Wall clock time and date at job start Mon Mar 8 2021 01:06:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86304 * 1 3 3 C 1.86300 * 109.47433 * 2 1 4 4 C 1.86303 * 109.47165 * 239.99729 * 2 1 3 5 5 C 1.86301 * 109.46996 * 119.99974 * 2 1 3 6 6 C 1.53006 * 109.47122 * 59.99736 * 5 2 1 7 7 N 1.46496 * 109.46995 * 180.02562 * 6 5 2 8 8 C 1.34775 * 119.99642 * 180.02562 * 7 6 5 9 9 O 1.21279 * 120.00300 * 359.97438 * 8 7 6 10 10 C 1.50703 * 119.99773 * 180.02562 * 8 7 6 11 11 F 1.39900 * 109.47515 * 59.99807 * 10 8 7 12 12 F 1.39897 * 109.47274 * 299.99712 * 10 8 7 13 13 O 1.42905 * 109.47264 * 179.97438 * 10 8 7 14 14 C 1.35897 * 117.00093 * 179.97438 * 13 10 8 15 15 C 1.38737 * 120.05547 * 359.72645 * 14 13 10 16 16 C 1.38149 * 119.94020 * 179.74326 * 15 14 13 17 17 C 1.38269 * 120.05599 * 0.51033 * 16 15 14 18 18 C 1.50701 * 119.94263 * 179.74419 * 17 16 15 19 19 O 1.42895 * 109.47045 * 245.01911 * 18 17 16 20 20 Si 1.86303 * 109.46953 * 5.02003 * 18 17 16 21 21 H 1.48498 * 109.47146 * 60.00114 * 20 18 17 22 22 H 1.48501 * 109.46717 * 179.97438 * 20 18 17 23 23 H 1.48500 * 109.47229 * 299.99757 * 20 18 17 24 24 C 1.38265 * 120.10911 * 359.76477 * 17 16 15 25 25 C 1.38141 * 120.06229 * 359.97438 * 24 17 16 26 26 H 1.08992 * 109.47216 * 300.00424 * 1 2 3 27 27 H 1.09004 * 109.46722 * 59.99672 * 1 2 3 28 28 H 1.08992 * 109.47015 * 179.97438 * 1 2 3 29 29 H 1.08992 * 109.47566 * 179.97438 * 3 2 1 30 30 H 1.09000 * 109.46936 * 299.99887 * 3 2 1 31 31 H 1.09001 * 109.47083 * 59.99601 * 3 2 1 32 32 H 1.08992 * 109.47172 * 300.00252 * 4 2 1 33 33 H 1.09004 * 109.46812 * 60.00653 * 4 2 1 34 34 H 1.08996 * 109.47221 * 179.97438 * 4 2 1 35 35 H 1.09001 * 109.46900 * 300.00019 * 5 2 1 36 36 H 1.08996 * 109.46889 * 179.97438 * 5 2 1 37 37 H 1.08998 * 109.46509 * 60.00349 * 6 5 2 38 38 H 1.08996 * 109.46884 * 300.00672 * 6 5 2 39 39 H 0.96998 * 120.00192 * 359.97438 * 7 6 5 40 40 H 1.08000 * 120.02659 * 359.97438 * 15 14 13 41 41 H 1.07999 * 119.97009 * 180.23164 * 16 15 14 42 42 H 1.08999 * 109.46655 * 125.01749 * 18 17 16 43 43 H 0.96706 * 113.99797 * 60.00411 * 19 18 17 44 44 H 1.08004 * 119.96780 * 179.97438 * 24 17 16 45 45 H 1.07997 * 120.03246 * 179.97438 * 25 24 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4841 -0.8783 -1.5211 5 6 2.4840 -0.8782 1.5212 6 6 1.9739 -2.3208 1.5212 7 7 2.4617 -3.0111 2.7177 8 6 2.1364 -4.3016 2.9307 9 8 1.4394 -4.8911 2.1322 10 6 2.6377 -5.0116 4.1618 11 9 2.1700 -4.3522 5.3036 12 9 4.0367 -5.0112 4.1633 13 8 2.1614 -6.3590 4.1618 14 6 2.5261 -7.1423 5.2107 15 6 3.3307 -6.6265 6.2164 16 6 3.6956 -7.4234 7.2842 17 6 3.2685 -8.7370 7.3459 18 6 3.6729 -9.6056 8.5091 19 8 4.5071 -10.6680 8.0428 20 14 4.6083 -8.5817 9.7530 21 1 3.7414 -7.4777 10.2376 22 1 5.0063 -9.4376 10.8995 23 1 5.8224 -8.0137 9.1139 24 6 2.4713 -9.2550 6.3420 25 6 2.0991 -8.4608 5.2747 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 3.5740 1.7564 0.0005 30 1 2.1208 2.2702 -0.8900 31 1 2.1208 2.2703 0.8900 32 1 2.1207 -1.9059 -1.5211 33 1 2.1208 -0.3644 -2.4111 34 1 3.5740 -0.8779 -1.5213 35 1 2.1206 -0.3644 2.4111 36 1 3.5740 -0.8786 1.5209 37 1 2.3373 -2.8345 0.6312 38 1 0.8839 -2.3207 1.5211 39 1 3.0194 -2.5398 3.3561 40 1 3.6683 -5.6019 6.1663 41 1 4.3189 -7.0213 8.0693 42 1 2.7817 -10.0225 8.9782 43 1 5.3205 -10.3697 7.6131 44 1 2.1392 -10.2815 6.3923 45 1 1.4767 -8.8660 4.4906 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9043546_4549640.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 01:06:43 Heat of formation + Delta-G solvation = -221.135627 kcal Electronic energy + Delta-G solvation = -28294.082620 eV Core-core repulsion = 23878.267923 eV Total energy + Delta-G solvation = -4415.814697 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 347.132 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -50.78607 -48.76338 -41.33325 -40.92293 -39.22222 -37.27450 -36.66749 -32.45804 -32.19197 -31.83449 -29.61751 -28.64432 -28.53972 -28.52837 -26.27847 -24.65817 -23.72390 -22.68058 -22.24335 -20.52008 -19.79992 -19.58287 -18.57144 -17.63764 -17.35004 -16.98722 -16.77734 -16.47024 -16.27462 -15.89178 -15.80513 -15.43690 -15.27428 -15.22266 -15.06871 -15.00339 -14.62954 -14.41056 -14.33012 -14.22523 -14.14093 -14.07928 -13.95471 -13.62119 -13.42377 -13.34061 -13.20720 -13.13500 -12.96146 -12.71597 -12.38643 -12.25646 -12.12827 -11.73942 -11.58971 -10.97949 -10.94067 -10.93173 -10.51317 -10.46291 -10.13501 -9.51036 0.09171 0.20115 0.55060 0.78782 1.11259 1.39186 1.47868 1.51167 1.70033 1.72379 1.83927 1.87983 2.13906 2.45678 2.51394 2.88796 3.33995 3.42669 3.54158 3.68406 3.75966 3.76407 3.93555 4.11157 4.23239 4.39489 4.43201 4.56765 4.60256 4.60747 4.63704 4.64854 4.65907 4.67781 4.71502 4.79679 4.83635 4.95873 5.02288 5.09602 5.36224 5.38544 5.43536 5.44816 5.46662 5.84819 5.91738 6.47523 6.51255 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.456 4.456 2 Si 1.030 2.970 3 C -0.452 4.452 4 C -0.456 4.456 5 C -0.438 4.438 6 C 0.126 3.874 7 N -0.701 5.701 8 C 0.512 3.488 9 O -0.470 6.470 10 C 0.430 3.570 11 F -0.175 7.175 12 F -0.176 7.176 13 O -0.286 6.286 14 C 0.107 3.893 15 C -0.186 4.186 16 C -0.086 4.086 17 C -0.143 4.143 18 C -0.077 4.077 19 O -0.538 6.538 20 Si 0.946 3.054 21 H -0.250 1.250 22 H -0.252 1.252 23 H -0.251 1.251 24 C -0.053 4.053 25 C -0.126 4.126 26 H 0.069 0.931 27 H 0.071 0.929 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.069 0.931 35 H 0.088 0.912 36 H 0.088 0.912 37 H 0.080 0.920 38 H 0.080 0.920 39 H 0.410 0.590 40 H 0.135 0.865 41 H 0.128 0.872 42 H 0.120 0.880 43 H 0.377 0.623 44 H 0.142 0.858 45 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.535 4.406 -0.049 4.666 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.563 4.563 2 Si 1.225 2.775 3 C -0.559 4.559 4 C -0.563 4.563 5 C -0.521 4.521 6 C 0.005 3.995 7 N -0.356 5.356 8 C 0.289 3.711 9 O -0.341 6.341 10 C 0.353 3.647 11 F -0.157 7.157 12 F -0.157 7.157 13 O -0.202 6.202 14 C 0.064 3.936 15 C -0.205 4.205 16 C -0.104 4.104 17 C -0.144 4.144 18 C -0.188 4.188 19 O -0.343 6.343 20 Si 0.769 3.231 21 H -0.173 1.173 22 H -0.176 1.176 23 H -0.175 1.175 24 C -0.071 4.071 25 C -0.145 4.145 26 H 0.088 0.912 27 H 0.090 0.910 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.090 0.910 34 H 0.088 0.912 35 H 0.107 0.893 36 H 0.107 0.893 37 H 0.099 0.901 38 H 0.099 0.901 39 H 0.245 0.755 40 H 0.153 0.847 41 H 0.145 0.855 42 H 0.138 0.862 43 H 0.224 0.776 44 H 0.160 0.840 45 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 0.900 4.067 0.091 4.166 hybrid contribution 0.726 0.591 0.119 0.944 sum 1.626 4.658 0.211 4.938 Atomic orbital electron populations 1.26203 1.20733 1.04695 1.04685 0.78898 0.66885 0.66615 0.65148 1.26130 1.06330 1.18795 1.04678 1.26204 1.06365 1.08252 1.15494 1.26657 1.07049 1.00492 1.17874 1.21357 1.00083 0.91651 0.86410 1.46086 1.52805 1.10035 1.26672 1.19362 0.82810 0.83404 0.85501 1.90872 1.34662 1.65015 1.43527 1.21912 0.75656 0.82445 0.84732 1.93190 1.88139 1.81084 1.53274 1.93186 1.29822 1.96148 1.96540 1.86677 1.70113 1.19584 1.43838 1.18996 0.96489 0.91273 0.86833 1.21452 1.01815 1.01557 0.95669 1.20849 0.98770 0.93332 0.97423 1.20339 1.00904 0.94604 0.98518 1.24930 0.99822 0.94568 0.99444 1.86525 1.35802 1.32093 1.79856 0.85733 0.80066 0.78629 0.78675 1.17317 1.17591 1.17527 1.20898 0.94826 0.99762 0.91594 1.20556 1.02974 0.90355 1.00585 0.91159 0.90986 0.91074 0.91175 0.90963 0.91177 0.91072 0.90986 0.91160 0.89330 0.89333 0.90131 0.90135 0.75470 0.84724 0.85453 0.86233 0.77592 0.84050 0.84063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.46 1.25 8.65 101.05 0.87 2.13 16 2 Si 1.03 -4.64 12.19 -169.99 -2.07 -6.71 16 3 C -0.45 1.40 8.65 101.05 0.87 2.28 16 4 C -0.46 1.26 8.65 101.05 0.87 2.13 16 5 C -0.44 1.88 4.56 37.16 0.17 2.05 16 6 C 0.13 -0.26 5.05 -4.04 -0.02 -0.28 16 7 N -0.70 0.72 5.56 -60.30 -0.33 0.38 16 8 C 0.51 1.15 7.34 -10.98 -0.08 1.07 16 9 O -0.47 -2.57 16.50 -14.35 -0.24 -2.80 16 10 C 0.43 0.96 2.05 36.01 0.07 1.03 16 11 F -0.18 -0.28 15.31 2.25 0.03 -0.24 16 12 F -0.18 -0.27 15.27 2.25 0.03 -0.23 16 13 O -0.29 -1.15 9.60 -39.32 -0.38 -1.53 16 14 C 0.11 0.33 6.48 -39.21 -0.25 0.07 16 15 C -0.19 -0.39 8.26 -39.43 -0.33 -0.72 16 16 C -0.09 -0.09 8.66 -39.60 -0.34 -0.43 16 17 C -0.14 -0.08 5.35 -104.60 -0.56 -0.64 16 18 C -0.08 0.05 2.80 36.01 0.10 0.15 16 19 O -0.54 -0.05 12.83 -35.23 -0.45 -0.50 16 20 Si 0.95 -0.64 25.13 -169.99 -4.27 -4.91 16 21 H -0.25 0.00 7.11 56.52 0.40 0.40 16 22 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 23 H -0.25 0.14 7.04 56.52 0.40 0.54 16 24 C -0.05 -0.04 9.68 -39.61 -0.38 -0.42 16 25 C -0.13 -0.22 9.99 -39.43 -0.39 -0.61 16 26 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 27 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 28 H 0.07 -0.17 7.79 -51.93 -0.40 -0.57 16 29 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 30 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 31 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 32 H 0.07 -0.17 7.79 -51.93 -0.40 -0.57 16 33 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 34 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 35 H 0.09 -0.43 7.96 -51.93 -0.41 -0.84 16 36 H 0.09 -0.43 7.96 -51.93 -0.41 -0.84 16 37 H 0.08 -0.15 7.79 -51.93 -0.40 -0.56 16 38 H 0.08 -0.15 7.79 -51.93 -0.40 -0.56 16 39 H 0.41 -1.38 8.47 -40.82 -0.35 -1.73 16 40 H 0.14 0.18 5.10 -52.49 -0.27 -0.09 16 41 H 0.13 -0.07 4.86 -52.49 -0.25 -0.32 16 42 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 43 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 44 H 0.14 -0.12 8.06 -52.48 -0.42 -0.54 16 45 H 0.14 0.08 8.06 -52.49 -0.42 -0.35 16 LS Contribution 383.87 15.07 5.78 5.78 Total: 0.00 -7.17 383.87 -7.16 -14.33 By element: Atomic # 1 Polarization: -5.50 SS G_CDS: -5.87 Total: -11.37 kcal Atomic # 6 Polarization: 7.20 SS G_CDS: 0.61 Total: 7.80 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -0.33 Total: 0.38 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -1.07 Total: -4.83 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.07 Total: -0.48 kcal Atomic # 14 Polarization: -5.28 SS G_CDS: -6.35 Total: -11.62 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -7.17 -7.16 -14.33 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9043546_4549640.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -206.808 kcal (2) G-P(sol) polarization free energy of solvation -7.171 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -213.978 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.157 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.328 kcal (6) G-S(sol) free energy of system = (1) + (5) -221.136 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds