Wall clock time and date at job start Mon Mar 8 2021 06:50:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.39280 * 121.03576 * 2 1 4 4 C 1.46499 * 134.19224 * 359.95726 * 3 2 1 5 5 C 1.50692 * 126.60288 * 0.26164 * 4 3 2 6 6 O 1.42896 * 109.47298 * 285.03326 * 5 4 3 7 7 Si 1.86306 * 109.47225 * 165.03095 * 5 4 3 8 8 C 1.34184 * 106.79970 * 180.31064 * 4 3 2 9 9 N 1.36949 * 109.95240 * 359.97438 * 8 4 3 10 10 C 1.37156 * 110.11339 * 359.97438 * 9 8 4 11 11 N 1.32827 * 132.96965 * 180.02562 * 10 9 8 12 12 C 1.31302 * 121.89178 * 179.97438 * 11 10 9 13 13 C 1.39752 * 121.02759 * 179.75873 * 2 1 3 14 14 C 1.47659 * 120.45650 * 359.97181 * 13 2 1 15 15 O 1.21573 * 120.00700 * 310.23210 * 14 13 2 16 16 N 1.34780 * 120.00028 * 130.22836 * 14 13 2 17 17 C 1.46502 * 119.99776 * 4.63121 * 16 14 13 18 18 C 1.46497 * 120.00414 * 184.62397 * 16 14 13 19 19 H 1.09005 * 109.46892 * 0.02562 * 18 16 14 20 20 C 1.53002 * 109.46958 * 120.00233 * 18 16 14 21 21 C 1.52998 * 109.47308 * 180.02562 * 20 18 16 22 22 C 1.53000 * 109.47191 * 300.00003 * 21 20 18 23 23 H 1.08993 * 109.47145 * 300.00059 * 22 21 20 24 24 O 1.42895 * 109.47301 * 179.97438 * 22 21 20 25 25 C 1.53002 * 109.46996 * 59.99806 * 22 21 20 26 26 C 1.52998 * 109.47308 * 300.00122 * 25 22 21 27 27 H 1.08997 * 109.47655 * 265.83133 * 1 2 3 28 28 H 1.09000 * 109.46876 * 25.83149 * 1 2 3 29 29 H 1.08999 * 109.47260 * 145.82445 * 1 2 3 30 30 H 1.08999 * 109.47041 * 45.03573 * 5 4 3 31 31 H 0.96706 * 113.99935 * 299.99343 * 6 5 4 32 32 H 1.48503 * 110.00033 * 179.97438 * 7 5 4 33 33 H 1.48497 * 109.99894 * 301.31791 * 7 5 4 34 34 H 1.08001 * 125.02511 * 180.02562 * 8 4 3 35 35 H 0.96997 * 124.94510 * 179.97438 * 9 8 4 36 36 H 1.08004 * 119.31344 * 180.02562 * 12 11 10 37 37 H 1.08996 * 109.47450 * 84.92659 * 17 16 14 38 38 H 1.09002 * 109.47017 * 324.92156 * 17 16 14 39 39 H 1.09002 * 109.47194 * 204.92340 * 17 16 14 40 40 H 1.09001 * 109.47093 * 300.00275 * 20 18 16 41 41 H 1.09002 * 109.47209 * 60.00393 * 20 18 16 42 42 H 1.09000 * 109.47154 * 180.02562 * 21 20 18 43 43 H 1.09002 * 109.46935 * 59.99894 * 21 20 18 44 44 H 0.96706 * 113.99955 * 60.00745 * 24 22 21 45 45 H 1.09001 * 109.47093 * 180.02562 * 25 22 21 46 46 H 1.09002 * 109.47209 * 60.00061 * 25 22 21 47 47 H 1.09005 * 109.47423 * 300.00231 * 26 25 22 48 48 H 1.09001 * 109.47668 * 179.97438 * 26 25 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1934 0.0000 4 6 1.8515 2.6100 -0.0008 5 6 0.4527 3.1704 0.0036 6 8 -0.1244 3.0211 -1.2951 7 14 0.5089 4.9772 0.4543 8 6 2.9948 3.3125 -0.0073 9 7 4.0669 2.4604 -0.0101 10 6 3.6348 1.1587 -0.0049 11 7 4.2720 -0.0067 -0.0045 12 6 3.6267 -1.1502 0.0017 13 6 2.2273 -1.1976 0.0050 14 6 1.5224 -2.4950 0.0111 15 8 0.6350 -2.7010 0.8162 16 7 1.8627 -3.4510 -0.8759 17 6 2.9979 -3.2424 -1.7782 18 6 1.0976 -4.6988 -0.9377 19 1 0.2980 -4.6717 -0.1973 20 6 0.4936 -4.8580 -2.3344 21 6 -0.3060 -6.1608 -2.3989 22 6 0.6204 -7.3428 -2.1061 23 1 1.4197 -7.3700 -2.8466 24 8 -0.1265 -8.5595 -2.1657 25 6 1.2244 -7.1836 -0.7094 26 6 2.0240 -5.8807 -0.6449 27 1 -0.3634 -0.0747 1.0249 28 1 -0.3633 0.9250 -0.4478 29 1 -0.3634 -0.8502 -0.5773 30 1 -0.1519 2.6325 0.7339 31 1 0.3626 3.4752 -1.9964 32 1 -0.8646 5.5419 0.4616 33 1 1.1360 5.1483 1.7895 34 1 3.0598 4.3906 -0.0091 35 1 4.9965 2.7372 -0.0152 36 1 4.1869 -2.0736 0.0022 37 1 3.9207 -3.5276 -1.2732 38 1 3.0486 -2.1910 -2.0612 39 1 2.8689 -3.8533 -2.6717 40 1 -0.1667 -4.0161 -2.5429 41 1 1.2929 -4.8849 -3.0750 42 1 -0.7359 -6.2744 -3.3941 43 1 -1.1053 -6.1335 -1.6583 44 1 -0.5389 -8.7262 -3.0244 45 1 1.8847 -8.0254 -0.5009 46 1 0.4250 -7.1563 0.0312 47 1 2.8233 -5.9079 -1.3855 48 1 2.4539 -5.7670 0.3502 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9156390_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:50:54 Heat of formation + Delta-G solvation = -42.525660 kcal Electronic energy + Delta-G solvation = -31380.016031 eV Core-core repulsion = 27208.918016 eV Total energy + Delta-G solvation = -4171.098015 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.173 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.85584 -41.38127 -39.80654 -38.66281 -37.81034 -37.23879 -35.23254 -35.00799 -31.99811 -31.93094 -31.36564 -29.55457 -28.80073 -27.91687 -26.46886 -24.75805 -24.05612 -23.84451 -22.94738 -21.09187 -20.69738 -20.32510 -19.30869 -18.56600 -18.23097 -17.73615 -17.48723 -17.38995 -16.80941 -16.39627 -16.29434 -15.96410 -15.61794 -15.58304 -15.46537 -15.12509 -14.81567 -14.66274 -14.21753 -14.18963 -14.02446 -13.87196 -13.82200 -13.56985 -13.49975 -13.42041 -13.28773 -12.98588 -12.91962 -12.78490 -12.38192 -12.23717 -12.20241 -12.07232 -11.66510 -11.29725 -11.16776 -11.04273 -10.81120 -10.57868 -10.20745 -9.68180 -9.53715 -9.13431 -5.14451 -0.17622 0.01229 1.22347 1.37568 1.56681 1.64953 1.70614 1.92497 1.94059 2.75912 3.18594 3.28919 3.41691 3.46957 3.52641 3.59793 3.63551 3.65599 3.75818 3.95922 4.02563 4.05818 4.12557 4.15277 4.22073 4.25803 4.29870 4.32633 4.37215 4.43982 4.46867 4.57795 4.62295 4.67526 4.71635 4.83077 4.83526 4.93718 4.95965 5.03505 5.06119 5.09201 5.16127 5.22441 5.30583 5.35056 5.37388 5.52883 5.77071 6.11073 6.31276 6.57243 6.68566 6.87872 7.16752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C 0.070 3.930 3 C -0.144 4.144 4 C -0.184 4.184 5 C -0.036 4.036 6 O -0.539 6.539 7 Si 0.687 3.313 8 C 0.072 3.928 9 N -0.571 5.571 10 C 0.304 3.696 11 N -0.501 5.501 12 C 0.176 3.824 13 C -0.222 4.222 14 C 0.576 3.424 15 O -0.526 6.526 16 N -0.607 5.607 17 C 0.071 3.929 18 C 0.138 3.862 19 H 0.105 0.895 20 C -0.125 4.125 21 C -0.149 4.149 22 C 0.104 3.896 23 H 0.056 0.944 24 O -0.568 6.568 25 C -0.111 4.111 26 C -0.124 4.124 27 H 0.084 0.916 28 H 0.092 0.908 29 H 0.071 0.929 30 H 0.115 0.885 31 H 0.378 0.622 32 H -0.253 1.253 33 H -0.255 1.255 34 H 0.186 0.814 35 H 0.425 0.575 36 H 0.166 0.834 37 H 0.061 0.939 38 H 0.073 0.927 39 H 0.078 0.922 40 H 0.071 0.929 41 H 0.069 0.931 42 H 0.070 0.930 43 H 0.075 0.925 44 H 0.379 0.621 45 H 0.075 0.925 46 H 0.074 0.926 47 H 0.069 0.931 48 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.786 3.935 -5.643 7.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.062 3.938 3 C -0.151 4.151 4 C -0.192 4.192 5 C -0.147 4.147 6 O -0.345 6.345 7 Si 0.588 3.412 8 C -0.054 4.054 9 N -0.177 5.177 10 C 0.071 3.929 11 N -0.214 5.214 12 C 0.008 3.992 13 C -0.229 4.229 14 C 0.363 3.637 15 O -0.402 6.402 16 N -0.340 5.340 17 C -0.072 4.072 18 C 0.035 3.965 19 H 0.123 0.877 20 C -0.164 4.164 21 C -0.188 4.188 22 C 0.045 3.955 23 H 0.074 0.926 24 O -0.373 6.373 25 C -0.149 4.149 26 C -0.162 4.162 27 H 0.103 0.897 28 H 0.110 0.890 29 H 0.090 0.910 30 H 0.132 0.868 31 H 0.226 0.774 32 H -0.177 1.177 33 H -0.179 1.179 34 H 0.203 0.797 35 H 0.264 0.736 36 H 0.183 0.817 37 H 0.080 0.920 38 H 0.092 0.908 39 H 0.096 0.904 40 H 0.090 0.910 41 H 0.087 0.913 42 H 0.089 0.911 43 H 0.094 0.906 44 H 0.226 0.774 45 H 0.094 0.906 46 H 0.092 0.908 47 H 0.088 0.912 48 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 3.849 4.231 -3.685 6.804 hybrid contribution -0.346 -0.446 -0.459 0.727 sum 3.503 3.785 -4.144 6.616 Atomic orbital electron populations 1.21044 0.89328 1.04346 1.03641 1.19740 0.96647 0.89265 0.88161 1.19409 0.92837 0.93389 1.09459 1.20650 0.95293 0.91072 1.12168 1.24450 0.90411 1.10793 0.89074 1.86501 1.53775 1.77893 1.16290 0.95309 0.84347 0.76605 0.84956 1.21723 0.85002 0.95772 1.02930 1.41497 1.09576 1.02694 1.63912 1.18483 0.89293 0.85909 0.99238 1.66484 1.40433 0.95963 1.18547 1.22644 0.89888 0.94574 0.92046 1.20408 0.95142 0.93544 1.13845 1.17979 0.82393 0.83015 0.80277 1.90804 1.31405 1.80304 1.37730 1.47797 1.32278 1.17091 1.36833 1.21976 0.88333 1.02843 0.94082 1.21192 0.94571 0.82264 0.98451 0.87658 1.21831 0.99961 0.97918 0.96659 1.22239 0.99218 0.94554 1.02761 1.21842 0.92566 0.83413 0.97698 0.92644 1.86532 1.70834 1.40918 1.39048 1.21431 1.00129 0.97294 0.96047 1.21840 0.98222 0.93214 1.02948 0.89713 0.88964 0.91024 0.86773 0.77445 1.17703 1.17941 0.79747 0.73599 0.81677 0.92025 0.90837 0.90375 0.91045 0.91268 0.91147 0.90640 0.77369 0.90642 0.90759 0.91225 0.90642 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.36 8.58 36.00 0.31 -0.05 16 2 C 0.07 0.22 5.97 -103.67 -0.62 -0.39 16 3 C -0.14 -0.36 6.16 -105.13 -0.65 -1.00 16 4 C -0.18 0.02 5.57 -102.73 -0.57 -0.55 16 5 C -0.04 0.03 1.88 36.00 0.07 0.10 16 6 O -0.54 0.37 11.62 -35.23 -0.41 -0.04 16 7 Si 0.69 -1.63 30.77 -169.99 -5.23 -6.86 16 8 C 0.07 -0.18 10.44 -16.69 -0.17 -0.35 16 9 N -0.57 0.66 6.04 -12.11 -0.07 0.59 16 10 C 0.30 0.66 8.42 -155.71 -1.31 -0.65 16 11 N -0.50 -1.38 10.37 -11.96 -0.12 -1.50 16 12 C 0.18 0.29 8.96 -17.11 -0.15 0.14 16 13 C -0.22 -0.62 4.87 -104.82 -0.51 -1.13 16 14 C 0.58 1.92 6.39 -12.41 -0.08 1.84 16 15 O -0.53 -3.52 15.29 5.30 0.08 -3.44 16 16 N -0.61 -0.31 2.76 -175.11 -0.48 -0.79 16 17 C 0.07 -0.15 8.10 59.85 0.49 0.33 16 18 C 0.14 0.04 2.51 -67.93 -0.17 -0.13 16 19 H 0.11 0.28 6.91 -51.93 -0.36 -0.08 16 20 C -0.13 0.13 5.19 -26.73 -0.14 -0.01 16 21 C -0.15 0.16 5.54 -26.73 -0.15 0.01 16 22 C 0.10 -0.05 3.47 -26.73 -0.09 -0.14 16 23 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 24 O -0.57 -0.52 13.32 -35.23 -0.47 -0.99 16 25 C -0.11 -0.01 5.57 -26.73 -0.15 -0.16 16 26 C -0.12 0.09 5.21 -26.73 -0.14 -0.05 16 27 H 0.08 0.28 8.14 -51.93 -0.42 -0.15 16 28 H 0.09 0.21 4.91 -51.93 -0.26 -0.04 16 29 H 0.07 0.24 7.16 -51.93 -0.37 -0.13 16 30 H 0.12 0.04 7.18 -51.93 -0.37 -0.33 16 31 H 0.38 -1.75 8.70 45.56 0.40 -1.35 16 32 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 33 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 34 H 0.19 -1.20 6.35 -52.49 -0.33 -1.53 16 35 H 0.43 -1.57 8.96 -40.82 -0.37 -1.94 16 36 H 0.17 -0.14 6.35 -52.48 -0.33 -0.47 16 37 H 0.06 -0.21 7.10 -51.93 -0.37 -0.58 16 38 H 0.07 -0.13 6.29 -51.93 -0.33 -0.45 16 39 H 0.08 -0.27 6.44 -51.93 -0.33 -0.60 16 40 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 41 H 0.07 -0.15 6.66 -51.93 -0.35 -0.49 16 42 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 43 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 44 H 0.38 -1.14 9.08 45.56 0.41 -0.73 16 45 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 46 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 47 H 0.07 -0.13 7.67 -51.93 -0.40 -0.53 16 48 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 372.12 15.07 5.61 5.61 Total: 0.00 -10.60 372.12 -11.08 -21.68 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -5.93 Total: -12.07 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -4.04 Total: -2.18 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -0.68 Total: -1.70 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.80 Total: -4.47 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.23 Total: -6.86 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -10.60 -11.08 -21.68 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9156390_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.847 kcal (2) G-P(sol) polarization free energy of solvation -10.599 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.446 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.080 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.678 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.526 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds