Wall clock time and date at job start Mon Mar 8 2021 06:49:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35712 * 116.99843 * 2 1 4 4 C 1.38682 * 119.86789 * 359.97438 * 3 2 1 5 5 C 1.38440 * 120.03696 * 180.02562 * 4 3 2 6 6 O 1.35653 * 120.12372 * 180.02562 * 5 4 3 7 7 C 1.42901 * 117.00038 * 359.97438 * 6 5 4 8 8 C 1.40301 * 119.75656 * 0.02562 * 5 4 3 9 9 C 1.47300 * 120.13527 * 180.02562 * 8 5 4 10 10 O 1.21628 * 119.99836 * 306.57900 * 9 8 5 11 11 N 1.34776 * 120.00442 * 126.58220 * 9 8 5 12 12 C 1.46505 * 119.99453 * 4.88535 * 11 9 8 13 13 C 1.46499 * 120.00371 * 184.88353 * 11 9 8 14 14 H 1.08999 * 109.46641 * 0.02562 * 13 11 9 15 15 C 1.53002 * 109.46901 * 119.99891 * 13 11 9 16 16 C 1.53001 * 109.46732 * 180.02562 * 15 13 11 17 17 C 1.52994 * 109.47187 * 299.99601 * 16 15 13 18 18 H 1.09003 * 109.47463 * 300.00541 * 17 16 15 19 19 O 1.42898 * 109.47231 * 180.02562 * 17 16 15 20 20 C 1.53002 * 109.46959 * 60.00538 * 17 16 15 21 21 C 1.52990 * 109.47303 * 240.00017 * 13 11 9 22 22 C 1.39861 * 119.72812 * 359.73417 * 8 5 4 23 23 C 1.37541 * 119.96634 * 0.51470 * 22 8 5 24 24 C 1.50698 * 119.88021 * 179.75531 * 23 22 8 25 25 O 1.42895 * 109.47327 * 104.73084 * 24 23 22 26 26 Si 1.86294 * 109.47273 * 344.72583 * 24 23 22 27 27 H 1.09003 * 109.47339 * 300.00216 * 1 2 3 28 28 H 1.09008 * 109.47043 * 59.99856 * 1 2 3 29 29 H 1.08996 * 109.47490 * 179.97438 * 1 2 3 30 30 H 1.08005 * 119.98280 * 0.02562 * 4 3 2 31 31 H 1.08991 * 109.47066 * 300.00520 * 7 6 5 32 32 H 1.09000 * 109.46491 * 60.00416 * 7 6 5 33 33 H 1.08995 * 109.46893 * 180.02562 * 7 6 5 34 34 H 1.09004 * 109.46986 * 125.42632 * 12 11 9 35 35 H 1.09002 * 109.46973 * 245.42210 * 12 11 9 36 36 H 1.08991 * 109.47591 * 5.42425 * 12 11 9 37 37 H 1.09000 * 109.47120 * 300.00336 * 15 13 11 38 38 H 1.09003 * 109.47030 * 60.00226 * 15 13 11 39 39 H 1.09004 * 109.46624 * 179.97438 * 16 15 13 40 40 H 1.08999 * 109.46908 * 60.00408 * 16 15 13 41 41 H 0.96705 * 114.00214 * 60.00363 * 19 17 16 42 42 H 1.09000 * 109.47120 * 179.97438 * 20 17 16 43 43 H 1.09003 * 109.47030 * 59.99738 * 20 17 16 44 44 H 1.09003 * 109.47159 * 300.00099 * 21 13 11 45 45 H 1.09004 * 109.47437 * 60.00099 * 21 13 11 46 46 H 1.08004 * 120.01644 * 180.29690 * 22 8 5 47 47 H 1.09004 * 109.46987 * 224.72827 * 24 23 22 48 48 H 0.96706 * 114.00030 * 300.00029 * 25 24 23 49 49 H 1.48505 * 109.99765 * 58.68392 * 26 24 23 50 50 H 1.48497 * 110.00125 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2092 0.0000 4 6 1.2870 2.3705 -0.0005 5 6 1.9119 3.6059 -0.0011 6 8 1.1721 4.7430 -0.0011 7 6 -0.2490 4.5925 -0.0011 8 6 3.3130 3.6776 -0.0016 9 6 3.9865 4.9876 -0.0016 10 8 3.7060 5.8156 -0.8472 11 7 4.9137 5.2687 0.9353 12 6 5.3294 4.2358 1.8875 13 6 5.5058 6.6071 1.0015 14 1 5.0757 7.2336 0.2201 15 6 5.2140 7.2267 2.3697 16 6 5.8318 8.6247 2.4386 17 6 7.3450 8.5240 2.2367 18 1 7.7751 7.8978 3.0183 19 8 7.9222 9.8297 2.3016 20 6 7.6369 7.9044 0.8685 21 6 7.0189 6.5059 0.7998 22 6 4.0677 2.5000 0.0040 23 6 3.4352 1.2787 -0.0006 24 6 4.2503 0.0111 -0.0001 25 8 4.2151 -0.5773 1.3016 26 14 6.0130 0.4061 -0.4557 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 0.2086 2.3112 -0.0005 31 1 -0.5561 4.0432 -0.8909 32 1 -0.5560 4.0433 0.8890 33 1 -0.7185 5.5761 -0.0015 34 1 6.4131 4.1240 1.8521 35 1 5.0268 4.5262 2.8936 36 1 4.8577 3.2889 1.6253 37 1 4.1359 7.2988 2.5134 38 1 5.6436 6.6002 3.1514 39 1 5.6235 9.0663 3.4132 40 1 5.4017 9.2509 1.6569 41 1 7.7762 10.2828 3.1434 42 1 8.7149 7.8331 0.7245 43 1 7.2068 8.5307 0.0869 44 1 7.4486 5.8794 1.5815 45 1 7.2269 6.0645 -0.1749 46 1 5.1466 2.5498 0.0085 47 1 3.8353 -0.6880 -0.7262 48 1 4.5698 -0.0097 1.9996 49 1 6.5801 1.3829 0.5086 50 1 6.8274 -0.8356 -0.4581 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9156390_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:49:49 Heat of formation + Delta-G solvation = -149.109404 kcal Electronic energy + Delta-G solvation = -33361.176166 eV Core-core repulsion = 28935.396053 eV Total energy + Delta-G solvation = -4425.780114 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.181 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.25977 -41.10139 -40.12055 -39.50138 -38.53338 -37.25954 -37.12964 -35.19401 -32.31287 -32.00856 -31.89349 -29.68221 -29.04090 -28.17530 -27.83734 -26.12446 -24.75481 -23.85967 -23.28211 -22.56340 -21.00471 -20.53923 -19.81483 -18.78291 -18.23744 -18.18046 -17.96070 -17.72488 -17.16740 -16.68077 -16.58484 -16.49873 -16.06316 -16.03353 -15.86766 -15.62676 -15.55672 -15.43617 -14.87432 -14.66469 -14.27840 -14.23061 -14.13126 -13.88573 -13.69023 -13.44085 -13.34375 -13.22119 -13.01799 -12.79717 -12.68346 -12.58050 -12.56032 -12.37139 -12.19794 -12.17487 -11.81839 -11.67825 -11.61324 -11.25583 -10.94745 -10.77696 -10.54733 -9.91126 -9.72561 -9.19134 -4.89653 -0.16187 0.04362 1.29649 1.51827 1.54134 1.84795 1.94762 2.08620 2.16276 2.38714 3.26454 3.33815 3.46807 3.50931 3.62291 3.67259 3.73467 3.76517 3.97747 4.08403 4.10727 4.11952 4.16079 4.21190 4.22375 4.25151 4.27922 4.30042 4.30842 4.36447 4.38765 4.53099 4.58241 4.60656 4.63296 4.67964 4.76000 4.79909 4.88723 4.89199 4.98022 4.99574 5.01814 5.07104 5.09872 5.24717 5.28538 5.33603 5.50070 6.00240 6.22154 6.30940 6.59253 6.87842 7.06225 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.312 6.312 3 C 0.210 3.790 4 C -0.302 4.302 5 C 0.210 3.790 6 O -0.323 6.323 7 C 0.014 3.986 8 C -0.216 4.216 9 C 0.570 3.430 10 O -0.571 6.571 11 N -0.603 5.603 12 C 0.051 3.949 13 C 0.138 3.862 14 H 0.073 0.927 15 C -0.116 4.116 16 C -0.144 4.144 17 C 0.105 3.895 18 H 0.072 0.928 19 O -0.589 6.589 20 C -0.111 4.111 21 C -0.116 4.116 22 C -0.009 4.009 23 C -0.190 4.190 24 C -0.062 4.062 25 O -0.542 6.542 26 Si 0.740 3.260 27 H 0.068 0.932 28 H 0.070 0.930 29 H 0.118 0.882 30 H 0.164 0.836 31 H 0.070 0.930 32 H 0.074 0.926 33 H 0.114 0.886 34 H 0.087 0.913 35 H 0.076 0.924 36 H 0.088 0.912 37 H 0.058 0.942 38 H 0.088 0.912 39 H 0.085 0.915 40 H 0.056 0.944 41 H 0.394 0.606 42 H 0.076 0.924 43 H 0.055 0.945 44 H 0.090 0.910 45 H 0.069 0.931 46 H 0.161 0.839 47 H 0.114 0.886 48 H 0.385 0.615 49 H -0.252 1.252 50 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.138 -2.576 4.143 5.327 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.223 6.223 3 C 0.162 3.838 4 C -0.321 4.321 5 C 0.161 3.839 6 O -0.236 6.236 7 C -0.080 4.080 8 C -0.220 4.220 9 C 0.360 3.640 10 O -0.450 6.450 11 N -0.334 5.334 12 C -0.090 4.090 13 C 0.035 3.965 14 H 0.091 0.909 15 C -0.155 4.155 16 C -0.182 4.182 17 C 0.046 3.954 18 H 0.090 0.910 19 O -0.398 6.398 20 C -0.150 4.150 21 C -0.154 4.154 22 C -0.027 4.027 23 C -0.192 4.192 24 C -0.171 4.171 25 O -0.350 6.350 26 Si 0.643 3.357 27 H 0.086 0.914 28 H 0.088 0.912 29 H 0.136 0.864 30 H 0.181 0.819 31 H 0.089 0.911 32 H 0.093 0.907 33 H 0.132 0.868 34 H 0.105 0.895 35 H 0.095 0.905 36 H 0.106 0.894 37 H 0.077 0.923 38 H 0.106 0.894 39 H 0.104 0.896 40 H 0.075 0.925 41 H 0.244 0.756 42 H 0.094 0.906 43 H 0.074 0.926 44 H 0.108 0.892 45 H 0.088 0.912 46 H 0.178 0.822 47 H 0.132 0.868 48 H 0.234 0.766 49 H -0.177 1.177 50 H -0.224 1.224 Dipole moment (debyes) X Y Z Total from point charges -1.426 -2.792 3.040 4.367 hybrid contribution -1.247 0.275 1.487 1.960 sum -2.673 -2.517 4.527 5.828 Atomic orbital electron populations 1.23458 0.76188 1.05966 1.02576 1.86145 1.23524 1.26041 1.86611 1.18851 0.91579 0.84128 0.89200 1.21382 1.02054 0.90535 1.18148 1.18781 0.89717 0.85527 0.89847 1.86165 1.21434 1.29106 1.86847 1.23457 0.75954 1.05727 1.02820 1.18917 0.91026 0.93712 1.18354 1.18214 0.78627 0.86595 0.80606 1.90781 1.64965 1.50418 1.38858 1.47837 1.40214 1.13085 1.32264 1.22400 1.02118 0.91369 0.93151 1.21133 0.93824 0.82756 0.98755 0.90878 1.21733 1.00941 0.96325 0.96488 1.22186 0.96072 0.96891 1.03081 1.21868 0.91666 0.84052 0.97770 0.90965 1.86490 1.79288 1.30967 1.43028 1.21434 1.01612 0.95452 0.96469 1.21766 0.93281 0.96941 1.03415 1.20921 1.00139 0.88903 0.92739 1.19453 0.91342 0.95769 1.12608 1.24915 1.09919 0.94165 0.88055 1.86624 1.85329 1.46036 1.17031 0.94195 0.72259 0.79289 0.89945 0.91351 0.91184 0.86351 0.81892 0.91096 0.90718 0.86753 0.89489 0.90539 0.89397 0.92284 0.89390 0.89649 0.92520 0.75578 0.90567 0.92612 0.89192 0.91237 0.82214 0.86839 0.76633 1.17706 1.22362 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.07 9.80 113.37 1.11 1.04 16 2 O -0.31 -0.53 9.80 -90.33 -0.89 -1.42 16 3 C 0.21 0.42 6.67 22.61 0.15 0.57 16 4 C -0.30 -0.34 8.01 22.42 0.18 -0.16 16 5 C 0.21 1.18 6.68 22.82 0.15 1.34 16 6 O -0.32 -2.35 9.66 -85.51 -0.83 -3.18 16 7 C 0.01 -0.03 9.81 113.37 1.11 1.08 16 8 C -0.22 -1.24 5.06 -20.00 -0.10 -1.34 16 9 C 0.57 5.46 6.84 86.63 0.59 6.05 16 10 O -0.57 -10.49 16.06 0.05 0.00 -10.49 16 11 N -0.60 -1.80 2.76 -826.61 -2.28 -4.08 16 12 C 0.05 -0.21 9.19 127.77 1.17 0.96 16 13 C 0.14 0.37 2.52 44.99 0.11 0.49 16 14 H 0.07 0.70 6.91 -2.39 -0.02 0.68 16 15 C -0.12 0.11 5.13 30.60 0.16 0.27 16 16 C -0.14 0.18 5.54 30.59 0.17 0.35 16 17 C 0.10 -0.08 3.47 30.59 0.11 0.02 16 18 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 19 O -0.59 -1.15 13.32 -148.98 -1.98 -3.13 16 20 C -0.11 -0.12 5.58 30.61 0.17 0.05 16 21 C -0.12 0.09 5.12 30.61 0.16 0.25 16 22 C -0.01 0.00 5.93 22.50 0.13 0.13 16 23 C -0.19 -0.15 5.27 -19.80 -0.10 -0.25 16 24 C -0.06 0.01 2.37 71.24 0.17 0.18 16 25 O -0.54 -1.03 12.88 -148.98 -1.92 -2.95 16 26 Si 0.74 -2.04 30.25 68.60 2.08 0.04 16 27 H 0.07 -0.51 7.65 -2.39 -0.02 -0.53 16 28 H 0.07 -0.54 7.65 -2.38 -0.02 -0.55 16 29 H 0.12 -0.96 8.14 -2.39 -0.02 -0.98 16 30 H 0.16 -0.65 4.50 -2.91 -0.01 -0.66 16 31 H 0.07 -0.34 7.66 -2.39 -0.02 -0.36 16 32 H 0.07 -0.45 7.66 -2.39 -0.02 -0.47 16 33 H 0.11 -0.51 8.14 -2.39 -0.02 -0.53 16 34 H 0.09 -0.66 6.94 -2.38 -0.02 -0.68 16 35 H 0.08 -0.48 7.43 -2.39 -0.02 -0.50 16 36 H 0.09 -0.39 3.92 -2.39 -0.01 -0.40 16 37 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 38 H 0.09 -0.42 7.27 -2.39 -0.02 -0.43 16 39 H 0.08 -0.37 8.14 -2.38 -0.02 -0.39 16 40 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 41 H 0.39 -2.47 9.08 -74.05 -0.67 -3.14 16 42 H 0.08 0.07 8.14 -2.39 -0.02 0.05 16 43 H 0.06 0.26 8.14 -2.39 -0.02 0.24 16 44 H 0.09 -0.43 7.01 -2.39 -0.02 -0.45 16 45 H 0.07 0.05 8.14 -2.38 -0.02 0.04 16 46 H 0.16 -0.52 3.87 -2.91 -0.01 -0.53 16 47 H 0.11 0.08 7.82 -2.39 -0.02 0.06 16 48 H 0.38 -2.00 8.70 -74.05 -0.64 -2.65 16 49 H -0.25 0.87 6.67 99.48 0.66 1.53 16 50 H -0.30 -1.42 7.11 99.48 0.71 -0.72 16 Total: 0.00 -24.95 388.82 -0.71 -25.66 By element: Atomic # 1 Polarization: -11.13 SS G_CDS: -0.33 Total: -11.46 kcal Atomic # 6 Polarization: 5.58 SS G_CDS: 5.44 Total: 11.02 kcal Atomic # 7 Polarization: -1.80 SS G_CDS: -2.28 Total: -4.08 kcal Atomic # 8 Polarization: -15.56 SS G_CDS: -5.61 Total: -21.17 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: 2.08 Total: 0.04 kcal Total: -24.95 -0.71 -25.66 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9156390_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.447 kcal (2) G-P(sol) polarization free energy of solvation -24.953 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.400 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.709 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.662 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.109 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds