Wall clock time and date at job start Mon Mar 8 2021 06:51:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.34782 * 119.99786 * 2 1 4 4 O 1.21585 * 120.00013 * 176.52205 * 3 2 1 5 5 C 1.47531 * 120.00000 * 356.78375 * 3 2 1 6 6 C 1.40136 * 120.19035 * 153.04750 * 5 3 2 7 7 O 1.35652 * 120.14959 * 359.97438 * 6 5 3 8 8 C 1.38719 * 119.69961 * 180.02562 * 6 5 3 9 9 C 1.38054 * 120.08326 * 359.97438 * 8 6 5 10 10 C 1.50696 * 119.80581 * 180.02562 * 9 8 6 11 11 O 1.42899 * 109.47195 * 64.99982 * 10 9 8 12 12 Si 1.86295 * 109.47459 * 184.99932 * 10 9 8 13 13 C 1.38549 * 120.38964 * 359.97438 * 9 8 6 14 14 C 1.37787 * 120.30470 * 359.76458 * 13 9 8 15 15 C 1.46501 * 120.00402 * 179.97438 * 2 1 3 16 16 H 1.08997 * 109.47429 * 179.97438 * 15 2 1 17 17 C 1.53000 * 109.47266 * 300.00237 * 15 2 1 18 18 C 1.52998 * 109.47084 * 179.97438 * 17 15 2 19 19 C 1.52996 * 109.47524 * 300.00312 * 18 17 15 20 20 H 1.09001 * 109.47079 * 299.99537 * 19 18 17 21 21 O 1.42901 * 109.47493 * 179.97438 * 19 18 17 22 22 C 1.53000 * 109.47194 * 59.99756 * 19 18 17 23 23 C 1.52999 * 109.46582 * 60.00182 * 15 2 1 24 24 H 1.09000 * 109.47306 * 96.05300 * 1 2 3 25 25 H 1.09004 * 109.46597 * 216.04684 * 1 2 3 26 26 H 1.08999 * 109.47470 * 336.04427 * 1 2 3 27 27 H 0.96699 * 113.99657 * 90.00290 * 7 6 5 28 28 H 1.07993 * 119.95411 * 180.02562 * 8 6 5 29 29 H 1.09006 * 109.47175 * 305.00285 * 10 9 8 30 30 H 0.96694 * 114.00416 * 180.02562 * 11 10 9 31 31 H 1.48493 * 110.00119 * 300.00296 * 12 10 9 32 32 H 1.48502 * 109.99747 * 61.31811 * 12 10 9 33 33 H 1.08004 * 119.84713 * 180.02562 * 13 9 8 34 34 H 1.07997 * 120.04995 * 180.27088 * 14 13 9 35 35 H 1.08994 * 109.46967 * 299.99863 * 17 15 2 36 36 H 1.09009 * 109.46971 * 59.99837 * 17 15 2 37 37 H 1.08999 * 109.47107 * 180.02562 * 18 17 15 38 38 H 1.09009 * 109.46837 * 60.00383 * 18 17 15 39 39 H 0.96703 * 114.00019 * 59.99735 * 21 19 18 40 40 H 1.09002 * 109.47517 * 180.02562 * 22 19 18 41 41 H 1.09001 * 109.47286 * 59.99908 * 22 19 18 42 42 H 1.09001 * 109.47337 * 299.99635 * 23 15 2 43 43 H 1.08999 * 109.47115 * 60.00130 * 23 15 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1388 1.1673 0.0000 4 8 3.3530 1.1683 0.0639 5 6 1.4029 2.4439 -0.0717 6 6 1.9590 3.6094 0.4725 7 8 3.1769 3.5692 1.0685 8 6 1.2578 4.8042 0.3999 9 6 0.0182 4.8434 -0.2065 10 6 -0.7377 6.1448 -0.2824 11 8 -0.0193 7.0656 -1.1057 12 14 -2.4237 5.8419 -1.0146 13 6 -0.5345 3.6934 -0.7466 14 6 0.1503 2.4992 -0.6882 15 6 2.1976 -1.2687 0.0006 16 1 3.2692 -1.0695 0.0000 17 6 1.8280 -2.0705 1.2501 18 6 2.5926 -3.3957 1.2504 19 6 2.2226 -4.1983 0.0015 20 1 1.1509 -4.3973 0.0017 21 8 2.9372 -5.4358 0.0014 22 6 2.5922 -3.3965 -1.2481 23 6 1.8279 -2.0714 -1.2484 24 1 -0.3634 -0.1084 -1.0219 25 1 -0.3633 -0.8310 0.6048 26 1 -0.3634 0.9391 0.4172 27 1 3.9150 3.7357 0.4664 28 1 1.6827 5.7049 0.8176 29 1 -0.8460 6.5611 0.7192 30 1 -0.4484 7.9271 -1.1993 31 1 -2.2899 5.2744 -2.3803 32 1 -3.1928 4.9105 -0.1507 33 1 -1.5047 3.7342 -1.2194 34 1 -0.2825 1.6062 -1.1145 35 1 2.0913 -1.4986 2.1398 36 1 0.7563 -2.2697 1.2502 37 1 2.3290 -3.9671 2.1403 38 1 3.6644 -3.1968 1.2501 39 1 2.7518 -5.9972 0.7666 40 1 2.3282 -3.9680 -2.1379 41 1 3.6639 -3.1975 -1.2484 42 1 0.7563 -2.2707 -1.2483 43 1 2.0913 -1.5002 -2.1386 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9156390_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:51:42 Heat of formation + Delta-G solvation = -110.717792 kcal Electronic energy + Delta-G solvation = -26185.900151 eV Core-core repulsion = 22391.542253 eV Total energy + Delta-G solvation = -3794.357898 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.97078 -40.60007 -39.36174 -38.41873 -37.42016 -37.08369 -35.37538 -32.96321 -31.96950 -31.21498 -29.85983 -28.29556 -27.22158 -24.10507 -23.86226 -23.79144 -22.60832 -21.13786 -20.64342 -18.92446 -18.57180 -18.41042 -18.25531 -17.89823 -17.18445 -16.73882 -16.56504 -16.10768 -15.85116 -15.62656 -15.48820 -15.20932 -14.90612 -14.85088 -14.30559 -14.15610 -14.02349 -13.98161 -13.71609 -13.46321 -13.32939 -12.98660 -12.92324 -12.67949 -12.45722 -12.40126 -12.23626 -12.13765 -11.78705 -11.63077 -11.33551 -10.88374 -10.77271 -10.48243 -10.01875 -9.87889 -9.68497 -5.08445 -0.39875 0.07071 1.13119 1.51513 1.69544 1.80934 1.83445 2.44241 3.10127 3.15587 3.18523 3.32235 3.52816 3.59856 3.64524 3.68430 3.86963 3.95932 3.97279 4.01488 4.10931 4.17059 4.19405 4.22516 4.25564 4.32266 4.35353 4.50897 4.53488 4.58496 4.69089 4.78684 4.88065 4.91463 4.93526 4.99686 5.04941 5.07083 5.18116 5.18704 5.27615 5.45293 5.50749 6.25079 6.48065 6.65841 6.67184 7.11865 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.607 5.607 3 C 0.566 3.434 4 O -0.524 6.524 5 C -0.164 4.164 6 C 0.173 3.827 7 O -0.483 6.483 8 C -0.126 4.126 9 C -0.031 4.031 10 C -0.079 4.079 11 O -0.544 6.544 12 Si 0.687 3.313 13 C -0.145 4.145 14 C -0.078 4.078 15 C 0.139 3.861 16 H 0.106 0.894 17 C -0.125 4.125 18 C -0.149 4.149 19 C 0.104 3.896 20 H 0.055 0.945 21 O -0.567 6.567 22 C -0.111 4.111 23 C -0.124 4.124 24 H 0.063 0.937 25 H 0.074 0.926 26 H 0.087 0.913 27 H 0.403 0.597 28 H 0.142 0.858 29 H 0.079 0.921 30 H 0.385 0.615 31 H -0.248 1.248 32 H -0.253 1.253 33 H 0.127 0.873 34 H 0.151 0.849 35 H 0.072 0.928 36 H 0.068 0.932 37 H 0.070 0.930 38 H 0.075 0.925 39 H 0.379 0.621 40 H 0.075 0.925 41 H 0.074 0.926 42 H 0.068 0.932 43 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.847 2.279 0.167 7.218 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.340 5.340 3 C 0.356 3.644 4 O -0.400 6.400 5 C -0.167 4.167 6 C 0.127 3.873 7 O -0.295 6.295 8 C -0.144 4.144 9 C -0.032 4.032 10 C -0.189 4.189 11 O -0.350 6.350 12 Si 0.588 3.412 13 C -0.162 4.162 14 C -0.096 4.096 15 C 0.036 3.964 16 H 0.124 0.876 17 C -0.164 4.164 18 C -0.188 4.188 19 C 0.045 3.955 20 H 0.073 0.927 21 O -0.373 6.373 22 C -0.149 4.149 23 C -0.162 4.162 24 H 0.082 0.918 25 H 0.093 0.907 26 H 0.106 0.894 27 H 0.262 0.738 28 H 0.159 0.841 29 H 0.097 0.903 30 H 0.233 0.767 31 H -0.173 1.173 32 H -0.177 1.177 33 H 0.145 0.855 34 H 0.168 0.832 35 H 0.090 0.910 36 H 0.087 0.913 37 H 0.089 0.911 38 H 0.094 0.906 39 H 0.227 0.773 40 H 0.094 0.906 41 H 0.093 0.907 42 H 0.087 0.913 43 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -6.413 1.297 -0.221 6.546 hybrid contribution 0.350 -0.267 0.500 0.666 sum -6.062 1.030 0.278 6.155 Atomic orbital electron populations 1.22420 0.79949 1.04203 1.01857 1.47719 1.06890 1.05608 1.73763 1.18065 0.87038 0.83147 0.76198 1.90780 1.13286 1.86938 1.49006 1.20327 0.97129 0.94388 1.04893 1.18438 0.87444 0.90547 0.90911 1.84677 1.13570 1.93737 1.37522 1.21297 0.95004 0.97576 1.00568 1.19428 0.94276 0.93486 0.95975 1.24784 1.05178 0.89943 0.98995 1.86488 1.51149 1.27035 1.70370 0.95095 0.77262 0.88404 0.80460 1.20856 1.00514 0.92783 1.02088 1.21778 0.92694 0.98667 0.96454 1.21189 0.98557 0.81944 0.94706 0.87603 1.21817 1.00675 0.95794 0.98084 1.22239 1.01811 0.96184 0.98533 1.21836 0.94861 0.83951 0.94854 0.92656 1.86531 1.70334 1.30834 1.49607 1.21420 1.01514 0.94553 0.97385 1.21832 1.00823 0.95557 0.98025 0.91835 0.90712 0.89442 0.73792 0.84053 0.90295 0.76686 1.17310 1.17724 0.85540 0.83159 0.90973 0.91336 0.91109 0.90597 0.77331 0.90597 0.90724 0.91281 0.90739 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.12 7.81 59.85 0.47 0.35 16 2 N -0.61 -0.66 2.76 -175.17 -0.48 -1.14 16 3 C 0.57 2.23 7.40 -12.47 -0.09 2.14 16 4 O -0.52 -3.67 14.96 -14.57 -0.22 -3.88 16 5 C -0.16 -0.46 5.47 -104.84 -0.57 -1.03 16 6 C 0.17 0.56 6.69 -38.69 -0.26 0.30 16 7 O -0.48 -1.76 11.92 -38.52 -0.46 -2.21 16 8 C -0.13 -0.27 9.60 -39.47 -0.38 -0.64 16 9 C -0.03 -0.04 5.39 -104.58 -0.56 -0.61 16 10 C -0.08 0.08 2.78 36.00 0.10 0.18 16 11 O -0.54 0.37 12.81 -35.23 -0.45 -0.08 16 12 Si 0.69 -1.56 29.83 -169.99 -5.07 -6.63 16 13 C -0.14 -0.14 8.64 -39.63 -0.34 -0.49 16 14 C -0.08 -0.05 7.48 -39.19 -0.29 -0.35 16 15 C 0.14 0.11 2.52 -67.93 -0.17 -0.07 16 16 H 0.11 0.33 6.90 -51.93 -0.36 -0.02 16 17 C -0.13 0.06 5.17 -26.73 -0.14 -0.08 16 18 C -0.15 0.10 5.54 -26.73 -0.15 -0.05 16 19 C 0.10 -0.02 3.47 -26.73 -0.09 -0.12 16 20 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 21 O -0.57 -0.59 13.32 -35.23 -0.47 -1.06 16 22 C -0.11 -0.02 5.57 -26.75 -0.15 -0.17 16 23 C -0.12 0.07 5.20 -26.75 -0.14 -0.07 16 24 H 0.06 -0.22 7.21 -51.93 -0.37 -0.60 16 25 H 0.07 -0.23 6.46 -51.93 -0.34 -0.57 16 26 H 0.09 -0.17 5.05 -51.93 -0.26 -0.43 16 27 H 0.40 0.18 9.05 45.56 0.41 0.60 16 28 H 0.14 0.16 8.06 -52.49 -0.42 -0.26 16 29 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 30 H 0.39 -2.20 8.74 45.56 0.40 -1.80 16 31 H -0.25 -0.17 7.04 56.52 0.40 0.22 16 32 H -0.25 0.02 7.11 56.52 0.40 0.43 16 33 H 0.13 -0.01 4.83 -52.48 -0.25 -0.26 16 34 H 0.15 -0.27 4.63 -52.49 -0.24 -0.51 16 35 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 36 H 0.07 -0.11 6.70 -51.92 -0.35 -0.46 16 37 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.08 0.04 8.14 -51.92 -0.42 -0.38 16 39 H 0.38 -1.09 9.08 45.56 0.41 -0.68 16 40 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 41 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 42 H 0.07 -0.12 7.67 -51.93 -0.40 -0.51 16 43 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 337.85 15.07 5.09 5.09 Total: 0.00 -9.85 337.85 -9.18 -19.03 By element: Atomic # 1 Polarization: -4.06 SS G_CDS: -4.35 Total: -8.41 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -2.77 Total: -0.70 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -0.48 Total: -1.14 kcal Atomic # 8 Polarization: -5.64 SS G_CDS: -1.60 Total: -7.24 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.07 Total: -6.63 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -9.85 -9.18 -19.03 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9156390_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.692 kcal (2) G-P(sol) polarization free energy of solvation -9.845 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.537 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.026 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.718 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds