Wall clock time and date at job start Mon Mar 8 2021 00:51:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86302 * 1 3 3 C 1.86296 * 109.47094 * 2 1 4 4 C 1.86295 * 109.47575 * 240.00052 * 2 1 3 5 5 C 1.86298 * 109.47175 * 119.99844 * 2 1 3 6 6 C 1.52999 * 109.47275 * 59.99886 * 5 2 1 7 7 N 1.46501 * 109.47497 * 180.02562 * 6 5 2 8 8 C 1.34770 * 120.00108 * 180.02562 * 7 6 5 9 9 O 1.21285 * 119.99994 * 359.97438 * 8 7 6 10 10 C 1.50698 * 119.99981 * 180.02562 * 8 7 6 11 11 C 1.50706 * 109.47287 * 179.97438 * 10 8 7 12 12 C 1.38272 * 119.93336 * 89.99531 * 11 10 8 13 13 C 1.38123 * 120.06996 * 179.97438 * 12 11 10 14 14 C 1.38828 * 119.93049 * 0.02562 * 13 12 11 15 15 N 1.40193 * 120.06709 * 179.97438 * 14 13 12 16 16 C 1.36575 * 125.67166 * 310.15339 * 15 14 13 17 17 C 1.34851 * 108.20120 * 180.29586 * 16 15 14 18 18 C 1.40938 * 107.46556 * 359.74089 * 17 16 15 19 19 C 1.34852 * 107.47452 * 0.02562 * 18 17 16 20 20 C 1.50699 * 125.90323 * 180.02562 * 19 18 17 21 21 O 1.42895 * 109.47158 * 150.01978 * 20 19 18 22 22 Si 1.86300 * 109.46944 * 30.02499 * 20 19 18 23 23 H 1.48503 * 109.46942 * 180.02562 * 22 20 19 24 24 H 1.48503 * 109.47276 * 299.99703 * 22 20 19 25 25 H 1.48494 * 109.47372 * 59.99692 * 22 20 19 26 26 C 1.38830 * 119.86826 * 0.25407 * 14 13 12 27 27 C 1.38125 * 119.93262 * 359.49204 * 26 14 13 28 28 H 1.08997 * 109.46844 * 300.00176 * 1 2 3 29 29 H 1.08999 * 109.46539 * 60.00166 * 1 2 3 30 30 H 1.08998 * 109.46646 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47342 * 179.97438 * 3 2 1 32 32 H 1.08999 * 109.47366 * 300.00157 * 3 2 1 33 33 H 1.09009 * 109.47262 * 59.99816 * 3 2 1 34 34 H 1.09003 * 109.46795 * 300.00066 * 4 2 1 35 35 H 1.09002 * 109.47166 * 59.99792 * 4 2 1 36 36 H 1.08995 * 109.47755 * 180.02562 * 4 2 1 37 37 H 1.09009 * 109.47002 * 300.00075 * 5 2 1 38 38 H 1.08994 * 109.47334 * 180.02562 * 5 2 1 39 39 H 1.08999 * 109.46801 * 60.00224 * 6 5 2 40 40 H 1.09004 * 109.47361 * 300.00450 * 6 5 2 41 41 H 0.97003 * 119.99371 * 0.02562 * 7 6 5 42 42 H 1.08999 * 109.47296 * 59.99640 * 10 8 7 43 43 H 1.09005 * 109.46754 * 299.99304 * 10 8 7 44 44 H 1.08005 * 119.96931 * 359.96256 * 12 11 10 45 45 H 1.07991 * 120.03933 * 180.02562 * 13 12 11 46 46 H 1.08002 * 125.89554 * 0.04077 * 16 15 14 47 47 H 1.07991 * 126.26351 * 179.73728 * 17 16 15 48 48 H 1.08001 * 126.26434 * 180.02562 * 18 17 16 49 49 H 1.09000 * 109.47247 * 270.02431 * 20 19 18 50 50 H 0.96698 * 114.00355 * 300.00487 * 21 20 19 51 51 H 1.07995 * 120.03760 * 179.71871 * 26 14 13 52 52 H 1.08006 * 119.96975 * 180.25331 * 27 26 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4841 -0.8782 -1.5211 5 6 2.4840 -0.8782 1.5211 6 6 1.9740 -2.3207 1.5212 7 7 2.4619 -3.0111 2.7177 8 6 2.1366 -4.3015 2.9308 9 8 1.4396 -4.8910 2.1323 10 6 2.6379 -5.0115 4.1619 11 6 2.1357 -6.4324 4.1619 12 6 2.8846 -7.4290 3.5636 13 6 2.4272 -8.7323 3.5624 14 6 1.2139 -9.0411 4.1623 15 7 0.7467 -10.3629 4.1623 16 6 0.6665 -11.1793 3.0704 17 6 0.1641 -12.3660 3.4676 18 6 -0.0695 -12.2833 4.8551 19 6 0.2982 -11.0490 5.2548 20 6 0.2228 -10.5169 6.6627 21 8 1.2578 -9.5524 6.8635 22 14 0.4391 -11.9200 7.8691 23 1 0.3642 -11.3958 9.2565 24 1 -0.6365 -12.9225 7.6606 25 1 1.7613 -12.5602 7.6520 26 6 0.4614 -8.0375 4.7571 27 6 0.9266 -6.7369 4.7597 28 1 -0.3633 0.5139 0.8900 29 1 -0.3632 0.5138 -0.8900 30 1 -0.3632 -1.0277 0.0005 31 1 3.5740 1.7565 0.0005 32 1 2.1207 2.2703 -0.8899 33 1 2.1206 2.2703 0.8900 34 1 2.1208 -1.9059 -1.5210 35 1 2.1208 -0.3644 -2.4111 36 1 3.5741 -0.8786 -1.5209 37 1 2.1207 -0.3643 2.4112 38 1 3.5740 -0.8778 1.5214 39 1 2.3374 -2.8345 0.6313 40 1 0.8840 -2.3207 1.5212 41 1 3.0190 -2.5394 3.3565 42 1 2.2735 -4.4977 5.0514 43 1 3.7280 -5.0111 4.1629 44 1 3.8281 -7.1880 3.0965 45 1 3.0127 -9.5102 3.0954 46 1 0.9519 -10.9180 2.0621 47 1 -0.0248 -13.2227 2.8379 48 1 -0.4697 -13.0654 5.4833 49 1 -0.7477 -10.0470 6.8221 50 1 2.1507 -9.9016 6.7378 51 1 -0.4849 -8.2739 5.2206 52 1 0.3436 -5.9563 5.2259 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9043546_13287746.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 00:51:58 Heat of formation + Delta-G solvation = -39.758274 kcal Electronic energy + Delta-G solvation = -29180.695627 eV Core-core repulsion = 25269.156616 eV Total energy + Delta-G solvation = -3911.539012 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 360.178 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.59393 -40.90089 -39.53359 -37.66368 -36.22761 -34.75890 -32.29787 -32.03807 -31.04862 -30.88247 -29.46903 -28.49895 -28.47139 -27.63719 -25.97653 -23.94723 -23.87472 -22.89721 -21.42610 -21.27277 -20.53015 -19.19166 -17.98838 -17.57896 -17.22385 -16.99116 -16.48172 -16.19042 -16.00044 -15.74736 -15.52460 -15.18710 -14.83184 -14.58226 -14.51242 -14.36937 -14.33036 -14.24817 -14.13158 -14.02973 -13.94121 -13.85128 -13.36477 -13.30218 -13.23621 -13.15368 -13.11156 -13.06390 -12.92727 -12.56122 -12.43732 -12.29530 -12.06755 -11.91548 -11.80518 -11.24890 -10.90835 -10.87465 -10.71392 -10.60745 -10.17453 -10.02117 -9.84227 -9.02964 -8.91974 0.10794 0.48491 1.03488 1.42284 1.52812 1.56645 1.57221 1.71555 1.77718 1.79156 1.91518 2.07486 2.19572 2.30664 2.58408 2.87055 3.37207 3.62984 3.74777 3.81138 3.89260 3.99472 4.10421 4.12295 4.18039 4.23999 4.35821 4.46856 4.53667 4.56632 4.60024 4.64804 4.66002 4.66191 4.69807 4.70351 4.71758 4.72518 4.75095 4.90403 4.91296 5.05824 5.11585 5.29322 5.32339 5.34612 5.40454 5.45085 5.49455 5.50711 5.51808 5.60113 5.87755 6.03855 6.29582 6.51066 6.52810 6.62909 7.28882 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.455 4.455 2 Si 1.024 2.976 3 C -0.451 4.451 4 C -0.454 4.454 5 C -0.433 4.433 6 C 0.128 3.872 7 N -0.732 5.732 8 C 0.510 3.490 9 O -0.530 6.530 10 C -0.104 4.104 11 C -0.062 4.062 12 C -0.093 4.093 13 C -0.119 4.119 14 C 0.125 3.875 15 N -0.388 5.388 16 C -0.004 4.004 17 C -0.190 4.190 18 C -0.195 4.195 19 C -0.015 4.015 20 C -0.058 4.058 21 O -0.536 6.536 22 Si 0.974 3.026 23 H -0.253 1.253 24 H -0.249 1.249 25 H -0.252 1.252 26 C -0.081 4.081 27 C -0.089 4.089 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.070 0.930 33 H 0.068 0.932 34 H 0.070 0.930 35 H 0.070 0.930 36 H 0.068 0.932 37 H 0.083 0.917 38 H 0.083 0.917 39 H 0.069 0.931 40 H 0.069 0.931 41 H 0.401 0.599 42 H 0.105 0.895 43 H 0.105 0.895 44 H 0.127 0.873 45 H 0.127 0.873 46 H 0.164 0.836 47 H 0.142 0.858 48 H 0.142 0.858 49 H 0.117 0.883 50 H 0.374 0.626 51 H 0.125 0.875 52 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.213 4.052 1.597 5.412 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.562 4.562 2 Si 1.219 2.781 3 C -0.559 4.559 4 C -0.562 4.562 5 C -0.517 4.517 6 C 0.005 3.995 7 N -0.385 5.385 8 C 0.296 3.704 9 O -0.406 6.406 10 C -0.144 4.144 11 C -0.063 4.063 12 C -0.111 4.111 13 C -0.138 4.138 14 C 0.035 3.965 15 N -0.061 5.061 16 C -0.132 4.132 17 C -0.214 4.214 18 C -0.219 4.219 19 C -0.124 4.124 20 C -0.168 4.168 21 O -0.340 6.340 22 Si 0.795 3.205 23 H -0.177 1.177 24 H -0.172 1.172 25 H -0.175 1.175 26 C -0.100 4.100 27 C -0.108 4.108 28 H 0.087 0.913 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.088 0.912 34 H 0.089 0.911 35 H 0.089 0.911 36 H 0.087 0.913 37 H 0.102 0.898 38 H 0.102 0.898 39 H 0.087 0.913 40 H 0.087 0.913 41 H 0.235 0.765 42 H 0.123 0.877 43 H 0.123 0.877 44 H 0.145 0.855 45 H 0.145 0.855 46 H 0.182 0.818 47 H 0.159 0.841 48 H 0.160 0.840 49 H 0.135 0.865 50 H 0.221 0.779 51 H 0.143 0.857 52 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 2.404 3.632 1.725 4.685 hybrid contribution 0.613 0.230 -0.321 0.730 sum 3.018 3.862 1.404 5.098 Atomic orbital electron populations 1.26193 1.20848 1.04625 1.04519 0.78973 0.66925 0.66568 0.65640 1.26131 1.06261 1.18889 1.04577 1.26193 1.06255 1.08253 1.15474 1.26562 1.06573 1.01354 1.17165 1.21052 0.99361 0.91271 0.87797 1.46226 1.54301 1.12057 1.25960 1.20601 0.80500 0.81771 0.87546 1.90757 1.37127 1.65896 1.46783 1.20699 1.02929 0.93256 0.97514 1.19275 0.95120 0.93640 0.98259 1.20771 0.99984 0.91730 0.98639 1.20953 0.94330 0.97396 1.01139 1.17649 0.94255 0.82330 1.02290 1.41417 1.48739 1.08748 1.07212 1.22014 1.08065 0.91316 0.91817 1.20917 1.07194 0.97941 0.95321 1.20780 1.08644 0.96221 0.96304 1.20989 1.08406 0.93317 0.89723 1.24764 0.94886 1.01951 0.95179 1.86520 1.17148 1.37437 1.92889 0.85378 0.82008 0.75771 0.77392 1.17698 1.17235 1.17482 1.20838 0.99099 0.91590 0.98487 1.20797 0.95150 0.95883 0.98936 0.91254 0.91118 0.91117 0.91233 0.91066 0.91233 0.91122 0.91117 0.91256 0.89799 0.89803 0.91320 0.91321 0.76511 0.87663 0.87703 0.85538 0.85503 0.81834 0.84057 0.84035 0.86510 0.77858 0.85701 0.85582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.78 8.65 101.05 0.87 1.66 16 2 Si 1.02 -3.60 12.19 -169.99 -2.07 -5.67 16 3 C -0.45 1.09 8.65 101.05 0.87 1.96 16 4 C -0.45 0.80 8.65 101.05 0.87 1.68 16 5 C -0.43 1.43 4.56 37.16 0.17 1.60 16 6 C 0.13 -0.11 5.05 -4.04 -0.02 -0.13 16 7 N -0.73 0.82 5.56 -60.29 -0.33 0.48 16 8 C 0.51 0.65 7.82 -10.99 -0.09 0.56 16 9 O -0.53 -3.10 16.03 5.55 0.09 -3.01 16 10 C -0.10 0.15 5.83 -29.03 -0.17 -0.02 16 11 C -0.06 -0.06 4.38 -104.59 -0.46 -0.52 16 12 C -0.09 -0.10 9.69 -39.61 -0.38 -0.48 16 13 C -0.12 -0.20 9.66 -39.40 -0.38 -0.58 16 14 C 0.12 0.32 4.89 -83.59 -0.41 -0.08 16 15 N -0.39 -1.14 2.87 -56.73 -0.16 -1.30 16 16 C 0.00 -0.01 11.12 -16.64 -0.19 -0.20 16 17 C -0.19 -0.48 10.86 -39.76 -0.43 -0.92 16 18 C -0.19 -0.50 9.43 -39.76 -0.37 -0.87 16 19 C -0.01 -0.04 6.02 -81.68 -0.49 -0.53 16 20 C -0.06 -0.03 2.28 36.01 0.08 0.05 16 21 O -0.54 -0.39 9.89 -35.23 -0.35 -0.74 16 22 Si 0.97 -0.03 26.57 -169.99 -4.52 -4.54 16 23 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 24 H -0.25 -0.09 6.82 56.52 0.39 0.29 16 25 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 26 C -0.08 -0.20 7.68 -39.40 -0.30 -0.50 16 27 C -0.09 -0.14 9.69 -39.61 -0.38 -0.53 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 30 H 0.07 -0.08 7.79 -51.93 -0.40 -0.48 16 31 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 32 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 33 H 0.07 -0.17 7.96 -51.92 -0.41 -0.58 16 34 H 0.07 -0.08 7.79 -51.93 -0.40 -0.48 16 35 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 36 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 37 H 0.08 -0.32 7.96 -51.92 -0.41 -0.73 16 38 H 0.08 -0.32 7.96 -51.93 -0.41 -0.73 16 39 H 0.07 0.00 7.79 -51.93 -0.40 -0.41 16 40 H 0.07 0.00 7.79 -51.93 -0.40 -0.40 16 41 H 0.40 -1.58 8.47 -40.82 -0.35 -1.93 16 42 H 0.11 -0.36 8.08 -51.93 -0.42 -0.78 16 43 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 44 H 0.13 -0.08 8.06 -52.48 -0.42 -0.51 16 45 H 0.13 0.08 8.06 -52.49 -0.42 -0.35 16 46 H 0.16 0.14 8.06 -52.49 -0.42 -0.28 16 47 H 0.14 0.13 8.06 -52.49 -0.42 -0.30 16 48 H 0.14 0.16 6.70 -52.49 -0.35 -0.19 16 49 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 50 H 0.37 -0.45 8.70 45.56 0.40 -0.05 16 51 H 0.13 0.29 7.67 -52.49 -0.40 -0.11 16 52 H 0.13 0.02 8.06 -52.48 -0.42 -0.40 16 LS Contribution 427.85 15.07 6.45 6.45 Total: 0.00 -8.45 427.85 -10.32 -18.78 By element: Atomic # 1 Polarization: -4.37 SS G_CDS: -8.22 Total: -12.60 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: -1.20 Total: 2.16 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -0.50 Total: -0.82 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.26 Total: -3.75 kcal Atomic # 14 Polarization: -3.63 SS G_CDS: -6.59 Total: -10.22 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -8.45 -10.32 -18.78 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9043546_13287746.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.981 kcal (2) G-P(sol) polarization free energy of solvation -8.453 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.434 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.324 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.777 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds