Wall clock time and date at job start Mon Mar 8 2021 01:00:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86303 * 109.47186 * 2 1 4 4 C 1.86303 * 109.47263 * 239.99683 * 2 1 3 5 5 C 1.86303 * 109.46817 * 120.00033 * 2 1 3 6 6 C 1.52994 * 109.47189 * 59.99984 * 5 2 1 7 7 N 1.46500 * 109.47229 * 179.97438 * 6 5 2 8 8 C 1.34770 * 120.00669 * 180.02562 * 7 6 5 9 9 O 1.21278 * 119.99650 * 359.97438 * 8 7 6 10 10 C 1.50700 * 120.00465 * 180.02562 * 8 7 6 11 11 C 1.53542 * 109.82270 * 81.79309 * 10 8 7 12 12 C 1.53042 * 108.56200 * 180.48993 * 11 10 8 13 13 C 1.50202 * 110.24994 * 310.23459 * 12 11 10 14 14 C 1.50707 * 118.54967 * 200.27871 * 13 12 11 15 15 O 1.42897 * 109.46897 * 70.21223 * 14 13 12 16 16 Si 1.86300 * 109.47051 * 190.21493 * 14 13 12 17 17 H 1.48504 * 109.47106 * 60.00103 * 16 14 13 18 18 H 1.48504 * 109.46849 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.47349 * 299.99707 * 16 14 13 20 20 C 1.31115 * 122.90854 * 20.50484 * 13 12 11 21 21 N 1.38930 * 121.84506 * 359.08766 * 20 13 12 22 22 H 1.08996 * 109.47302 * 300.00313 * 1 2 3 23 23 H 1.09007 * 109.47115 * 60.00516 * 1 2 3 24 24 H 1.08999 * 109.47221 * 179.97438 * 1 2 3 25 25 H 1.08997 * 109.46708 * 179.97438 * 3 2 1 26 26 H 1.08998 * 109.46754 * 300.00027 * 3 2 1 27 27 H 1.09005 * 109.46732 * 59.99499 * 3 2 1 28 28 H 1.08999 * 109.47336 * 300.00339 * 4 2 1 29 29 H 1.09002 * 109.46532 * 60.00042 * 4 2 1 30 30 H 1.08996 * 109.46860 * 180.02562 * 4 2 1 31 31 H 1.08996 * 109.46902 * 299.99899 * 5 2 1 32 32 H 1.09006 * 109.46683 * 180.02562 * 5 2 1 33 33 H 1.08996 * 109.47268 * 60.00139 * 6 5 2 34 34 H 1.08996 * 109.47361 * 299.99668 * 6 5 2 35 35 H 0.97009 * 120.00073 * 359.97438 * 7 6 5 36 36 H 1.08993 * 109.86533 * 320.89477 * 10 8 7 37 37 H 1.08999 * 109.61814 * 300.21378 * 11 10 8 38 38 H 1.08995 * 109.62134 * 60.76333 * 11 10 8 39 39 H 1.08996 * 109.32573 * 70.68634 * 12 11 10 40 40 H 1.09003 * 109.32566 * 190.33796 * 12 11 10 41 41 H 1.09001 * 109.46980 * 310.21434 * 14 13 12 42 42 H 0.96698 * 113.99426 * 180.02562 * 15 14 13 43 43 H 1.08002 * 119.08189 * 179.37269 * 20 13 12 44 44 H 0.96997 * 120.55929 * 193.55616 * 21 20 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4839 -0.8783 1.5212 6 6 1.9739 -2.3207 1.5212 7 7 2.4627 -3.0115 2.7170 8 6 2.1376 -4.3020 2.9301 9 8 1.4401 -4.8913 2.1320 10 6 2.6399 -5.0124 4.1606 11 6 1.7429 -4.6739 5.3599 12 6 2.2851 -5.3990 6.5937 13 6 2.5168 -6.8503 6.2838 14 6 2.5973 -7.8273 7.4285 15 8 1.3037 -7.9802 8.0161 16 14 3.1915 -9.4762 6.7969 17 1 4.5358 -9.3172 6.1863 18 1 3.2714 -10.4387 7.9250 19 1 2.2414 -9.9869 5.7762 20 6 2.6564 -7.3043 5.0617 21 7 2.5803 -6.4671 3.9556 22 1 -0.3634 0.5139 0.8899 23 1 -0.3634 0.5138 -0.8901 24 1 -0.3633 -1.0276 -0.0005 25 1 3.5740 1.7564 0.0005 26 1 2.1207 2.2702 -0.8900 27 1 2.1206 2.2703 0.8900 28 1 2.1207 -1.9060 -1.5211 29 1 2.1207 -0.3645 -2.4111 30 1 3.5740 -0.8787 -1.5208 31 1 2.1206 -0.3644 2.4111 32 1 3.5740 -0.8779 1.5214 33 1 2.3372 -2.8345 0.6313 34 1 0.8839 -2.3207 1.5212 35 1 3.0209 -2.5403 3.3553 36 1 3.6661 -4.7103 4.3696 37 1 1.7543 -3.5978 5.5332 38 1 0.7238 -5.0042 5.1595 39 1 3.2239 -4.9375 6.8998 40 1 1.5623 -5.3192 7.4057 41 1 3.2947 -7.4525 8.1777 42 1 1.2806 -8.5960 8.7613 43 1 2.8309 -8.3593 4.9104 44 1 2.4897 -6.8361 3.0632 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9043546_15413834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 01:00:09 Heat of formation + Delta-G solvation = -102.176748 kcal Electronic energy + Delta-G solvation = -20799.438206 eV Core-core repulsion = 17681.860848 eV Total energy + Delta-G solvation = -3117.577358 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 286.163 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.25831 -39.40127 -37.36384 -36.28184 -33.29830 -33.19343 -31.34486 -29.48577 -28.50495 -28.47792 -27.39992 -25.33313 -23.96842 -23.16604 -21.65006 -19.14536 -19.05818 -18.23635 -17.43901 -17.19462 -16.53159 -16.25369 -15.42816 -15.22097 -15.13800 -14.83963 -14.43475 -14.30839 -14.17720 -14.14588 -14.08606 -13.89439 -13.86425 -13.37074 -13.29053 -13.24247 -13.15955 -13.04206 -12.95514 -12.52829 -12.41389 -12.05136 -11.66176 -11.56795 -11.25039 -11.16703 -10.91479 -10.88256 -10.54786 -10.11074 -10.08678 -8.38179 1.26608 1.38878 1.47083 1.51156 1.54164 1.58983 1.76399 1.78340 1.96850 2.10749 2.52595 2.72253 3.58173 3.67158 3.77643 3.97187 4.02265 4.03905 4.09921 4.26376 4.43165 4.54717 4.57852 4.64416 4.65346 4.68481 4.69155 4.69622 4.71185 4.73820 4.80112 4.87335 5.06615 5.09749 5.24119 5.33183 5.38738 5.40384 5.49381 5.51221 5.63698 6.29120 6.46629 6.76871 6.88855 7.14951 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.455 4.455 2 Si 1.025 2.975 3 C -0.451 4.451 4 C -0.455 4.455 5 C -0.433 4.433 6 C 0.128 3.872 7 N -0.724 5.724 8 C 0.509 3.491 9 O -0.532 6.532 10 C 0.135 3.865 11 C -0.126 4.126 12 C -0.053 4.053 13 C -0.237 4.237 14 C -0.055 4.055 15 O -0.548 6.548 16 Si 0.934 3.066 17 H -0.252 1.252 18 H -0.259 1.259 19 H -0.251 1.251 20 C 0.134 3.866 21 N -0.732 5.732 22 H 0.069 0.931 23 H 0.070 0.930 24 H 0.070 0.930 25 H 0.069 0.931 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.069 0.931 29 H 0.070 0.930 30 H 0.068 0.932 31 H 0.084 0.916 32 H 0.084 0.916 33 H 0.070 0.930 34 H 0.071 0.929 35 H 0.403 0.597 36 H 0.090 0.910 37 H 0.078 0.922 38 H 0.077 0.923 39 H 0.066 0.934 40 H 0.080 0.920 41 H 0.065 0.935 42 H 0.374 0.626 43 H 0.127 0.873 44 H 0.409 0.591 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.269 3.454 1.566 5.007 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.562 4.562 2 Si 1.220 2.780 3 C -0.559 4.559 4 C -0.562 4.562 5 C -0.517 4.517 6 C 0.005 3.995 7 N -0.378 5.378 8 C 0.294 3.706 9 O -0.408 6.408 10 C 0.026 3.974 11 C -0.165 4.165 12 C -0.090 4.090 13 C -0.247 4.247 14 C -0.167 4.167 15 O -0.353 6.353 16 Si 0.759 3.241 17 H -0.176 1.176 18 H -0.184 1.184 19 H -0.175 1.175 20 C 0.014 3.986 21 N -0.365 5.365 22 H 0.088 0.912 23 H 0.089 0.911 24 H 0.089 0.911 25 H 0.088 0.912 26 H 0.089 0.911 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.103 0.897 32 H 0.103 0.897 33 H 0.088 0.912 34 H 0.089 0.911 35 H 0.237 0.763 36 H 0.108 0.892 37 H 0.097 0.903 38 H 0.096 0.904 39 H 0.084 0.916 40 H 0.098 0.902 41 H 0.083 0.917 42 H 0.220 0.780 43 H 0.144 0.856 44 H 0.246 0.754 Dipole moment (debyes) X Y Z Total from point charges 2.921 2.779 0.236 4.039 hybrid contribution 0.291 0.060 0.590 0.660 sum 3.212 2.839 0.825 4.366 Atomic orbital electron populations 1.26196 1.20825 1.04633 1.04551 0.78956 0.66910 0.66568 0.65544 1.26131 1.06270 1.18887 1.04596 1.26195 1.06266 1.08238 1.15494 1.26574 1.06649 1.01196 1.17306 1.21096 0.99490 0.91359 0.87549 1.46157 1.53791 1.11816 1.25990 1.20641 0.80510 0.82324 0.87164 1.90734 1.37181 1.66079 1.46792 1.21022 1.00270 0.82782 0.93357 1.21854 0.99791 1.00817 0.94003 1.19964 1.00879 0.91163 0.97001 1.19889 1.16456 0.96171 0.92161 1.24410 0.88762 1.06169 0.97385 1.86533 1.29049 1.68259 1.51484 0.85964 0.80207 0.77075 0.80868 1.17595 1.18394 1.17542 1.20333 0.97006 0.94182 0.87127 1.44205 1.81864 1.02709 1.07764 0.91221 0.91110 0.91121 0.91228 0.91057 0.91212 0.91134 0.91101 0.91249 0.89687 0.89724 0.91162 0.91120 0.76296 0.89233 0.90326 0.90413 0.91587 0.90171 0.91715 0.77972 0.85626 0.75412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.86 8.65 101.05 0.87 1.73 16 2 Si 1.03 -3.78 12.19 -169.99 -2.07 -5.85 16 3 C -0.45 1.13 8.65 101.05 0.87 2.00 16 4 C -0.45 0.88 8.65 101.05 0.87 1.76 16 5 C -0.43 1.51 4.56 37.15 0.17 1.68 16 6 C 0.13 -0.13 5.05 -4.04 -0.02 -0.15 16 7 N -0.72 0.74 5.56 -60.30 -0.33 0.41 16 8 C 0.51 0.85 7.08 -10.99 -0.08 0.77 16 9 O -0.53 -3.00 16.10 5.56 0.09 -2.91 16 10 C 0.14 0.04 3.36 -68.51 -0.23 -0.19 16 11 C -0.13 -0.02 5.47 -26.43 -0.14 -0.16 16 12 C -0.05 -0.03 5.85 -28.10 -0.16 -0.19 16 13 C -0.24 -0.40 5.40 -101.33 -0.55 -0.94 16 14 C -0.06 -0.02 2.80 36.01 0.10 0.08 16 15 O -0.55 -0.67 12.86 -35.23 -0.45 -1.13 16 16 Si 0.93 0.14 25.20 -169.99 -4.28 -4.15 16 17 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 18 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 19 H -0.25 -0.40 6.88 56.52 0.39 -0.01 16 20 C 0.13 0.24 9.62 -16.08 -0.15 0.09 16 21 N -0.73 -1.26 5.46 -55.34 -0.30 -1.56 16 22 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 23 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 24 H 0.07 -0.09 7.79 -51.93 -0.40 -0.49 16 25 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 26 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 27 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 28 H 0.07 -0.10 7.79 -51.93 -0.40 -0.50 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H 0.08 -0.34 7.96 -51.93 -0.41 -0.75 16 32 H 0.08 -0.34 7.96 -51.93 -0.41 -0.75 16 33 H 0.07 -0.03 7.79 -51.93 -0.40 -0.43 16 34 H 0.07 -0.02 7.79 -51.93 -0.40 -0.42 16 35 H 0.40 -1.50 8.47 -40.82 -0.35 -1.84 16 36 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.08 0.19 8.14 -51.93 -0.42 -0.24 16 39 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 41 H 0.06 -0.07 7.96 -51.93 -0.41 -0.48 16 42 H 0.37 -1.13 8.74 45.56 0.40 -0.73 16 43 H 0.13 0.11 4.33 -52.49 -0.23 -0.12 16 44 H 0.41 0.75 8.12 -40.82 -0.33 0.41 16 LS Contribution 354.79 15.07 5.35 5.35 Total: 0.00 -7.41 354.79 -7.64 -15.05 By element: Atomic # 1 Polarization: -4.50 SS G_CDS: -7.18 Total: -11.68 kcal Atomic # 6 Polarization: 4.91 SS G_CDS: 1.55 Total: 6.47 kcal Atomic # 7 Polarization: -0.52 SS G_CDS: -0.64 Total: -1.15 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.36 Total: -4.04 kcal Atomic # 14 Polarization: -3.64 SS G_CDS: -6.36 Total: -9.99 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -7.41 -7.64 -15.05 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9043546_15413834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.125 kcal (2) G-P(sol) polarization free energy of solvation -7.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.052 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.177 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds