Wall clock time and date at job start Mon Mar 8 2021 06:49:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35712 * 116.99843 * 2 1 4 4 C 1.38682 * 119.86789 * 359.97438 * 3 2 1 5 5 C 1.38440 * 120.03696 * 180.02562 * 4 3 2 6 6 O 1.35653 * 120.12372 * 180.02562 * 5 4 3 7 7 C 1.42901 * 117.00038 * 359.97438 * 6 5 4 8 8 C 1.40301 * 119.75656 * 0.02562 * 5 4 3 9 9 C 1.47300 * 120.13527 * 180.02562 * 8 5 4 10 10 O 1.21628 * 119.99836 * 306.57900 * 9 8 5 11 11 N 1.34776 * 120.00442 * 126.58220 * 9 8 5 12 12 C 1.46505 * 119.99453 * 4.88535 * 11 9 8 13 13 C 1.46499 * 120.00371 * 184.88353 * 11 9 8 14 14 H 1.08999 * 109.46641 * 0.02562 * 13 11 9 15 15 C 1.53002 * 109.46901 * 119.99891 * 13 11 9 16 16 C 1.53001 * 109.46732 * 180.02562 * 15 13 11 17 17 C 1.52994 * 109.47187 * 299.99601 * 16 15 13 18 18 H 1.09003 * 109.47463 * 300.00541 * 17 16 15 19 19 O 1.42898 * 109.47231 * 180.02562 * 17 16 15 20 20 C 1.53002 * 109.46959 * 60.00538 * 17 16 15 21 21 C 1.52990 * 109.47303 * 240.00017 * 13 11 9 22 22 C 1.39861 * 119.72812 * 359.73417 * 8 5 4 23 23 C 1.37541 * 119.96634 * 0.51470 * 22 8 5 24 24 C 1.50698 * 119.88021 * 179.75531 * 23 22 8 25 25 O 1.42895 * 109.47327 * 104.73084 * 24 23 22 26 26 Si 1.86294 * 109.47273 * 344.72583 * 24 23 22 27 27 H 1.09003 * 109.47339 * 300.00216 * 1 2 3 28 28 H 1.09008 * 109.47043 * 59.99856 * 1 2 3 29 29 H 1.08996 * 109.47490 * 179.97438 * 1 2 3 30 30 H 1.08005 * 119.98280 * 0.02562 * 4 3 2 31 31 H 1.08991 * 109.47066 * 300.00520 * 7 6 5 32 32 H 1.09000 * 109.46491 * 60.00416 * 7 6 5 33 33 H 1.08995 * 109.46893 * 180.02562 * 7 6 5 34 34 H 1.09004 * 109.46986 * 125.42632 * 12 11 9 35 35 H 1.09002 * 109.46973 * 245.42210 * 12 11 9 36 36 H 1.08991 * 109.47591 * 5.42425 * 12 11 9 37 37 H 1.09000 * 109.47120 * 300.00336 * 15 13 11 38 38 H 1.09003 * 109.47030 * 60.00226 * 15 13 11 39 39 H 1.09004 * 109.46624 * 179.97438 * 16 15 13 40 40 H 1.08999 * 109.46908 * 60.00408 * 16 15 13 41 41 H 0.96705 * 114.00214 * 60.00363 * 19 17 16 42 42 H 1.09000 * 109.47120 * 179.97438 * 20 17 16 43 43 H 1.09003 * 109.47030 * 59.99738 * 20 17 16 44 44 H 1.09003 * 109.47159 * 300.00099 * 21 13 11 45 45 H 1.09004 * 109.47437 * 60.00099 * 21 13 11 46 46 H 1.08004 * 120.01644 * 180.29690 * 22 8 5 47 47 H 1.09004 * 109.46987 * 224.72827 * 24 23 22 48 48 H 0.96706 * 114.00030 * 300.00029 * 25 24 23 49 49 H 1.48505 * 109.99765 * 58.68392 * 26 24 23 50 50 H 1.48497 * 110.00125 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2092 0.0000 4 6 1.2870 2.3705 -0.0005 5 6 1.9119 3.6059 -0.0011 6 8 1.1721 4.7430 -0.0011 7 6 -0.2490 4.5925 -0.0011 8 6 3.3130 3.6776 -0.0016 9 6 3.9865 4.9876 -0.0016 10 8 3.7060 5.8156 -0.8472 11 7 4.9137 5.2687 0.9353 12 6 5.3294 4.2358 1.8875 13 6 5.5058 6.6071 1.0015 14 1 5.0757 7.2336 0.2201 15 6 5.2140 7.2267 2.3697 16 6 5.8318 8.6247 2.4386 17 6 7.3450 8.5240 2.2367 18 1 7.7751 7.8978 3.0183 19 8 7.9222 9.8297 2.3016 20 6 7.6369 7.9044 0.8685 21 6 7.0189 6.5059 0.7998 22 6 4.0677 2.5000 0.0040 23 6 3.4352 1.2787 -0.0006 24 6 4.2503 0.0111 -0.0001 25 8 4.2151 -0.5773 1.3016 26 14 6.0130 0.4061 -0.4557 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 0.2086 2.3112 -0.0005 31 1 -0.5561 4.0432 -0.8909 32 1 -0.5560 4.0433 0.8890 33 1 -0.7185 5.5761 -0.0015 34 1 6.4131 4.1240 1.8521 35 1 5.0268 4.5262 2.8936 36 1 4.8577 3.2889 1.6253 37 1 4.1359 7.2988 2.5134 38 1 5.6436 6.6002 3.1514 39 1 5.6235 9.0663 3.4132 40 1 5.4017 9.2509 1.6569 41 1 7.7762 10.2828 3.1434 42 1 8.7149 7.8331 0.7245 43 1 7.2068 8.5307 0.0869 44 1 7.4486 5.8794 1.5815 45 1 7.2269 6.0645 -0.1749 46 1 5.1466 2.5498 0.0085 47 1 3.8353 -0.6880 -0.7262 48 1 4.5698 -0.0097 1.9996 49 1 6.5801 1.3829 0.5086 50 1 6.8274 -0.8356 -0.4581 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9156390_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:49:50 Heat of formation + Delta-G solvation = -146.212733 kcal Electronic energy + Delta-G solvation = -33361.050557 eV Core-core repulsion = 28935.396053 eV Total energy + Delta-G solvation = -4425.654505 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.181 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.19898 -41.02749 -40.10165 -39.41970 -38.51015 -37.16588 -37.05671 -35.12401 -32.28267 -31.97467 -31.89691 -29.68125 -29.15270 -28.25317 -27.85072 -26.12482 -24.70703 -23.86640 -23.27619 -22.54231 -20.96126 -20.49054 -19.79805 -18.73575 -18.22728 -18.14862 -17.90106 -17.61106 -17.17874 -16.66858 -16.60749 -16.46758 -16.07032 -16.00761 -15.88840 -15.61811 -15.55946 -15.43675 -14.83216 -14.63988 -14.29985 -14.20536 -14.13102 -13.88590 -13.67234 -13.45684 -13.36353 -13.23041 -13.07128 -12.77957 -12.76381 -12.66746 -12.62972 -12.35447 -12.20330 -12.16636 -11.80394 -11.64550 -11.62725 -11.26577 -10.81587 -10.68600 -10.55853 -9.89009 -9.62158 -9.13318 -4.98562 -0.10895 0.09119 1.24372 1.47878 1.72422 1.89606 1.93922 2.04775 2.08998 2.45625 3.20029 3.38788 3.40467 3.49548 3.62217 3.66408 3.72472 3.73814 3.94193 3.98723 4.03409 4.04499 4.07395 4.08698 4.10735 4.14100 4.18014 4.21348 4.27552 4.35338 4.38157 4.42237 4.45047 4.48393 4.53011 4.60743 4.67140 4.79727 4.84761 4.90239 4.97137 5.00728 5.03346 5.06864 5.11108 5.24836 5.29524 5.34071 5.56215 5.97392 6.23930 6.39434 6.44398 6.69454 7.26146 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.295 6.295 3 C 0.217 3.783 4 C -0.307 4.307 5 C 0.224 3.776 6 O -0.295 6.295 7 C 0.023 3.977 8 C -0.199 4.199 9 C 0.575 3.425 10 O -0.520 6.520 11 N -0.609 5.609 12 C 0.059 3.941 13 C 0.140 3.860 14 H 0.106 0.894 15 C -0.124 4.124 16 C -0.149 4.149 17 C 0.104 3.896 18 H 0.055 0.945 19 O -0.568 6.568 20 C -0.110 4.110 21 C -0.125 4.125 22 C -0.020 4.020 23 C -0.191 4.191 24 C -0.056 4.056 25 O -0.523 6.523 26 Si 0.678 3.322 27 H 0.058 0.942 28 H 0.059 0.941 29 H 0.106 0.894 30 H 0.144 0.856 31 H 0.060 0.940 32 H 0.058 0.942 33 H 0.107 0.893 34 H 0.067 0.933 35 H 0.062 0.938 36 H 0.085 0.915 37 H 0.070 0.930 38 H 0.067 0.933 39 H 0.069 0.931 40 H 0.075 0.925 41 H 0.379 0.621 42 H 0.075 0.925 43 H 0.074 0.926 44 H 0.068 0.932 45 H 0.076 0.924 46 H 0.147 0.853 47 H 0.119 0.881 48 H 0.371 0.629 49 H -0.256 1.256 50 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.373 -1.757 2.725 4.018 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.207 6.207 3 C 0.170 3.830 4 C -0.326 4.326 5 C 0.175 3.825 6 O -0.206 6.206 7 C -0.072 4.072 8 C -0.203 4.203 9 C 0.363 3.637 10 O -0.395 6.395 11 N -0.342 5.342 12 C -0.084 4.084 13 C 0.037 3.963 14 H 0.124 0.876 15 C -0.163 4.163 16 C -0.187 4.187 17 C 0.045 3.955 18 H 0.073 0.927 19 O -0.373 6.373 20 C -0.148 4.148 21 C -0.164 4.164 22 C -0.038 4.038 23 C -0.192 4.192 24 C -0.166 4.166 25 O -0.329 6.329 26 Si 0.579 3.421 27 H 0.077 0.923 28 H 0.078 0.922 29 H 0.125 0.875 30 H 0.162 0.838 31 H 0.079 0.921 32 H 0.076 0.924 33 H 0.125 0.875 34 H 0.086 0.914 35 H 0.081 0.919 36 H 0.103 0.897 37 H 0.089 0.911 38 H 0.086 0.914 39 H 0.088 0.912 40 H 0.094 0.906 41 H 0.226 0.774 42 H 0.093 0.907 43 H 0.093 0.907 44 H 0.087 0.913 45 H 0.094 0.906 46 H 0.164 0.836 47 H 0.137 0.863 48 H 0.218 0.782 49 H -0.181 1.181 50 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges -1.651 -1.982 1.571 3.020 hybrid contribution -1.122 0.068 1.909 2.215 sum -2.774 -1.914 3.479 4.844 Atomic orbital electron populations 1.23205 0.77765 1.04773 1.01568 1.86160 1.21758 1.26038 1.86712 1.18668 0.91176 0.83884 0.89318 1.21262 1.01079 0.91420 1.18883 1.18574 0.89539 0.85061 0.89286 1.86197 1.19507 1.28240 1.86640 1.23209 0.77745 1.04695 1.01535 1.18855 0.90610 0.93894 1.16912 1.17895 0.78514 0.86456 0.80819 1.90818 1.63179 1.48805 1.36698 1.47754 1.41242 1.12469 1.32705 1.22158 1.00892 0.92074 0.93288 1.21150 0.93173 0.83119 0.98861 0.87630 1.21800 1.01530 0.95972 0.96979 1.22236 0.96316 0.97286 1.02911 1.21841 0.91623 0.84179 0.97874 0.92703 1.86530 1.79047 1.30277 1.41471 1.21433 1.01745 0.95292 0.96367 1.21848 0.94453 0.97038 1.03024 1.20882 0.99656 0.89726 0.93516 1.19369 0.91262 0.95676 1.12892 1.24757 1.08891 0.94562 0.88360 1.86664 1.84892 1.45082 1.16261 0.94990 0.74815 0.81533 0.90751 0.92346 0.92236 0.87523 0.83810 0.92123 0.92359 0.87493 0.91436 0.91911 0.89676 0.91103 0.91403 0.91225 0.90636 0.77394 0.90658 0.90706 0.91315 0.90566 0.83630 0.86297 0.78188 1.18137 1.17650 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 2 O -0.30 -0.30 9.80 -18.84 -0.18 -0.48 16 3 C 0.22 0.23 6.67 -39.06 -0.26 -0.03 16 4 C -0.31 -0.18 8.01 -39.34 -0.31 -0.50 16 5 C 0.22 0.54 6.68 -38.73 -0.26 0.28 16 6 O -0.29 -0.87 9.66 -23.02 -0.22 -1.09 16 7 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 8 C -0.20 -0.49 5.06 -104.83 -0.53 -1.02 16 9 C 0.57 2.29 6.84 -12.58 -0.09 2.20 16 10 O -0.52 -4.00 16.06 0.89 0.01 -3.98 16 11 N -0.61 -0.76 2.76 -175.25 -0.48 -1.25 16 12 C 0.06 -0.08 9.19 59.85 0.55 0.47 16 13 C 0.14 0.12 2.52 -67.94 -0.17 -0.05 16 14 H 0.11 0.34 6.91 -51.93 -0.36 -0.02 16 15 C -0.12 0.06 5.13 -26.73 -0.14 -0.08 16 16 C -0.15 0.10 5.54 -26.73 -0.15 -0.05 16 17 C 0.10 -0.02 3.47 -26.73 -0.09 -0.11 16 18 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 19 O -0.57 -0.61 13.32 -35.23 -0.47 -1.07 16 20 C -0.11 -0.03 5.58 -26.70 -0.15 -0.18 16 21 C -0.13 0.05 5.12 -26.71 -0.14 -0.09 16 22 C -0.02 -0.01 5.93 -39.23 -0.23 -0.24 16 23 C -0.19 -0.09 5.27 -104.52 -0.55 -0.64 16 24 C -0.06 0.00 2.37 36.00 0.09 0.08 16 25 O -0.52 -0.58 12.88 -35.23 -0.45 -1.04 16 26 Si 0.68 -0.78 30.25 -169.99 -5.14 -5.92 16 27 H 0.06 -0.19 7.65 -51.93 -0.40 -0.59 16 28 H 0.06 -0.20 7.65 -51.92 -0.40 -0.60 16 29 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 30 H 0.14 -0.24 4.50 -52.48 -0.24 -0.47 16 31 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 32 H 0.06 -0.17 7.66 -51.93 -0.40 -0.56 16 33 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 34 H 0.07 -0.17 6.94 -51.93 -0.36 -0.53 16 35 H 0.06 -0.14 7.43 -51.93 -0.39 -0.52 16 36 H 0.08 -0.14 3.92 -51.93 -0.20 -0.34 16 37 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 38 H 0.07 -0.10 7.27 -51.93 -0.38 -0.47 16 39 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 40 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 41 H 0.38 -1.08 9.08 45.56 0.41 -0.67 16 42 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 43 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 44 H 0.07 -0.10 7.01 -51.93 -0.36 -0.46 16 45 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 46 H 0.15 -0.18 3.87 -52.48 -0.20 -0.38 16 47 H 0.12 0.03 7.82 -51.93 -0.41 -0.38 16 48 H 0.37 -0.83 8.70 45.56 0.40 -0.43 16 49 H -0.26 0.20 6.67 56.52 0.38 0.57 16 50 H -0.25 -0.51 7.11 56.52 0.40 -0.10 16 LS Contribution 388.82 15.07 5.86 5.86 Total: 0.00 -9.72 388.82 -8.23 -17.95 By element: Atomic # 1 Polarization: -4.23 SS G_CDS: -6.70 Total: -10.93 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -0.45 Total: 1.96 kcal Atomic # 7 Polarization: -0.76 SS G_CDS: -0.48 Total: -1.25 kcal Atomic # 8 Polarization: -6.35 SS G_CDS: -1.32 Total: -7.67 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.14 Total: -5.92 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -9.72 -8.23 -17.95 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9156390_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.262 kcal (2) G-P(sol) polarization free energy of solvation -9.717 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.979 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.951 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds