Wall clock time and date at job start Mon Mar 8 2021 06:51:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46507 * 1 3 3 C 1.34775 * 120.00323 * 2 1 4 4 O 1.21629 * 120.00044 * 186.51761 * 3 2 1 5 5 C 1.47267 * 119.99705 * 6.51434 * 3 2 1 6 6 C 1.36764 * 126.94548 * 7.91431 * 5 3 2 7 7 N 1.34662 * 108.39759 * 179.87079 * 6 5 3 8 8 C 1.46499 * 124.84932 * 180.18107 * 7 6 5 9 9 C 1.36442 * 110.29533 * 0.40959 * 7 6 5 10 10 C 1.50706 * 125.57131 * 179.72462 * 9 7 6 11 11 O 1.42898 * 109.46737 * 30.00431 * 10 9 7 12 12 Si 1.86296 * 109.46992 * 150.00212 * 10 9 7 13 13 C 1.34484 * 108.86050 * 359.75090 * 9 7 6 14 14 C 1.46501 * 119.99796 * 180.02562 * 2 1 3 15 15 H 1.08991 * 109.47256 * 180.02562 * 14 2 1 16 16 C 1.53001 * 109.47082 * 299.99888 * 14 2 1 17 17 C 1.52999 * 109.46791 * 179.97438 * 16 14 2 18 18 C 1.52992 * 109.47442 * 299.99779 * 17 16 14 19 19 H 1.09001 * 109.47384 * 300.00418 * 18 17 16 20 20 O 1.42900 * 109.47147 * 179.97438 * 18 17 16 21 21 C 1.53001 * 109.46947 * 60.00317 * 18 17 16 22 22 C 1.53000 * 109.47236 * 299.99779 * 21 18 17 23 23 H 1.09003 * 109.46900 * 275.89994 * 1 2 3 24 24 H 1.09006 * 109.46721 * 35.89008 * 1 2 3 25 25 H 1.08989 * 109.47376 * 155.89180 * 1 2 3 26 26 H 1.08006 * 125.79966 * 359.97438 * 6 5 3 27 27 H 1.08994 * 109.47400 * 270.26198 * 8 7 6 28 28 H 1.09003 * 109.46951 * 30.26910 * 8 7 6 29 29 H 1.09003 * 109.46551 * 150.26302 * 8 7 6 30 30 H 1.09002 * 109.47289 * 270.00691 * 10 9 7 31 31 H 0.96702 * 114.00238 * 59.99920 * 11 10 9 32 32 H 1.48500 * 110.00077 * 58.68544 * 12 10 9 33 33 H 1.48506 * 109.99586 * 180.02562 * 12 10 9 34 34 H 1.08000 * 126.83665 * 179.97438 * 13 9 7 35 35 H 1.09001 * 109.46996 * 59.99920 * 16 14 2 36 36 H 1.08995 * 109.47193 * 299.99713 * 16 14 2 37 37 H 1.09001 * 109.47173 * 60.00326 * 17 16 14 38 38 H 1.09004 * 109.46440 * 179.97438 * 17 16 14 39 39 H 0.96698 * 114.00152 * 179.97438 * 20 18 17 40 40 H 1.09001 * 109.46996 * 59.99864 * 21 18 17 41 41 H 1.09005 * 109.47156 * 179.97438 * 21 18 17 42 42 H 1.08992 * 109.47063 * 179.97438 * 22 21 18 43 43 H 1.09000 * 109.46816 * 300.00345 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1390 1.1671 0.0000 4 8 3.3494 1.1705 -0.1196 5 6 1.4098 2.4384 0.1447 6 6 0.0830 2.5964 0.4364 7 7 -0.1881 3.9147 0.4820 8 6 -1.5044 4.4891 0.7707 9 6 0.9373 4.6387 0.2158 10 6 1.0221 6.1428 0.1718 11 8 0.0611 6.7005 1.0703 12 14 2.7318 6.6834 0.6771 13 6 1.9585 3.7910 -0.0013 14 6 2.1975 -1.2688 -0.0006 15 1 3.2691 -1.0697 0.0000 16 6 1.8279 -2.0716 1.2483 17 6 2.5924 -3.3969 1.2474 18 6 2.2222 -4.1984 -0.0021 19 1 1.1504 -4.3971 -0.0020 20 8 2.9367 -5.4359 -0.0033 21 6 2.5918 -3.3955 -1.2510 22 6 1.8273 -2.0702 -1.2502 23 1 -0.3633 0.1056 1.0223 24 1 -0.3633 0.8326 -0.6025 25 1 -0.3633 -0.9379 -0.4197 26 1 -0.6264 1.7993 0.6036 27 1 -2.0577 4.6157 -0.1598 28 1 -2.0551 3.8210 1.4330 29 1 -1.3798 5.4582 1.2540 30 1 0.8161 6.4888 -0.8411 31 1 0.1837 6.4346 1.9920 32 1 3.7430 6.0843 -0.2305 33 1 2.8282 8.1648 0.6383 34 1 2.9793 4.0537 -0.2367 35 1 0.7562 -2.2707 1.2483 36 1 2.0913 -1.5005 2.1385 37 1 3.6641 -3.1981 1.2472 38 1 2.3294 -3.9686 2.1374 39 1 2.7501 -5.9971 -0.7684 40 1 3.6635 -3.1968 -1.2512 41 1 2.3284 -3.9667 -2.1413 42 1 2.0910 -1.4982 -2.1397 43 1 0.7556 -2.2691 -1.2500 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9156390_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:51:21 Heat of formation + Delta-G solvation = -47.437697 kcal Electronic energy + Delta-G solvation = -24652.167299 eV Core-core repulsion = 21086.498234 eV Total energy + Delta-G solvation = -3565.669065 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.57586 -40.95555 -39.33274 -37.92149 -37.12468 -35.26139 -33.76327 -31.90408 -31.70170 -29.70400 -28.22101 -27.41519 -26.28120 -24.01985 -23.80871 -22.31198 -20.94903 -20.60698 -20.34707 -18.58131 -18.21339 -17.61456 -17.21137 -16.89448 -16.85083 -16.20066 -15.87333 -15.72990 -15.54611 -15.41568 -14.97679 -14.76442 -14.52761 -14.28112 -14.08733 -13.97917 -13.56681 -13.43960 -13.41312 -13.27198 -13.11044 -12.94398 -12.61055 -12.37033 -12.20776 -12.14228 -11.93908 -11.60708 -11.26866 -10.81291 -10.77043 -10.65891 -9.67073 -9.47383 -9.20612 -5.01277 0.78231 1.04243 1.39724 1.64101 1.83771 1.98856 2.11940 2.65782 3.11634 3.20785 3.47915 3.57450 3.67591 3.73957 3.80305 3.95158 3.98720 4.08611 4.15370 4.17054 4.20703 4.28397 4.32891 4.34246 4.39192 4.42997 4.44957 4.55486 4.59054 4.63253 4.85245 4.85550 4.97025 4.99921 5.04269 5.07884 5.11809 5.25995 5.35114 5.57703 5.75036 5.97569 6.15845 6.28622 6.50797 6.69785 7.43760 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.612 5.612 3 C 0.591 3.409 4 O -0.541 6.541 5 C -0.226 4.226 6 C 0.034 3.966 7 N -0.426 5.426 8 C 0.049 3.951 9 C -0.021 4.021 10 C -0.042 4.042 11 O -0.542 6.542 12 Si 0.715 3.285 13 C -0.137 4.137 14 C 0.140 3.860 15 H 0.105 0.895 16 C -0.123 4.123 17 C -0.111 4.111 18 C 0.104 3.896 19 H 0.055 0.945 20 O -0.568 6.568 21 C -0.150 4.150 22 C -0.125 4.125 23 H 0.059 0.941 24 H 0.080 0.920 25 H 0.075 0.925 26 H 0.187 0.813 27 H 0.072 0.928 28 H 0.081 0.919 29 H 0.114 0.886 30 H 0.117 0.883 31 H 0.381 0.619 32 H -0.251 1.251 33 H -0.252 1.252 34 H 0.151 0.849 35 H 0.067 0.933 36 H 0.074 0.926 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.379 0.621 40 H 0.075 0.925 41 H 0.069 0.931 42 H 0.071 0.929 43 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.705 -0.242 1.986 6.997 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.345 5.345 3 C 0.382 3.618 4 O -0.419 6.419 5 C -0.236 4.236 6 C -0.101 4.101 7 N -0.100 5.100 8 C -0.091 4.091 9 C -0.130 4.130 10 C -0.152 4.152 11 O -0.348 6.348 12 Si 0.615 3.385 13 C -0.161 4.161 14 C 0.037 3.963 15 H 0.123 0.877 16 C -0.162 4.162 17 C -0.149 4.149 18 C 0.045 3.955 19 H 0.073 0.927 20 O -0.373 6.373 21 C -0.188 4.188 22 C -0.163 4.163 23 H 0.078 0.922 24 H 0.098 0.902 25 H 0.094 0.906 26 H 0.204 0.796 27 H 0.091 0.909 28 H 0.100 0.900 29 H 0.132 0.868 30 H 0.135 0.865 31 H 0.229 0.771 32 H -0.175 1.175 33 H -0.177 1.177 34 H 0.169 0.831 35 H 0.086 0.914 36 H 0.093 0.907 37 H 0.093 0.907 38 H 0.093 0.907 39 H 0.226 0.774 40 H 0.094 0.906 41 H 0.088 0.912 42 H 0.090 0.910 43 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -5.637 0.896 1.764 5.974 hybrid contribution -0.993 -0.583 -1.122 1.608 sum -6.630 0.313 0.642 6.668 Atomic orbital electron populations 1.22260 0.80464 1.03677 1.01495 1.47659 1.06515 1.05593 1.74747 1.17461 0.86489 0.82417 0.75392 1.90776 1.13958 1.86983 1.50155 1.20257 0.93385 0.93159 1.16823 1.23010 0.97110 0.85770 1.04248 1.43599 1.08835 1.05369 1.52210 1.22562 0.81462 1.02197 1.02914 1.20757 0.86684 0.94211 1.11344 1.24830 1.05786 0.87634 0.96996 1.86445 1.54006 1.73081 1.21262 0.94041 0.73584 0.79930 0.90986 1.21720 0.98505 0.90054 1.05807 1.21138 0.98631 0.82190 0.94382 0.87705 1.21840 1.00645 0.95450 0.98226 1.21429 1.01558 0.94651 0.97266 1.21839 0.94805 0.83911 0.94935 0.92713 1.86529 1.70308 1.30883 1.49623 1.22243 1.01851 0.96281 0.98435 1.21825 1.00499 0.95725 0.98281 0.92237 0.90184 0.90588 0.79606 0.90892 0.90005 0.86800 0.86529 0.77103 1.17517 1.17651 0.83142 0.91419 0.90710 0.90743 0.90698 0.77388 0.90624 0.91241 0.91042 0.91467 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.17 7.69 59.85 0.46 0.29 16 2 N -0.61 -0.58 2.76 -175.26 -0.48 -1.07 16 3 C 0.59 2.52 7.65 -12.59 -0.10 2.43 16 4 O -0.54 -4.46 16.33 5.25 0.09 -4.37 16 5 C -0.23 -0.60 6.10 -103.35 -0.63 -1.23 16 6 C 0.03 -0.02 9.26 -16.84 -0.16 -0.17 16 7 N -0.43 0.31 3.09 -119.90 -0.37 -0.06 16 8 C 0.05 -0.17 10.71 59.85 0.64 0.47 16 9 C -0.02 -0.01 6.14 -81.87 -0.50 -0.51 16 10 C -0.04 0.04 2.98 36.01 0.11 0.14 16 11 O -0.54 1.03 9.95 -35.23 -0.35 0.68 16 12 Si 0.72 -0.69 31.29 -169.99 -5.32 -6.01 16 13 C -0.14 -0.37 9.51 -37.50 -0.36 -0.73 16 14 C 0.14 0.11 2.51 -67.93 -0.17 -0.06 16 15 H 0.10 0.36 6.92 -51.93 -0.36 0.00 16 16 C -0.12 0.07 5.21 -26.73 -0.14 -0.07 16 17 C -0.11 -0.02 5.57 -26.74 -0.15 -0.17 16 18 C 0.10 -0.03 3.47 -26.73 -0.09 -0.12 16 19 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 20 O -0.57 -0.59 13.32 -35.23 -0.47 -1.06 16 21 C -0.15 0.10 5.54 -26.73 -0.15 -0.05 16 22 C -0.12 0.07 5.19 -26.73 -0.14 -0.07 16 23 H 0.06 -0.25 7.30 -51.93 -0.38 -0.63 16 24 H 0.08 -0.25 5.47 -51.93 -0.28 -0.53 16 25 H 0.08 -0.29 6.44 -51.94 -0.33 -0.63 16 26 H 0.19 -0.67 4.46 -52.48 -0.23 -0.90 16 27 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 28 H 0.08 -0.43 8.13 -51.93 -0.42 -0.85 16 29 H 0.11 -0.43 4.93 -51.93 -0.26 -0.69 16 30 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 31 H 0.38 -2.03 8.38 45.56 0.38 -1.65 16 32 H -0.25 -0.49 6.77 56.52 0.38 -0.11 16 33 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 34 H 0.15 0.49 6.67 -52.49 -0.35 0.14 16 35 H 0.07 -0.12 7.67 -51.93 -0.40 -0.52 16 36 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 37 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 38 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 39 H 0.38 -1.09 9.08 45.56 0.41 -0.68 16 40 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 42 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 43 H 0.07 -0.12 6.67 -51.93 -0.35 -0.47 16 LS Contribution 333.36 15.07 5.02 5.02 Total: 0.00 -9.45 333.36 -8.83 -18.29 By element: Atomic # 1 Polarization: -5.98 SS G_CDS: -5.58 Total: -11.56 kcal Atomic # 6 Polarization: 1.52 SS G_CDS: -1.37 Total: 0.15 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.85 Total: -1.13 kcal Atomic # 8 Polarization: -4.02 SS G_CDS: -0.73 Total: -4.76 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.32 Total: -6.01 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -9.45 -8.83 -18.29 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9156390_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.150 kcal (2) G-P(sol) polarization free energy of solvation -9.453 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.603 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.835 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.288 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.438 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds