34 H 0.089 0.911 35 H 0.089 0.911 36 H 0.088 0.912 37 H 0.102 0.898 38 H 0.102 0.898 39 H 0.089 0.911 40 H 0.089 0.911 41 H 0.235 0.765 42 H 0.158 0.842 43 H 0.152 0.848 44 H 0.149 0.851 45 H 0.141 0.859 46 H 0.137 0.863 47 H 0.224 0.776 48 H 0.149 0.851 49 H 0.148 0.852 50 H 0.151 0.849 51 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 1.602 1.461 0.823 2.319 hybrid contribution -0.097 0.673 0.172 0.702 sum 1.505 2.135 0.995 2.795 Atomic orbital electron populations 1.26190 1.20786 1.04662 1.04533 0.78971 0.66962 0.66568 0.65578 1.26129 1.06269 1.18869 1.04584 1.26189 1.06275 1.08274 1.15431 1.26587 1.06635 1.01282 1.17297 1.21097 0.99504 0.91290 0.87595 1.46126 1.53917 1.11842 1.25940 1.18313 0.80153 0.81724 0.85589 1.90797 1.37751 1.66173 1.46640 1.20015 1.02159 0.95541 0.96168 1.21232 0.96689 0.92939 0.96477 1.21245 0.97966 1.00496 0.93900 1.18988 0.96061 0.93457 0.93382 1.18822 0.98266 0.93757 0.94007 1.21205 0.99433 0.93801 0.97337 1.21011 0.98333 0.99770 0.94968 1.20424 0.98737 0.95472 0.96857 1.25001 1.02484 1.07593 0.84166 1.86527 1.25453 1.82112 1.40170 0.85694 0.80994 0.74899 0.81300 1.17324 1.17713 1.17525 1.20971 0.99010 0.93770 0.96801 1.21324 0.97074 1.00083 0.93795 1.21158 1.00716 0.93912 0.97789 1.21205 0.95904 0.99554 0.93470 0.91243 0.91100 0.91073 0.91228 0.91047 0.91230 0.91075 0.91101 0.91241 0.89761 0.89759 0.91059 0.91067 0.76474 0.84236 0.84816 0.85135 0.85871 0.86326 0.77601 0.85079 0.85243 0.84899 0.85407 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.77 8.65 101.05 0.87 1.65 16 2 Si 1.02 -3.47 12.19 -169.99 -2.07 -5.54 16 3 C -0.45 1.04 8.65 101.05 0.87 1.92 16 4 C -0.45 0.77 8.65 101.05 0.87 1.65 16 5 C -0.43 1.29 4.56 37.16 0.17 1.46 16 6 C 0.13 -0.04 5.05 -4.04 -0.02 -0.06 16 7 N -0.73 -0.13 5.51 -61.29 -0.34 -0.47 16 8 C 0.55 1.72 7.77 -12.39 -0.10 1.62 16 9 O -0.54 -3.63 16.33 5.30 0.09 -3.55 16 10 C -0.14 -0.22 5.88 -104.93 -0.62 -0.83 16 11 C -0.05 -0.09 9.58 -39.24 -0.38 -0.46 16 12 C -0.12 -0.05 9.41 -39.32 -0.37 -0.42 16 13 C -0.02 -0.01 5.88 -104.82 -0.62 -0.62 16 14 C -0.05 -0.02 5.88 -104.90 -0.62 -0.63 16 15 C -0.10 0.01 9.43 -39.24 -0.37 -0.36 16 16 C -0.12 0.02 8.65 -39.63 -0.34 -0.32 16 17 C -0.11 0.02 5.36 -104.55 -0.56 -0.54 16 18 C -0.08 0.08 2.80 36.01 0.10 0.18 16 19 O -0.54 0.08 12.83 -35.23 -0.45 -0.37 16 20 Si 0.95 -0.90 25.13 -169.99 -4.27 -5.17 16 21 H -0.25 0.07 7.11 56.52 0.40 0.47 16 22 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 23 H -0.25 0.21 7.04 56.52 0.40 0.60 16 24 C -0.09 0.02 9.67 -39.64 -0.38 -0.36 16 25 C -0.10 0.04 9.43 -39.24 -0.37 -0.33 16 26 C -0.12 0.07 9.41 -39.32 -0.37 -0.30 16 27 C -0.08 0.05 9.52 -39.24 -0.37 -0.32 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 30 H 0.07 -0.08 7.79 -51.93 -0.40 -0.48 16 31 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 32 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 33 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 34 H 0.07 -0.08 7.79 -51.93 -0.40 -0.48 16 35 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 36 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 37 H 0.08 -0.30 7.96 -51.93 -0.41 -0.71 16 38 H 0.08 -0.30 7.96 -51.93 -0.41 -0.71 16 39 H 0.07 0.02 7.79 -51.93 -0.40 -0.39 16 40 H 0.07 0.02 7.79 -51.93 -0.40 -0.39 16 41 H 0.40 -1.00 6.49 -40.82 -0.26 -1.26 16 42 H 0.14 0.24 7.64 -52.49 -0.40 -0.16 16 43 H 0.13 -0.20 6.19 -52.49 -0.32 -0.52 16 44 H 0.13 -0.23 6.19 -52.48 -0.33 -0.56 16 45 H 0.12 -0.17 4.84 -52.49 -0.25 -0.42 16 46 H 0.12 -0.20 7.96 -51.93 -0.41 -0.62 16 47 H 0.38 -1.22 8.70 45.56 0.40 -0.82 16 48 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 49 H 0.13 -0.29 6.19 -52.49 -0.33 -0.62 16 50 H 0.13 -0.36 6.19 -52.49 -0.32 -0.68 16 51 H 0.13 -0.44 6.39 -52.49 -0.34 -0.77 16 LS Contribution 415.13 15.07 6.26 6.26 Total: 0.00 -8.09 415.13 -10.51 -18.60 By element: Atomic # 1 Polarization: -5.52 SS G_CDS: -7.13 Total: -12.65 kcal Atomic # 6 Polarization: 5.48 SS G_CDS: -2.59 Total: 2.89 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.34 Total: -0.47 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -0.37 Total: -3.92 kcal Atomic # 14 Polarization: -4.37 SS G_CDS: -6.34 Total: -10.71 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -8.09 -10.51 -18.60 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9043546_13158362.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.842 kcal (2) G-P(sol) polarization free energy of solvation -8.091 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.933 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.604 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds