Wall clock time and date at job start Mon Mar 8 2021 06:52:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34772 * 119.99829 * 2 1 4 4 O 1.21286 * 119.99960 * 179.97438 * 3 2 1 5 5 C 1.50697 * 120.00265 * 0.02562 * 3 2 1 6 6 C 1.50696 * 109.47484 * 179.97438 * 5 3 2 7 7 C 1.34854 * 125.89121 * 275.32341 * 6 5 3 8 8 C 1.40890 * 107.41722 * 180.15763 * 7 6 5 9 9 C 1.34856 * 107.41764 * 359.55980 * 8 7 6 10 10 C 1.50694 * 125.88896 * 180.23979 * 9 8 7 11 11 O 1.42894 * 109.47447 * 245.02958 * 10 9 8 12 12 Si 1.86295 * 109.47514 * 5.03617 * 10 9 8 13 13 N 1.36337 * 108.21648 * 0.27154 * 9 8 7 14 14 C 1.46505 * 119.99998 * 180.02562 * 2 1 3 15 15 H 1.08999 * 109.46731 * 180.02562 * 14 2 1 16 16 C 1.52995 * 109.46675 * 299.99577 * 14 2 1 17 17 C 1.53004 * 109.46946 * 180.02562 * 16 14 2 18 18 C 1.53008 * 109.47045 * 300.00102 * 17 16 14 19 19 H 1.08999 * 109.46775 * 300.00324 * 18 17 16 20 20 O 1.42890 * 109.47091 * 179.97438 * 18 17 16 21 21 C 1.52995 * 109.46871 * 59.99858 * 18 17 16 22 22 C 1.52997 * 109.47221 * 59.99826 * 14 2 1 23 23 H 1.09001 * 109.47093 * 89.99706 * 1 2 3 24 24 H 1.09002 * 109.46989 * 209.99208 * 1 2 3 25 25 H 1.08988 * 109.47360 * 329.99756 * 1 2 3 26 26 H 1.09001 * 109.47211 * 59.98915 * 5 3 2 27 27 H 1.09004 * 109.46963 * 299.99521 * 5 3 2 28 28 H 1.07999 * 126.28920 * 0.02562 * 7 6 5 29 29 H 1.08002 * 126.29400 * 179.83402 * 8 7 6 30 30 H 1.09010 * 109.46677 * 125.03364 * 10 9 8 31 31 H 0.96701 * 114.00262 * 60.00209 * 11 10 9 32 32 H 1.48499 * 110.00169 * 58.67453 * 12 10 9 33 33 H 1.48505 * 110.00375 * 179.97438 * 12 10 9 34 34 H 0.97000 * 125.63784 * 180.02562 * 13 9 8 35 35 H 1.09004 * 109.47591 * 300.00194 * 16 14 2 36 36 H 1.08999 * 109.47053 * 60.00794 * 16 14 2 37 37 H 1.08998 * 109.47337 * 180.02562 * 17 16 14 38 38 H 1.08993 * 109.47195 * 59.99973 * 17 16 14 39 39 H 0.96708 * 114.00388 * 60.00488 * 20 18 17 40 40 H 1.09004 * 109.47130 * 180.02562 * 21 18 17 41 41 H 1.08997 * 109.47680 * 60.00248 * 21 18 17 42 42 H 1.08993 * 109.47161 * 299.99910 * 22 14 2 43 43 H 1.08999 * 109.47312 * 60.00055 * 22 14 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1388 1.1672 0.0000 4 8 3.3517 1.1672 0.0005 5 6 1.3854 2.4723 0.0006 6 6 2.3646 3.6177 0.0011 7 6 2.9554 4.1523 1.0891 8 6 3.7894 5.1975 0.6454 9 6 3.6840 5.2555 -0.6978 10 6 4.4063 6.2230 -1.5996 11 8 3.4574 7.0849 -2.2309 12 14 5.5962 7.2419 -0.5914 13 7 2.8109 4.2884 -1.0990 14 6 2.1975 -1.2688 -0.0006 15 1 3.2692 -1.0695 0.0000 16 6 1.8279 -2.0715 1.2484 17 6 2.5934 -3.3963 1.2482 18 6 2.2243 -4.1984 -0.0015 19 1 1.1527 -4.3978 -0.0017 20 8 2.9396 -5.4353 -0.0020 21 6 2.5939 -3.3955 -1.2503 22 6 1.8279 -2.0705 -1.2501 23 1 -0.3633 0.0001 -1.0277 24 1 -0.3633 -0.8901 0.5137 25 1 -0.3633 0.8898 0.5138 26 1 0.7589 2.5298 0.8907 27 1 0.7584 2.5302 -0.8892 28 1 2.8134 3.8384 2.1127 29 1 4.4039 5.8325 1.2664 30 1 4.9564 5.6690 -2.3604 31 1 2.9307 7.6099 -1.6128 32 1 6.5688 6.3548 0.0958 33 1 6.3153 8.1997 -1.4694 34 1 2.5505 4.1069 -2.0156 35 1 2.0913 -1.5003 2.1386 36 1 0.7563 -2.2707 1.2482 37 1 2.3298 -3.9684 2.1377 38 1 3.6649 -3.1967 1.2484 39 1 2.7541 -5.9973 0.7629 40 1 2.3305 -3.9667 -2.1406 41 1 3.6654 -3.1960 -1.2501 42 1 0.7563 -2.2697 -1.2502 43 1 2.0912 -1.4986 -2.1399 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9156390_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:52:04 Heat of formation + Delta-G solvation = -74.509451 kcal Electronic energy + Delta-G solvation = -24211.666610 eV Core-core repulsion = 20644.823625 eV Total energy + Delta-G solvation = -3566.842984 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.30532 -41.21887 -39.57164 -37.68581 -37.24107 -35.29574 -33.10453 -31.98147 -31.84533 -30.26949 -28.96996 -27.82995 -25.22973 -23.93722 -23.33469 -21.42615 -21.23988 -20.85905 -20.21438 -18.82850 -18.28795 -18.15546 -17.58085 -16.83327 -16.68608 -16.19935 -16.07319 -15.62849 -15.32758 -14.91932 -14.82906 -14.51197 -14.37661 -14.31901 -14.06228 -13.96597 -13.77165 -13.68248 -13.54321 -13.36642 -13.19914 -12.85930 -12.79869 -12.41008 -12.26966 -11.99450 -11.88371 -11.71917 -11.34926 -10.88584 -10.78640 -10.58497 -9.72979 -9.69702 -8.88259 -4.94586 1.16876 1.29681 1.59907 1.74992 1.82120 2.01336 2.16976 2.50368 3.14233 3.42193 3.48293 3.58353 3.61868 3.77780 3.85370 3.88383 3.96480 4.00990 4.01277 4.10057 4.21052 4.23793 4.30166 4.34480 4.39699 4.44812 4.51783 4.58087 4.60906 4.77348 4.84019 4.88581 4.92045 4.98561 5.03442 5.16803 5.26165 5.33180 5.36880 5.45439 6.07311 6.20864 6.27531 6.55032 6.64529 6.67391 7.15071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.071 3.929 2 N -0.615 5.615 3 C 0.512 3.488 4 O -0.523 6.523 5 C -0.070 4.070 6 C 0.035 3.965 7 C -0.173 4.173 8 C -0.187 4.187 9 C -0.010 4.010 10 C -0.050 4.050 11 O -0.547 6.547 12 Si 0.720 3.280 13 N -0.535 5.535 14 C 0.137 3.863 15 H 0.103 0.897 16 C -0.124 4.124 17 C -0.150 4.150 18 C 0.104 3.896 19 H 0.056 0.944 20 O -0.568 6.568 21 C -0.111 4.111 22 C -0.123 4.123 23 H 0.059 0.941 24 H 0.076 0.924 25 H 0.075 0.925 26 H 0.117 0.883 27 H 0.099 0.901 28 H 0.136 0.864 29 H 0.142 0.858 30 H 0.109 0.891 31 H 0.381 0.619 32 H -0.255 1.255 33 H -0.256 1.256 34 H 0.412 0.588 35 H 0.071 0.929 36 H 0.068 0.932 37 H 0.070 0.930 38 H 0.075 0.925 39 H 0.379 0.621 40 H 0.075 0.925 41 H 0.073 0.927 42 H 0.068 0.932 43 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.891 -0.027 2.587 7.360 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 N -0.349 5.349 3 C 0.300 3.700 4 O -0.397 6.397 5 C -0.110 4.110 6 C -0.078 4.078 7 C -0.198 4.198 8 C -0.212 4.212 9 C -0.123 4.123 10 C -0.160 4.160 11 O -0.352 6.352 12 Si 0.620 3.380 13 N -0.130 5.130 14 C 0.034 3.966 15 H 0.122 0.878 16 C -0.163 4.163 17 C -0.188 4.188 18 C 0.045 3.955 19 H 0.074 0.926 20 O -0.373 6.373 21 C -0.150 4.150 22 C -0.161 4.161 23 H 0.077 0.923 24 H 0.094 0.906 25 H 0.094 0.906 26 H 0.135 0.865 27 H 0.117 0.883 28 H 0.154 0.846 29 H 0.159 0.841 30 H 0.127 0.873 31 H 0.229 0.771 32 H -0.179 1.179 33 H -0.181 1.181 34 H 0.248 0.752 35 H 0.090 0.910 36 H 0.087 0.913 37 H 0.089 0.911 38 H 0.093 0.907 39 H 0.227 0.773 40 H 0.093 0.907 41 H 0.092 0.908 42 H 0.087 0.913 43 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -4.946 0.172 1.464 5.161 hybrid contribution -0.733 -1.036 -0.210 1.286 sum -5.680 -0.864 1.254 5.880 Atomic orbital electron populations 1.21864 0.79439 1.03692 1.02201 1.47920 1.07022 1.05683 1.74260 1.20645 0.88203 0.85055 0.76119 1.90761 1.13783 1.86965 1.48240 1.20167 0.96469 0.88816 1.05555 1.19505 1.03312 0.98084 0.86935 1.20580 1.01668 0.99755 0.97755 1.20644 1.05063 1.02754 0.92709 1.20824 1.00064 0.96601 0.94852 1.24836 0.97351 0.93503 1.00335 1.86479 1.54093 1.57571 1.37053 0.94162 0.79008 0.82154 0.82668 1.41793 1.35564 1.27156 1.08493 1.21160 0.98558 0.82301 0.94568 0.87850 1.21816 1.00638 0.95765 0.98071 1.22244 1.01794 0.96271 0.98521 1.21832 0.94850 0.83956 0.94844 0.92641 1.86531 1.70287 1.30853 1.49660 1.21440 1.01478 0.94642 0.97391 1.21828 1.00741 0.95500 0.98052 0.92282 0.90557 0.90643 0.86512 0.88276 0.84621 0.84057 0.87332 0.77129 1.17923 1.18105 0.75164 0.91020 0.91321 0.91112 0.90668 0.77323 0.90664 0.90808 0.91285 0.90934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.29 9.30 59.85 0.56 0.27 16 2 N -0.61 0.47 2.76 -173.94 -0.48 -0.01 16 3 C 0.51 0.81 7.67 -10.99 -0.08 0.72 16 4 O -0.52 -3.27 15.36 5.55 0.09 -3.19 16 5 C -0.07 0.08 4.79 -29.04 -0.14 -0.05 16 6 C 0.04 0.06 5.66 -81.79 -0.46 -0.41 16 7 C -0.17 -0.43 10.77 -39.78 -0.43 -0.86 16 8 C -0.19 -0.39 9.37 -39.78 -0.37 -0.77 16 9 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 10 C -0.05 -0.04 3.08 36.00 0.11 0.07 16 11 O -0.55 -0.35 12.88 -35.23 -0.45 -0.81 16 12 Si 0.72 -0.15 30.60 -169.99 -5.20 -5.35 16 13 N -0.54 -0.84 6.07 -5.44 -0.03 -0.87 16 14 C 0.14 -0.01 2.52 -67.93 -0.17 -0.18 16 15 H 0.10 0.28 6.90 -51.93 -0.36 -0.07 16 16 C -0.12 0.17 5.18 -26.73 -0.14 0.04 16 17 C -0.15 0.17 5.55 -26.72 -0.15 0.03 16 18 C 0.10 -0.06 3.47 -26.73 -0.09 -0.15 16 19 H 0.06 -0.08 8.14 -51.93 -0.42 -0.51 16 20 O -0.57 -0.48 13.32 -35.23 -0.47 -0.95 16 21 C -0.11 0.00 5.57 -26.71 -0.15 -0.15 16 22 C -0.12 0.12 5.21 -26.71 -0.14 -0.02 16 23 H 0.06 -0.27 8.14 -51.93 -0.42 -0.70 16 24 H 0.08 -0.36 6.43 -51.93 -0.33 -0.70 16 25 H 0.07 -0.42 6.44 -51.94 -0.33 -0.75 16 26 H 0.12 -0.40 7.40 -51.93 -0.38 -0.79 16 27 H 0.10 -0.33 8.11 -51.93 -0.42 -0.75 16 28 H 0.14 0.18 8.06 -52.49 -0.42 -0.24 16 29 H 0.14 0.02 6.24 -52.49 -0.33 -0.30 16 30 H 0.11 0.16 7.96 -51.92 -0.41 -0.25 16 31 H 0.38 -1.18 8.70 45.56 0.40 -0.79 16 32 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 33 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 34 H 0.41 0.00 8.96 -40.82 -0.37 -0.37 16 35 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.07 -0.18 6.66 -51.93 -0.35 -0.53 16 37 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 38 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 39 H 0.38 -1.19 9.08 45.56 0.41 -0.77 16 40 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 41 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 42 H 0.07 -0.15 7.67 -51.93 -0.40 -0.55 16 43 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 343.59 15.07 5.18 5.18 Total: 0.00 -9.82 343.59 -9.44 -19.26 By element: Atomic # 1 Polarization: -5.36 SS G_CDS: -5.87 Total: -11.23 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: -2.19 Total: -2.02 kcal Atomic # 7 Polarization: -0.37 SS G_CDS: -0.51 Total: -0.88 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -0.84 Total: -4.94 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.20 Total: -5.35 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -9.82 -9.44 -19.26 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9156390_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.252 kcal (2) G-P(sol) polarization free energy of solvation -9.817 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.257 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds