Wall clock time and date at job start Mon Mar 8 2021 00:59:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86300 * 109.47474 * 2 1 4 4 C 1.86304 * 109.47165 * 239.99568 * 2 1 3 5 5 C 1.86301 * 109.46963 * 119.99794 * 2 1 3 6 6 C 1.53006 * 109.47122 * 60.00142 * 5 2 1 7 7 N 1.46504 * 109.46883 * 180.02562 * 6 5 2 8 8 C 1.34775 * 119.99531 * 179.97438 * 7 6 5 9 9 O 1.21612 * 120.00327 * 0.02562 * 8 7 6 10 10 C 1.47378 * 119.99868 * 179.97438 * 8 7 6 11 11 C 1.36418 * 127.19230 * 359.69099 * 10 8 7 12 12 O 1.33649 * 108.39371 * 179.88903 * 11 10 8 13 13 C 1.34215 * 110.91441 * 0.38695 * 12 11 10 14 14 C 1.50696 * 125.44088 * 179.75847 * 13 12 11 15 15 O 1.42897 * 109.47253 * 245.00163 * 14 13 12 16 16 Si 1.86311 * 109.47035 * 5.00303 * 14 13 12 17 17 H 1.48499 * 109.46928 * 59.99850 * 16 14 13 18 18 H 1.48496 * 109.46669 * 179.97438 * 16 14 13 19 19 H 1.48496 * 109.46722 * 299.99678 * 16 14 13 20 20 C 1.34174 * 109.12030 * 359.76270 * 13 12 11 21 21 H 1.09004 * 109.47066 * 300.00245 * 1 2 3 22 22 H 1.09004 * 109.46812 * 59.99778 * 1 2 3 23 23 H 1.08992 * 109.47172 * 180.02562 * 1 2 3 24 24 H 1.08992 * 109.47573 * 180.02562 * 3 2 1 25 25 H 1.09000 * 109.46785 * 299.99938 * 3 2 1 26 26 H 1.09004 * 109.47174 * 59.99821 * 3 2 1 27 27 H 1.09002 * 109.47281 * 300.00193 * 4 2 1 28 28 H 1.09004 * 109.46722 * 60.00599 * 4 2 1 29 29 H 1.09001 * 109.46859 * 180.02562 * 4 2 1 30 30 H 1.09001 * 109.47439 * 300.00340 * 5 2 1 31 31 H 1.09001 * 109.47357 * 180.02562 * 5 2 1 32 32 H 1.09001 * 109.47002 * 299.99654 * 6 5 2 33 33 H 1.08993 * 109.46955 * 60.00091 * 6 5 2 34 34 H 0.96992 * 119.99966 * 359.97438 * 7 6 5 35 35 H 1.07994 * 125.79858 * 0.02562 * 11 10 8 36 36 H 1.09003 * 109.47215 * 124.99735 * 14 13 12 37 37 H 0.96703 * 113.99943 * 60.00465 * 15 14 13 38 38 H 1.08006 * 127.02268 * 180.02562 * 20 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4841 -0.8784 -1.5211 5 6 2.4840 -0.8782 1.5212 6 6 1.9740 -2.3207 1.5212 7 7 2.4618 -3.0111 2.7178 8 6 2.1357 -4.3012 2.9313 9 8 1.4369 -4.8924 2.1306 10 6 2.6268 -4.9960 4.1347 11 6 3.4192 -4.4809 5.1186 12 8 3.6337 -5.4348 6.0298 13 6 3.0171 -6.5755 5.6837 14 6 3.0464 -7.8590 6.4729 15 8 3.7231 -8.8666 5.7187 16 14 3.9445 -7.5787 8.0810 17 1 3.2413 -6.5316 8.8647 18 1 3.9729 -8.8433 8.8589 19 1 5.3347 -7.1379 7.8012 20 6 2.3704 -6.3907 4.5227 21 1 -0.3633 0.5139 0.8900 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3633 -1.0276 0.0005 24 1 3.5741 1.7564 -0.0005 25 1 2.1208 2.2702 -0.8900 26 1 2.1208 2.2703 0.8900 27 1 2.1207 -1.9060 -1.5211 28 1 2.1208 -0.3645 -2.4111 29 1 3.5741 -0.8787 -1.5208 30 1 2.1206 -0.3644 2.4112 31 1 3.5740 -0.8778 1.5215 32 1 0.8840 -2.3207 1.5212 33 1 2.3373 -2.8345 0.6313 34 1 3.0194 -2.5397 3.3562 35 1 3.8054 -3.4731 5.1559 36 1 2.0260 -8.1826 6.6783 37 1 4.6386 -8.6455 5.4995 38 1 1.7814 -7.1179 3.9834 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9043546_13456056.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 00:59:43 Heat of formation + Delta-G solvation = -104.816054 kcal Electronic energy + Delta-G solvation = -18319.510064 eV Core-core repulsion = 15286.948692 eV Total energy + Delta-G solvation = -3032.561372 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 271.120 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -43.71744 -40.32965 -38.04698 -36.22360 -34.00422 -32.26472 -30.96610 -29.44722 -28.49519 -28.46218 -26.73020 -25.18313 -23.15915 -22.26046 -20.87057 -19.36201 -17.94582 -17.55443 -17.27298 -16.87430 -16.47776 -16.21743 -15.79385 -14.97128 -14.88859 -14.57410 -14.31986 -14.12655 -14.00148 -13.97836 -13.85726 -13.59041 -13.36010 -13.27368 -13.14772 -12.93534 -12.89707 -12.52048 -12.22554 -12.08511 -11.32403 -10.90739 -10.86982 -10.85877 -10.73364 -10.60950 -10.07514 -9.79706 0.24229 0.90086 0.99652 1.37555 1.42262 1.54480 1.73215 1.77709 1.79518 1.87066 2.26792 2.40299 2.59260 3.20310 3.41237 3.61160 3.89079 4.01778 4.10626 4.31971 4.42098 4.58253 4.61288 4.64998 4.66201 4.70421 4.71201 4.72665 4.75590 4.79971 4.89335 5.10301 5.23816 5.40098 5.42130 5.50947 5.52819 5.83211 6.34858 6.49739 7.25608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.455 4.455 2 Si 1.026 2.974 3 C -0.451 4.451 4 C -0.455 4.455 5 C -0.434 4.434 6 C 0.129 3.871 7 N -0.727 5.727 8 C 0.584 3.416 9 O -0.532 6.532 10 C -0.237 4.237 11 C 0.030 3.970 12 O -0.171 6.171 13 C -0.061 4.061 14 C -0.041 4.041 15 O -0.529 6.529 16 Si 0.961 3.039 17 H -0.248 1.248 18 H -0.245 1.245 19 H -0.249 1.249 20 C -0.120 4.120 21 H 0.068 0.932 22 H 0.070 0.930 23 H 0.070 0.930 24 H 0.068 0.932 25 H 0.070 0.930 26 H 0.068 0.932 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.068 0.932 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.397 0.603 35 H 0.213 0.787 36 H 0.137 0.863 37 H 0.381 0.619 38 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.722 3.972 2.109 5.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.562 4.562 2 Si 1.220 2.780 3 C -0.559 4.559 4 C -0.562 4.562 5 C -0.518 4.518 6 C 0.006 3.994 7 N -0.380 5.380 8 C 0.371 3.629 9 O -0.409 6.409 10 C -0.241 4.241 11 C -0.041 4.041 12 O -0.068 6.068 13 C -0.109 4.109 14 C -0.151 4.151 15 O -0.334 6.334 16 Si 0.780 3.220 17 H -0.171 1.171 18 H -0.168 1.168 19 H -0.172 1.172 20 C -0.140 4.140 21 H 0.087 0.913 22 H 0.089 0.911 23 H 0.089 0.911 24 H 0.088 0.912 25 H 0.089 0.911 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.087 0.913 30 H 0.102 0.898 31 H 0.102 0.898 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.232 0.768 35 H 0.230 0.770 36 H 0.155 0.845 37 H 0.229 0.771 38 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 2.240 3.381 2.627 4.833 hybrid contribution 0.450 0.668 -0.407 0.903 sum 2.690 4.049 2.221 5.345 Atomic orbital electron populations 1.26194 1.20806 1.04674 1.04529 0.78951 0.66936 0.66517 0.65551 1.26132 1.06259 1.18901 1.04581 1.26195 1.06266 1.08292 1.15450 1.26586 1.06620 1.01242 1.17313 1.21094 0.99533 0.91239 0.87487 1.46040 1.54176 1.11655 1.26093 1.17310 0.79882 0.81294 0.84423 1.90818 1.37645 1.66121 1.46359 1.21589 1.07247 0.96410 0.98876 1.24449 0.98275 0.93706 0.87659 1.83680 1.59460 1.19076 1.44543 1.22784 1.01122 0.88210 0.98831 1.24423 1.04869 0.82682 1.03150 1.86588 1.30060 1.40972 1.75773 0.85483 0.80169 0.81212 0.75092 1.17078 1.16850 1.17181 1.22552 1.01289 0.94618 0.95525 0.91252 0.91103 0.91062 0.91240 0.91053 0.91238 0.91062 0.91103 0.91252 0.89754 0.89755 0.91044 0.91040 0.76838 0.77037 0.84537 0.77105 0.81874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.83 8.65 101.05 0.87 1.70 16 2 Si 1.03 -3.68 12.19 -169.99 -2.07 -5.76 16 3 C -0.45 1.12 8.65 101.05 0.87 2.00 16 4 C -0.45 0.83 8.65 101.05 0.87 1.70 16 5 C -0.43 1.45 4.56 37.16 0.17 1.62 16 6 C 0.13 -0.08 5.05 -4.04 -0.02 -0.10 16 7 N -0.73 0.21 5.55 -61.39 -0.34 -0.14 16 8 C 0.58 1.86 7.81 -12.54 -0.10 1.77 16 9 O -0.53 -3.95 16.98 5.27 0.09 -3.86 16 10 C -0.24 -0.40 6.31 -103.27 -0.65 -1.05 16 11 C 0.03 -0.04 11.61 30.08 0.35 0.31 16 12 O -0.17 -0.04 8.90 7.66 0.07 0.03 16 13 C -0.06 -0.04 6.18 -35.74 -0.22 -0.26 16 14 C -0.04 0.04 2.97 36.00 0.11 0.15 16 15 O -0.53 0.16 12.88 -35.23 -0.45 -0.30 16 16 Si 0.96 -1.12 27.38 -169.99 -4.65 -5.78 16 17 H -0.25 0.03 7.11 56.52 0.40 0.43 16 18 H -0.25 0.05 7.11 56.52 0.40 0.46 16 19 H -0.25 0.12 7.11 56.52 0.40 0.52 16 20 C -0.12 -0.26 10.90 -37.45 -0.41 -0.67 16 21 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 22 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 23 H 0.07 -0.09 7.79 -51.93 -0.40 -0.49 16 24 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 25 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 26 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H 0.07 -0.09 7.79 -51.93 -0.40 -0.49 16 28 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 30 H 0.08 -0.33 7.96 -51.93 -0.41 -0.75 16 31 H 0.08 -0.33 7.96 -51.93 -0.41 -0.75 16 32 H 0.07 0.00 7.79 -51.93 -0.40 -0.40 16 33 H 0.07 0.00 7.79 -51.93 -0.40 -0.40 16 34 H 0.40 -1.39 7.44 -40.82 -0.30 -1.70 16 35 H 0.21 -1.23 7.47 -52.49 -0.39 -1.62 16 36 H 0.14 -0.31 7.96 -51.93 -0.41 -0.72 16 37 H 0.38 -1.34 8.70 45.56 0.40 -0.95 16 38 H 0.16 0.40 8.06 -52.48 -0.42 -0.02 16 LS Contribution 329.03 15.07 4.96 4.96 Total: 0.00 -8.59 329.03 -5.83 -14.41 By element: Atomic # 1 Polarization: -5.47 SS G_CDS: -5.27 Total: -10.75 kcal Atomic # 6 Polarization: 5.31 SS G_CDS: 1.85 Total: 7.16 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.34 Total: -0.14 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.30 Total: -4.12 kcal Atomic # 14 Polarization: -4.81 SS G_CDS: -6.73 Total: -11.53 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -8.59 -5.83 -14.41 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9043546_13456056.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.402 kcal (2) G-P(sol) polarization free energy of solvation -8.587 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.414 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.816 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds