Wall clock time and date at job start Mon Mar 8 2021 04:58:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86299 * 109.46993 * 2 1 4 4 C 1.50703 * 109.46943 * 119.99944 * 2 1 3 5 5 C 1.35453 * 126.06602 * 245.04135 * 4 2 1 6 6 N 1.35530 * 108.86942 * 179.69994 * 5 4 2 7 7 C 1.37653 * 108.64569 * 0.43374 * 6 5 4 8 8 C 1.46678 * 126.23348 * 179.83249 * 7 6 5 9 9 O 1.21697 * 119.99635 * 179.69278 * 8 7 6 10 10 N 1.34769 * 120.00078 * 359.68773 * 8 7 6 11 11 C 1.46501 * 120.00014 * 179.97438 * 10 8 7 12 12 H 1.09004 * 112.85074 * 336.20143 * 11 10 8 13 13 C 1.53782 * 113.61142 * 107.50467 * 11 10 8 14 14 C 1.53962 * 87.11063 * 89.18830 * 13 11 10 15 15 H 1.08993 * 113.61598 * 270.84305 * 14 13 11 16 16 C 1.50700 * 113.66521 * 139.88647 * 14 13 11 17 17 C 1.38244 * 119.98792 * 322.27921 * 16 14 13 18 18 C 1.38223 * 120.00865 * 179.76736 * 17 16 14 19 19 C 1.38348 * 119.98753 * 0.52739 * 18 17 16 20 20 Cl 1.73600 * 120.01224 * 179.70278 * 19 18 17 21 21 C 1.38353 * 119.97421 * 359.72258 * 19 18 17 22 22 C 1.38212 * 119.98828 * 0.02562 * 21 19 18 23 23 C 1.53781 * 113.61619 * 205.00312 * 11 10 8 24 24 C 1.37869 * 107.53290 * 359.57167 * 7 6 5 25 25 H 0.96696 * 113.99948 * 59.99780 * 1 2 3 26 26 H 1.09000 * 109.46690 * 239.99753 * 2 1 3 27 27 H 1.48504 * 109.99965 * 298.67983 * 3 2 1 28 28 H 1.48501 * 109.99924 * 60.00167 * 3 2 1 29 29 H 1.08001 * 125.56413 * 359.97438 * 5 4 2 30 30 H 0.96997 * 125.68134 * 180.30700 * 6 5 4 31 31 H 0.97001 * 120.00013 * 0.02562 * 10 8 7 32 32 H 1.08997 * 113.61668 * 203.66381 * 13 11 10 33 33 H 1.08994 * 113.61387 * 334.57115 * 13 11 10 34 34 H 1.07998 * 119.99390 * 0.02562 * 17 16 14 35 35 H 1.08003 * 120.00101 * 180.25367 * 18 17 16 36 36 H 1.08003 * 120.00873 * 180.02562 * 21 19 18 37 37 H 1.07998 * 119.99427 * 179.97438 * 22 21 19 38 38 H 1.09002 * 113.61445 * 25.43587 * 23 11 10 39 39 H 1.09002 * 113.61408 * 156.25317 * 23 11 10 40 40 H 1.07998 * 126.45866 * 180.30024 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6327 -0.1497 2.2446 6 7 2.8991 -1.1013 3.1721 7 6 2.3680 -2.2961 2.7418 8 6 2.4359 -3.5796 3.4484 9 8 1.9193 -4.5692 2.9637 10 7 3.0704 -3.6632 4.6345 11 6 3.1377 -4.9450 5.3405 12 1 2.3355 -5.6267 5.0578 13 6 4.5338 -5.5896 5.3153 14 6 4.8339 -4.8048 6.6054 15 1 5.2483 -3.8127 6.4266 16 6 5.6164 -5.5925 7.6244 17 6 5.3631 -6.9403 7.7989 18 6 6.0839 -7.6643 8.7300 19 6 7.0513 -7.0375 9.4949 20 17 7.9516 -7.9445 10.6699 21 6 7.3007 -5.6875 9.3235 22 6 6.5830 -4.9657 8.3885 23 6 3.3174 -4.8021 6.8611 24 6 1.7554 -2.0653 1.5284 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5139 -0.8900 27 1 1.5879 2.4585 -1.2243 28 1 1.5615 2.4678 1.2085 29 1 2.9274 0.8875 2.3063 30 1 3.3849 -0.9639 4.0003 31 1 3.4819 -2.8744 5.0210 32 1 4.5184 -6.6702 5.4568 33 1 5.1415 -5.2816 4.4645 34 1 4.6049 -7.4285 7.2047 35 1 5.8887 -8.7182 8.8633 36 1 8.0561 -5.1977 9.9201 37 1 6.7774 -3.9118 8.2549 38 1 2.9433 -3.8585 7.2582 39 1 2.9682 -5.6669 7.4252 40 1 1.2368 -2.7935 0.9225 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:58:33 Heat of formation + Delta-G solvation = 27.709646 kcal Electronic energy + Delta-G solvation = -24541.452941 eV Core-core repulsion = 20736.095585 eV Total energy + Delta-G solvation = -3805.357356 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.092 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.49591 -41.43954 -40.16290 -38.84581 -37.76025 -37.35971 -34.74101 -32.69527 -32.07851 -31.62132 -30.58676 -26.86209 -26.71497 -25.96340 -24.34180 -23.73623 -22.52484 -21.31186 -20.68712 -20.30746 -19.57192 -18.45017 -18.32645 -17.34844 -16.94555 -16.56682 -16.41737 -16.25645 -15.83087 -15.36817 -15.14247 -15.06070 -14.86595 -14.60388 -14.55269 -14.43430 -14.30714 -13.98174 -13.63293 -13.49702 -13.34377 -13.25767 -12.61685 -12.55291 -12.45584 -12.03590 -11.94473 -11.76376 -11.62136 -11.33146 -11.24471 -10.38849 -10.26461 -10.01258 -9.92814 -9.50411 -9.28675 -4.84297 0.11643 0.31786 0.35253 1.16440 1.37256 1.54027 1.69761 1.90040 2.05693 2.12927 2.23820 2.58583 3.42759 3.55999 3.65040 3.66975 3.81092 3.84827 3.94461 3.95763 4.09005 4.15639 4.19476 4.26913 4.35775 4.42769 4.59619 4.66912 4.72388 4.77136 4.80758 4.88153 4.91324 5.00356 5.01925 5.04755 5.11140 5.25205 5.27458 5.45231 5.58769 5.63673 5.73383 5.83981 6.34510 6.52802 6.69512 7.05271 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.064 4.064 3 Si 0.786 3.214 4 C -0.191 4.191 5 C 0.059 3.941 6 N -0.513 5.513 7 C -0.069 4.069 8 C 0.592 3.408 9 O -0.574 6.574 10 N -0.696 5.696 11 C 0.113 3.887 12 H 0.085 0.915 13 C -0.143 4.143 14 C -0.063 4.063 15 H 0.119 0.881 16 C -0.068 4.068 17 C -0.109 4.109 18 C -0.119 4.119 19 C -0.056 4.056 20 Cl -0.084 7.084 21 C -0.119 4.119 22 C -0.104 4.104 23 C -0.124 4.124 24 C -0.105 4.105 25 H 0.390 0.610 26 H 0.078 0.922 27 H -0.297 1.297 28 H -0.285 1.285 29 H 0.212 0.788 30 H 0.438 0.562 31 H 0.413 0.587 32 H 0.098 0.902 33 H 0.070 0.930 34 H 0.145 0.855 35 H 0.137 0.863 36 H 0.141 0.859 37 H 0.154 0.846 38 H 0.090 0.910 39 H 0.101 0.899 40 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.683 6.646 1.247 8.225 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.172 4.172 3 Si 0.690 3.310 4 C -0.197 4.197 5 C -0.079 4.079 6 N -0.111 5.111 7 C -0.182 4.182 8 C 0.381 3.619 9 O -0.454 6.454 10 N -0.347 5.347 11 C 0.008 3.992 12 H 0.104 0.896 13 C -0.181 4.181 14 C -0.081 4.081 15 H 0.137 0.863 16 C -0.068 4.068 17 C -0.127 4.127 18 C -0.138 4.138 19 C -0.082 4.082 20 Cl -0.055 7.055 21 C -0.137 4.137 22 C -0.122 4.122 23 C -0.162 4.162 24 C -0.132 4.132 25 H 0.240 0.760 26 H 0.096 0.904 27 H -0.224 1.224 28 H -0.211 1.211 29 H 0.228 0.772 30 H 0.280 0.720 31 H 0.250 0.750 32 H 0.116 0.884 33 H 0.088 0.912 34 H 0.163 0.837 35 H 0.155 0.845 36 H 0.158 0.842 37 H 0.172 0.828 38 H 0.109 0.891 39 H 0.120 0.880 40 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 4.375 6.315 1.765 7.883 hybrid contribution -0.870 -0.392 -0.032 0.955 sum 3.505 5.924 1.734 7.098 Atomic orbital electron populations 1.86574 1.19566 1.80692 1.50643 1.24542 0.83138 1.12270 0.97256 0.94290 0.89390 0.70573 0.76761 1.18967 1.07705 0.93751 0.99251 1.22282 1.01143 0.95719 0.88773 1.41793 1.43346 1.06330 1.19643 1.20087 1.12018 0.86720 0.99327 1.17194 0.77519 0.86366 0.80800 1.90850 1.48718 1.37934 1.67856 1.45343 1.56534 1.12517 1.20286 1.21899 0.98655 0.85425 0.93258 0.89632 1.23600 0.95959 1.00957 0.97589 1.21650 0.94323 0.99418 0.92716 0.86282 1.19971 0.96192 0.93888 0.96793 1.21209 0.99720 0.94068 0.97674 1.21249 0.95355 1.01204 0.96004 1.21180 0.97865 0.93436 0.95728 1.98383 1.74428 1.74959 1.57737 1.21294 1.00906 0.91977 0.99551 1.21315 0.95016 1.01167 0.94710 1.23388 0.94516 1.04668 0.93637 1.21243 1.00179 0.96600 0.95227 0.75985 0.90418 1.22421 1.21144 0.77155 0.71993 0.75046 0.88403 0.91153 0.83697 0.84473 0.84154 0.82811 0.89145 0.88049 0.85687 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -2.61 12.86 -148.98 -1.92 -4.52 16 2 C -0.06 -0.02 3.01 71.24 0.21 0.19 16 3 Si 0.79 -3.62 30.60 68.60 2.10 -1.53 16 4 C -0.19 -0.43 5.46 -20.12 -0.11 -0.54 16 5 C 0.06 -0.28 10.45 83.48 0.87 0.59 16 6 N -0.51 3.14 5.99 -183.62 -1.10 2.04 16 7 C -0.07 -0.20 7.06 40.35 0.28 0.08 16 8 C 0.59 3.14 7.79 86.45 0.67 3.81 16 9 O -0.57 -8.74 16.48 -4.34 -0.07 -8.81 16 10 N -0.70 2.50 5.26 -444.00 -2.34 0.17 16 11 C 0.11 -0.34 4.32 45.52 0.20 -0.15 16 12 H 0.09 0.20 7.46 -2.38 -0.02 0.18 16 13 C -0.14 0.66 7.26 31.18 0.23 0.89 16 14 C -0.06 0.51 3.87 -10.95 -0.04 0.46 16 15 H 0.12 -1.42 8.09 -2.39 -0.02 -1.43 16 16 C -0.07 0.30 5.29 -19.86 -0.11 0.19 16 17 C -0.11 0.29 8.60 22.27 0.19 0.49 16 18 C -0.12 -0.02 9.83 22.29 0.22 0.20 16 19 C -0.06 -0.10 6.32 22.32 0.14 0.04 16 20 Cl -0.08 -0.30 28.96 -2.72 -0.08 -0.38 16 21 C -0.12 0.10 9.83 22.29 0.22 0.32 16 22 C -0.10 0.43 9.71 22.27 0.22 0.65 16 23 C -0.12 0.95 7.28 31.12 0.23 1.18 16 24 C -0.11 -0.77 10.59 22.57 0.24 -0.53 16 25 H 0.39 -1.38 8.74 -74.06 -0.65 -2.03 16 26 H 0.08 -0.12 7.96 -2.39 -0.02 -0.14 16 27 H -0.30 -0.32 7.11 99.48 0.71 0.38 16 28 H -0.28 -0.09 7.11 99.48 0.71 0.61 16 29 H 0.21 -2.58 6.21 -2.91 -0.02 -2.60 16 30 H 0.44 -6.43 8.19 -92.71 -0.76 -7.19 16 31 H 0.41 -4.62 7.83 -92.71 -0.73 -5.35 16 32 H 0.10 -0.45 6.32 -2.39 -0.02 -0.47 16 33 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 34 H 0.15 -0.83 6.67 -2.91 -0.02 -0.85 16 35 H 0.14 -0.20 8.06 -2.91 -0.02 -0.23 16 36 H 0.14 -0.43 8.06 -2.91 -0.02 -0.45 16 37 H 0.15 -1.43 8.06 -2.91 -0.02 -1.46 16 38 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 39 H 0.10 -0.73 7.71 -2.39 -0.02 -0.74 16 40 H 0.13 1.39 8.06 -2.91 -0.02 1.36 16 Total: 0.00 -25.94 354.75 -0.72 -26.65 By element: Atomic # 1 Polarization: -20.52 SS G_CDS: -0.98 Total: -21.50 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: 3.66 Total: 7.88 kcal Atomic # 7 Polarization: 5.64 SS G_CDS: -3.44 Total: 2.20 kcal Atomic # 8 Polarization: -11.35 SS G_CDS: -1.99 Total: -13.34 kcal Atomic # 14 Polarization: -3.62 SS G_CDS: 2.10 Total: -1.53 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -0.08 Total: -0.38 kcal Total: -25.94 -0.72 -26.65 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.364 kcal (2) G-P(sol) polarization free energy of solvation -25.937 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.427 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.717 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.654 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds