Wall clock time and date at job start Mon Mar 8 2021 06:50:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35644 * 117.00146 * 2 1 4 4 C 1.40145 * 120.14822 * 180.02562 * 3 2 1 5 5 C 1.47533 * 120.19282 * 0.02562 * 4 3 2 6 6 O 1.21592 * 119.99426 * 48.47951 * 5 4 3 7 7 N 1.34769 * 120.00167 * 228.47894 * 5 4 3 8 8 C 1.46496 * 120.00022 * 355.63391 * 7 5 4 9 9 C 1.46497 * 120.00012 * 175.63243 * 7 5 4 10 10 H 1.08997 * 109.47299 * 0.02562 * 9 7 5 11 11 C 1.53001 * 109.47048 * 120.00080 * 9 7 5 12 12 C 1.53001 * 109.47205 * 180.02562 * 11 9 7 13 13 C 1.53000 * 109.47245 * 300.00153 * 12 11 9 14 14 H 1.09002 * 109.46996 * 299.99812 * 13 12 11 15 15 O 1.42896 * 109.47124 * 180.02562 * 13 12 11 16 16 C 1.52991 * 109.47236 * 59.99793 * 13 12 11 17 17 C 1.52999 * 109.47558 * 239.99873 * 9 7 5 18 18 C 1.39706 * 119.61130 * 180.29640 * 4 3 2 19 19 C 1.37783 * 119.91201 * 359.46567 * 18 4 3 20 20 C 1.50703 * 119.85336 * 180.25699 * 19 18 4 21 21 O 1.42904 * 109.47060 * 65.25416 * 20 19 18 22 22 Si 1.86291 * 109.47461 * 185.25849 * 20 19 18 23 23 C 1.38552 * 120.30215 * 0.51143 * 19 18 4 24 24 C 1.38058 * 120.38412 * 359.76826 * 23 19 18 25 25 H 1.08998 * 109.46974 * 60.00023 * 1 2 3 26 26 H 1.09004 * 109.47403 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.46735 * 300.00568 * 1 2 3 28 28 H 1.08995 * 109.47429 * 274.86546 * 8 7 5 29 29 H 1.09003 * 109.47304 * 34.86765 * 8 7 5 30 30 H 1.08999 * 109.47276 * 154.86742 * 8 7 5 31 31 H 1.08998 * 109.47500 * 299.99907 * 11 9 7 32 32 H 1.09002 * 109.47172 * 60.00181 * 11 9 7 33 33 H 1.09002 * 109.46970 * 59.99981 * 12 11 9 34 34 H 1.09001 * 109.47391 * 179.97438 * 12 11 9 35 35 H 0.96700 * 114.00599 * 60.00064 * 15 13 12 36 36 H 1.08998 * 109.47592 * 180.02562 * 16 13 12 37 37 H 1.09002 * 109.47113 * 60.00090 * 16 13 12 38 38 H 1.09002 * 109.47196 * 300.00146 * 17 9 7 39 39 H 1.09001 * 109.46946 * 59.99703 * 17 9 7 40 40 H 1.08004 * 120.04158 * 179.70026 * 18 4 3 41 41 H 1.09004 * 109.46571 * 305.25741 * 20 19 18 42 42 H 0.96699 * 113.99721 * 60.00127 * 21 20 19 43 43 H 1.48500 * 110.00414 * 179.97438 * 22 20 19 44 44 H 1.48511 * 109.99883 * 301.31613 * 22 20 19 45 45 H 1.07991 * 119.80702 * 179.73866 * 23 19 18 46 46 H 1.08002 * 119.95086 * 179.97438 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 3.4442 1.2855 -0.0005 5 6 4.2551 0.0530 -0.0017 6 8 4.0056 -0.8380 -0.7906 7 7 5.2722 -0.0854 0.8716 8 6 5.6337 1.0246 1.7567 9 6 6.0161 -1.3457 0.9359 10 1 5.6068 -2.0468 0.2086 11 6 7.4899 -1.0847 0.6183 12 6 8.2668 -2.4011 0.6848 13 6 8.1452 -2.9947 2.0897 14 1 8.5551 -2.2938 2.8170 15 8 8.8714 -4.2239 2.1519 16 6 6.6716 -3.2557 2.4073 17 6 5.8946 -1.9387 2.3410 18 6 4.0668 2.5362 0.0057 19 6 3.3039 3.6835 0.0013 20 6 3.9769 5.0319 0.0022 21 8 4.6991 5.2047 -1.2188 22 14 2.6888 6.3688 0.1564 23 6 1.9207 3.6033 0.0013 24 6 1.2926 2.3739 0.0009 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 6.3137 1.6983 1.2354 29 1 4.7337 1.5679 2.0445 30 1 6.1229 0.6335 2.6488 31 1 7.5766 -0.6623 -0.3827 32 1 7.8996 -0.3835 1.3453 33 1 7.8570 -3.1020 -0.0425 34 1 9.3167 -2.2153 0.4581 35 1 9.8150 -4.1334 1.9611 36 1 6.5848 -3.6782 3.4083 37 1 6.2617 -3.9566 1.6800 38 1 6.3043 -1.2375 3.0681 39 1 4.8446 -2.1246 2.5673 40 1 5.1447 2.6035 0.0103 41 1 4.6667 5.0930 0.8441 42 1 4.1471 5.1618 -2.0116 43 1 3.3398 7.7036 0.1592 44 1 1.7236 6.2763 -0.9684 45 1 1.3306 4.5077 0.0020 46 1 0.2139 2.3195 0.0013 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9156390_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:50:33 Heat of formation + Delta-G solvation = -118.691825 kcal Electronic energy + Delta-G solvation = -28501.275221 eV Core-core repulsion = 24551.033923 eV Total energy + Delta-G solvation = -3950.241297 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -41.93061 -40.76235 -39.39596 -39.22820 -37.28903 -37.14710 -35.20964 -32.71325 -31.93045 -31.90298 -29.74607 -28.63082 -27.92290 -26.25010 -25.18223 -23.84020 -23.32298 -22.40066 -20.91284 -20.41800 -19.12882 -18.45109 -18.23528 -18.14377 -17.51385 -17.30147 -16.75115 -16.36207 -16.21011 -16.12790 -15.93244 -15.58939 -15.42952 -14.94050 -14.74345 -14.61761 -14.50542 -14.16216 -14.07105 -13.64435 -13.51833 -13.42810 -13.33452 -13.24029 -12.97875 -12.77763 -12.48725 -12.36938 -12.25866 -12.19952 -12.11594 -11.71068 -11.63744 -11.25927 -10.91987 -10.79438 -10.54222 -10.13673 -9.62674 -9.31787 -5.04743 -0.15340 0.17324 1.20093 1.50948 1.73866 1.88841 1.94377 2.15360 2.53884 3.20055 3.27106 3.40418 3.54054 3.62305 3.65767 3.68647 3.85548 3.98841 4.03249 4.04846 4.10032 4.14995 4.16894 4.19326 4.27941 4.33379 4.37138 4.40115 4.44576 4.49762 4.52478 4.60181 4.65768 4.69225 4.85271 4.91398 4.96286 4.98085 5.04855 5.07809 5.11083 5.23337 5.24989 5.33698 5.49404 5.57016 6.21061 6.33622 6.38914 6.69852 7.24874 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.297 6.297 3 C 0.184 3.816 4 C -0.165 4.165 5 C 0.570 3.430 6 O -0.520 6.520 7 N -0.609 5.609 8 C 0.071 3.929 9 C 0.139 3.861 10 H 0.105 0.895 11 C -0.124 4.124 12 C -0.150 4.150 13 C 0.104 3.896 14 H 0.055 0.945 15 O -0.568 6.568 16 C -0.110 4.110 17 C -0.124 4.124 18 C -0.023 4.023 19 C -0.164 4.164 20 C -0.068 4.068 21 O -0.530 6.530 22 Si 0.683 3.317 23 C -0.054 4.054 24 C -0.209 4.209 25 H 0.060 0.940 26 H 0.105 0.895 27 H 0.060 0.940 28 H 0.059 0.941 29 H 0.075 0.925 30 H 0.076 0.924 31 H 0.070 0.930 32 H 0.068 0.932 33 H 0.075 0.925 34 H 0.070 0.930 35 H 0.379 0.621 36 H 0.075 0.925 37 H 0.074 0.926 38 H 0.069 0.931 39 H 0.074 0.926 40 H 0.140 0.860 41 H 0.119 0.881 42 H 0.377 0.623 43 H -0.256 1.256 44 H -0.260 1.260 45 H 0.134 0.866 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.521 3.722 4.445 5.993 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.209 6.209 3 C 0.136 3.864 4 C -0.169 4.169 5 C 0.358 3.642 6 O -0.395 6.395 7 N -0.342 5.342 8 C -0.072 4.072 9 C 0.036 3.964 10 H 0.123 0.877 11 C -0.163 4.163 12 C -0.188 4.188 13 C 0.045 3.955 14 H 0.073 0.927 15 O -0.373 6.373 16 C -0.148 4.148 17 C -0.163 4.163 18 C -0.042 4.042 19 C -0.164 4.164 20 C -0.178 4.178 21 O -0.336 6.336 22 Si 0.585 3.415 23 C -0.072 4.072 24 C -0.228 4.228 25 H 0.078 0.922 26 H 0.123 0.877 27 H 0.078 0.922 28 H 0.077 0.923 29 H 0.094 0.906 30 H 0.095 0.905 31 H 0.089 0.911 32 H 0.087 0.913 33 H 0.093 0.907 34 H 0.088 0.912 35 H 0.226 0.774 36 H 0.093 0.907 37 H 0.092 0.908 38 H 0.088 0.912 39 H 0.093 0.907 40 H 0.158 0.842 41 H 0.137 0.863 42 H 0.225 0.775 43 H -0.181 1.181 44 H -0.185 1.185 45 H 0.151 0.849 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -2.051 3.564 4.210 5.885 hybrid contribution 0.569 0.200 -1.272 1.408 sum -1.481 3.765 2.938 5.000 Atomic orbital electron populations 1.23208 0.77625 1.04761 1.01608 1.86201 1.21845 1.25905 1.86911 1.18976 0.90700 0.84933 0.91793 1.19171 0.90854 0.94142 1.12728 1.18025 0.79498 0.86320 0.80336 1.90814 1.68597 1.41898 1.38226 1.47761 1.33235 1.14918 1.38243 1.21992 1.01490 0.89442 0.94289 1.21165 0.91404 0.85479 0.98350 0.87749 1.21816 0.94223 0.97577 1.02638 1.22242 1.00833 0.97298 0.98429 1.21838 0.92827 0.85580 0.95254 0.92654 1.86526 1.24829 1.32245 1.93743 1.21433 0.92812 0.97384 1.03219 1.21855 1.01227 0.96646 0.96525 1.21078 1.00368 0.89395 0.93310 1.20069 0.93499 0.95875 1.06994 1.24942 1.03990 0.98970 0.89902 1.86605 1.37438 1.94180 1.15404 0.95099 0.78745 0.77661 0.90035 1.21014 0.93799 0.97413 0.94971 1.21187 1.00630 0.91515 1.09439 0.92182 0.87681 0.92178 0.92275 0.90604 0.90523 0.91084 0.91349 0.90666 0.91175 0.77369 0.90651 0.90762 0.91229 0.90690 0.84247 0.86327 0.77530 1.18098 1.18512 0.84879 0.84218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.30 -0.94 9.52 -28.44 -0.27 -1.21 16 3 C 0.18 0.41 6.67 -38.69 -0.26 0.15 16 4 C -0.17 -0.40 4.92 -104.84 -0.52 -0.92 16 5 C 0.57 2.42 6.97 -12.47 -0.09 2.33 16 6 O -0.52 -4.28 15.85 -4.53 -0.07 -4.35 16 7 N -0.61 -0.73 2.76 -175.17 -0.48 -1.21 16 8 C 0.07 -0.14 8.07 59.84 0.48 0.34 16 9 C 0.14 0.13 2.51 -67.93 -0.17 -0.04 16 10 H 0.10 0.37 6.91 -51.93 -0.36 0.01 16 11 C -0.12 0.06 5.20 -26.73 -0.14 -0.08 16 12 C -0.15 0.09 5.54 -26.73 -0.15 -0.06 16 13 C 0.10 -0.02 3.47 -26.74 -0.09 -0.11 16 14 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 15 O -0.57 -0.64 13.32 -35.23 -0.47 -1.10 16 16 C -0.11 -0.04 5.58 -26.71 -0.15 -0.19 16 17 C -0.12 0.04 5.20 -26.70 -0.14 -0.10 16 18 C -0.02 -0.01 7.39 -39.20 -0.29 -0.29 16 19 C -0.16 0.14 5.35 -104.67 -0.56 -0.42 16 20 C -0.07 0.10 2.79 36.01 0.10 0.20 16 21 O -0.53 -0.19 12.83 -35.23 -0.45 -0.64 16 22 Si 0.68 -1.39 29.87 -169.99 -5.08 -6.47 16 23 C -0.05 0.07 8.65 -39.53 -0.34 -0.27 16 24 C -0.21 0.08 9.03 -39.47 -0.36 -0.28 16 25 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 26 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 27 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 28 H 0.06 -0.17 7.05 -51.93 -0.37 -0.54 16 29 H 0.08 -0.17 6.24 -51.93 -0.32 -0.49 16 30 H 0.08 -0.25 6.44 -51.93 -0.33 -0.58 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.07 -0.11 7.67 -51.93 -0.40 -0.51 16 33 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 35 H 0.38 -1.06 9.08 45.56 0.41 -0.65 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 38 H 0.07 -0.11 6.66 -51.93 -0.35 -0.45 16 39 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 40 H 0.14 -0.10 6.23 -52.48 -0.33 -0.43 16 41 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 42 H 0.38 -0.79 8.70 45.56 0.40 -0.39 16 43 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 44 H -0.26 0.02 7.00 56.52 0.40 0.41 16 45 H 0.13 -0.42 4.81 -52.49 -0.25 -0.67 16 46 H 0.14 -0.36 6.30 -52.49 -0.33 -0.69 16 LS Contribution 359.93 15.07 5.42 5.42 Total: 0.00 -9.55 359.93 -9.09 -18.65 By element: Atomic # 1 Polarization: -4.28 SS G_CDS: -6.02 Total: -10.30 kcal Atomic # 6 Polarization: 2.89 SS G_CDS: -1.67 Total: 1.22 kcal Atomic # 7 Polarization: -0.73 SS G_CDS: -0.48 Total: -1.21 kcal Atomic # 8 Polarization: -6.04 SS G_CDS: -1.26 Total: -7.31 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: -5.08 Total: -6.47 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -9.55 -9.09 -18.65 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9156390_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.046 kcal (2) G-P(sol) polarization free energy of solvation -9.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.094 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.646 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds