Wall clock time and date at job start Mon Mar 8 2021 06:50:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34772 * 119.99766 * 2 1 4 4 O 1.21569 * 120.00251 * 185.22261 * 3 2 1 5 5 C 1.47697 * 120.00013 * 5.23143 * 3 2 1 6 6 C 1.39806 * 120.15491 * 202.51933 * 5 3 2 7 7 F 1.35109 * 120.08134 * 359.95827 * 6 5 3 8 8 C 1.38308 * 119.83311 * 179.97438 * 6 5 3 9 9 C 1.38187 * 120.14495 * 359.97438 * 8 6 5 10 10 C 1.50697 * 119.84052 * 180.02562 * 9 8 6 11 11 O 1.42904 * 109.47525 * 15.00276 * 10 9 8 12 12 Si 1.86305 * 109.47059 * 134.99867 * 10 9 8 13 13 C 1.38650 * 120.31588 * 359.97438 * 9 8 6 14 14 F 1.35096 * 119.91779 * 180.02562 * 13 9 8 15 15 C 1.38068 * 120.16398 * 359.78340 * 13 9 8 16 16 C 1.46497 * 120.00014 * 180.02562 * 2 1 3 17 17 H 1.09006 * 109.46977 * 179.97438 * 16 2 1 18 18 C 1.53000 * 109.47446 * 299.99793 * 16 2 1 19 19 C 1.52998 * 109.47346 * 180.02562 * 18 16 2 20 20 C 1.53004 * 109.47037 * 299.99871 * 19 18 16 21 21 H 1.08993 * 109.46634 * 299.99993 * 20 19 18 22 22 O 1.42895 * 109.46750 * 179.97438 * 20 19 18 23 23 C 1.52998 * 109.46706 * 60.00377 * 20 19 18 24 24 C 1.53003 * 109.47320 * 299.99387 * 23 20 19 25 25 H 1.09004 * 109.46961 * 264.03724 * 1 2 3 26 26 H 1.08998 * 109.47556 * 24.04330 * 1 2 3 27 27 H 1.09001 * 109.46986 * 144.04188 * 1 2 3 28 28 H 1.08007 * 119.92902 * 180.02562 * 8 6 5 29 29 H 1.08997 * 109.47780 * 255.00014 * 10 9 8 30 30 H 0.96694 * 113.99854 * 59.99425 * 11 10 9 31 31 H 1.48494 * 110.00019 * 179.97438 * 12 10 9 32 32 H 1.48493 * 109.99873 * 301.32175 * 12 10 9 33 33 H 1.07998 * 120.07673 * 180.25659 * 15 13 9 34 34 H 1.08996 * 109.46864 * 59.99537 * 18 16 2 35 35 H 1.08996 * 109.46607 * 300.00334 * 18 16 2 36 36 H 1.08997 * 109.47140 * 60.00096 * 19 18 16 37 37 H 1.08997 * 109.46844 * 179.97438 * 19 18 16 38 38 H 0.96702 * 113.99935 * 180.02562 * 22 20 19 39 39 H 1.09003 * 109.46699 * 179.97438 * 23 20 19 40 40 H 1.08994 * 109.47946 * 59.99833 * 23 20 19 41 41 H 1.09006 * 109.47180 * 300.00732 * 24 23 20 42 42 H 1.08997 * 109.47098 * 180.02562 * 24 23 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1388 1.1672 0.0000 4 8 3.3507 1.1695 -0.0958 5 6 1.4049 2.4436 0.1166 6 6 1.9844 3.6312 -0.3399 7 9 3.2189 3.6150 -0.8888 8 6 1.2910 4.8226 -0.2279 9 6 0.0282 4.8405 0.3332 10 6 -0.7214 6.1424 0.4513 11 8 -0.0995 7.1272 -0.3768 12 14 -2.4851 5.8953 -0.0957 13 6 -0.5527 3.6662 0.7869 14 9 -1.7878 3.6929 1.3336 15 6 0.1259 2.4688 0.6769 16 6 2.1975 -1.2687 -0.0006 17 1 3.2692 -1.0695 -0.0009 18 6 1.8280 -2.0716 1.2483 19 6 2.5935 -3.3963 1.2480 20 6 2.2243 -4.1983 -0.0016 21 1 1.1528 -4.3979 -0.0017 22 8 2.9398 -5.4353 -0.0021 23 6 2.5940 -3.3955 -1.2504 24 6 1.8285 -2.0707 -1.2502 25 1 -0.3633 -0.1068 1.0222 26 1 -0.3634 0.9385 -0.4187 27 1 -0.3633 -0.8319 -0.6034 28 1 1.7370 5.7409 -0.5804 29 1 -0.7063 6.4777 1.4883 30 1 -0.0773 6.8948 -1.3151 31 1 -3.2353 7.1719 0.0166 32 1 -2.5183 5.4078 -1.4980 33 1 -0.3296 1.5544 1.0270 34 1 0.7563 -2.2707 1.2483 35 1 2.0913 -1.5004 2.1385 36 1 3.6650 -3.1967 1.2483 37 1 2.3305 -3.9680 2.1380 38 1 2.7546 -5.9964 -0.7676 39 1 2.3314 -3.9670 -2.1406 40 1 3.6655 -3.1959 -1.2502 41 1 0.7568 -2.2703 -1.2505 42 1 2.0915 -1.4990 -2.1401 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9156390_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:50:28 Heat of formation + Delta-G solvation = -152.747250 kcal Electronic energy + Delta-G solvation = -28946.162306 eV Core-core repulsion = 24529.756114 eV Total energy + Delta-G solvation = -4416.406192 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.132 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -50.29754 -50.16566 -41.86189 -40.34162 -39.50725 -37.84593 -37.39752 -35.48867 -33.10838 -31.90481 -31.53616 -29.85540 -28.47161 -27.44490 -24.37539 -24.07107 -23.83687 -22.84300 -21.27422 -20.66072 -19.22194 -18.94437 -18.58972 -18.22436 -17.88666 -17.70618 -17.33902 -17.06193 -16.71239 -16.35242 -16.15824 -15.99412 -15.81263 -15.58688 -15.50676 -15.15349 -14.83006 -14.61066 -14.25763 -14.11061 -14.02890 -13.86274 -13.44370 -13.43386 -13.26900 -13.06248 -12.99329 -12.78541 -12.42637 -12.33740 -12.18993 -11.99729 -11.65546 -11.27367 -11.15402 -11.13280 -10.77267 -10.17189 -9.91587 -9.66895 -4.79535 -0.77238 -0.29269 1.10412 1.42347 1.56163 1.66540 1.90868 2.18843 2.75883 2.81624 3.04212 3.16698 3.27184 3.34755 3.45114 3.60202 3.66754 3.77834 3.97152 4.04635 4.08592 4.19306 4.28762 4.30021 4.34907 4.36425 4.40357 4.41897 4.55778 4.58681 4.61816 4.73478 4.74113 4.79391 4.90507 4.96208 5.00224 5.06910 5.10128 5.24061 5.31849 5.37726 5.44719 6.11359 6.34955 6.86866 6.88649 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 N -0.595 5.595 3 C 0.553 3.447 4 O -0.571 6.571 5 C -0.158 4.158 6 C 0.132 3.868 7 F -0.134 7.134 8 C -0.128 4.128 9 C -0.089 4.089 10 C -0.083 4.083 11 O -0.543 6.543 12 Si 0.752 3.248 13 C 0.086 3.914 14 F -0.089 7.089 15 C -0.087 4.087 16 C 0.137 3.863 17 H 0.069 0.931 18 C -0.113 4.113 19 C -0.114 4.114 20 C 0.105 3.895 21 H 0.077 0.923 22 O -0.591 6.591 23 C -0.146 4.146 24 C -0.118 4.118 25 H 0.097 0.903 26 H 0.097 0.903 27 H 0.098 0.902 28 H 0.165 0.835 29 H 0.145 0.855 30 H 0.390 0.610 31 H -0.290 1.290 32 H -0.279 1.279 33 H 0.207 0.793 34 H 0.098 0.902 35 H 0.068 0.932 36 H 0.051 0.949 37 H 0.076 0.924 38 H 0.394 0.606 39 H 0.085 0.915 40 H 0.052 0.948 41 H 0.096 0.904 42 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.265 -3.568 0.367 9.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 N -0.325 5.325 3 C 0.342 3.658 4 O -0.452 6.452 5 C -0.162 4.162 6 C 0.111 3.889 7 F -0.112 7.112 8 C -0.146 4.146 9 C -0.091 4.091 10 C -0.191 4.191 11 O -0.351 6.351 12 Si 0.655 3.345 13 C 0.067 3.933 14 F -0.067 7.067 15 C -0.105 4.105 16 C 0.034 3.966 17 H 0.088 0.912 18 C -0.151 4.151 19 C -0.152 4.152 20 C 0.046 3.954 21 H 0.095 0.905 22 O -0.400 6.400 23 C -0.184 4.184 24 C -0.156 4.156 25 H 0.115 0.885 26 H 0.115 0.885 27 H 0.117 0.883 28 H 0.182 0.818 29 H 0.163 0.837 30 H 0.240 0.760 31 H -0.217 1.217 32 H -0.205 1.205 33 H 0.223 0.777 34 H 0.116 0.884 35 H 0.087 0.913 36 H 0.070 0.930 37 H 0.095 0.905 38 H 0.244 0.756 39 H 0.104 0.896 40 H 0.071 0.929 41 H 0.115 0.885 42 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -8.953 -2.822 0.865 9.427 hybrid contribution 1.363 0.437 -1.588 2.138 sum -7.590 -2.385 -0.723 7.989 Atomic orbital electron populations 1.22946 0.77087 1.05837 1.04481 1.47791 1.08593 1.04476 1.71681 1.18280 0.86550 0.84326 0.76633 1.90843 1.15546 1.87471 1.51292 1.19744 0.96824 0.92496 1.07158 1.17978 0.80786 0.94064 0.96050 1.91572 1.39882 1.97200 1.82551 1.20836 0.94161 0.97451 1.02168 1.20531 0.94729 0.96105 0.97743 1.25244 1.06937 0.85926 1.01023 1.86595 1.80504 1.44728 1.23242 0.93910 0.74752 0.83225 0.82654 1.17087 0.82555 0.93113 1.00581 1.91237 1.37405 1.95677 1.82378 1.22297 0.91648 0.99974 0.96628 1.21194 0.96846 0.82169 0.96429 0.91234 1.21747 1.02229 0.94418 0.96695 1.21443 1.00385 0.95340 0.98008 1.21891 0.95763 0.83432 0.94284 0.90490 1.86493 1.70971 1.31660 1.50842 1.22199 1.00488 0.96480 0.99257 1.21765 1.02191 0.95116 0.96537 0.88469 0.88460 0.88336 0.81767 0.83722 0.75966 1.21709 1.20536 0.77689 0.88363 0.91330 0.93023 0.90492 0.75561 0.89631 0.92909 0.88544 0.92314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.42 7.76 127.77 0.99 0.57 16 2 N -0.59 1.01 2.76 -826.17 -2.28 -1.27 16 3 C 0.55 3.41 7.48 86.74 0.65 4.06 16 4 O -0.57 -9.38 15.00 -3.93 -0.06 -9.43 16 5 C -0.16 -0.28 5.56 -20.06 -0.11 -0.39 16 6 C 0.13 0.63 7.25 22.67 0.16 0.80 16 7 F -0.13 -1.57 15.80 44.97 0.71 -0.86 16 8 C -0.13 0.03 9.20 22.27 0.20 0.23 16 9 C -0.09 0.30 5.14 -19.78 -0.10 0.20 16 10 C -0.08 0.33 2.96 71.23 0.21 0.54 16 11 O -0.54 0.74 11.63 -148.98 -1.73 -0.99 16 12 Si 0.75 -2.87 29.56 68.60 2.03 -0.84 16 13 C 0.09 -0.51 6.65 22.33 0.15 -0.36 16 14 F -0.09 0.78 13.69 44.97 0.62 1.39 16 15 C -0.09 0.53 7.53 22.57 0.17 0.70 16 16 C 0.14 -0.08 2.52 44.99 0.11 0.03 16 17 H 0.07 0.50 6.91 -2.38 -0.02 0.49 16 18 C -0.11 0.48 5.20 30.59 0.16 0.64 16 19 C -0.11 0.12 5.57 30.59 0.17 0.29 16 20 C 0.10 -0.30 3.47 30.59 0.11 -0.19 16 21 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 22 O -0.59 -0.40 13.32 -148.98 -1.98 -2.39 16 23 C -0.15 0.45 5.54 30.59 0.17 0.62 16 24 C -0.12 0.47 5.17 30.60 0.16 0.63 16 25 H 0.10 -1.57 7.19 -2.38 -0.02 -1.59 16 26 H 0.10 -1.21 4.97 -2.39 -0.01 -1.22 16 27 H 0.10 -1.42 6.46 -2.39 -0.02 -1.44 16 28 H 0.16 -0.29 7.06 -2.91 -0.02 -0.31 16 29 H 0.15 -0.86 7.96 -2.39 -0.02 -0.88 16 30 H 0.39 -2.81 8.42 -74.06 -0.62 -3.44 16 31 H -0.29 -0.99 7.11 99.48 0.71 -0.29 16 32 H -0.28 -0.11 7.11 99.48 0.71 0.59 16 33 H 0.21 -2.63 4.21 -2.91 -0.01 -2.64 16 34 H 0.10 -0.93 7.67 -2.39 -0.02 -0.94 16 35 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 36 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 37 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 38 H 0.39 -2.93 9.08 -74.06 -0.67 -3.61 16 39 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 40 H 0.05 0.08 8.14 -2.39 -0.02 0.07 16 41 H 0.10 -0.88 6.70 -2.38 -0.02 -0.89 16 42 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 Total: 0.00 -23.73 336.61 0.33 -23.40 By element: Atomic # 1 Polarization: -17.20 SS G_CDS: -0.17 Total: -17.36 kcal Atomic # 6 Polarization: 5.16 SS G_CDS: 3.20 Total: 8.37 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -2.28 Total: -1.27 kcal Atomic # 8 Polarization: -9.04 SS G_CDS: -3.78 Total: -12.81 kcal Atomic # 9 Polarization: -0.80 SS G_CDS: 1.33 Total: 0.53 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: 2.03 Total: -0.84 kcal Total: -23.73 0.33 -23.40 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9156390_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.349 kcal (2) G-P(sol) polarization free energy of solvation -23.732 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.398 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds