Wall clock time and date at job start Mon Mar 8 2021 04:58:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37645 * 125.67804 * 2 1 4 4 C 1.46678 * 126.23479 * 359.96793 * 3 2 1 5 5 O 1.21691 * 119.99697 * 4.36131 * 4 3 2 6 6 N 1.34777 * 120.00022 * 184.35808 * 4 3 2 7 7 C 1.46498 * 119.99790 * 174.62651 * 6 4 3 8 8 H 1.08999 * 112.85474 * 23.80930 * 7 6 4 9 9 C 1.53781 * 113.61290 * 155.00332 * 7 6 4 10 10 C 1.53781 * 87.08116 * 89.20085 * 9 7 6 11 11 H 1.08998 * 113.61372 * 270.87973 * 10 9 7 12 12 C 1.50702 * 113.61519 * 140.06393 * 10 9 7 13 13 C 1.38236 * 119.99138 * 301.25421 * 12 10 9 14 14 C 1.38217 * 120.01863 * 179.76513 * 13 12 10 15 15 C 1.38346 * 119.98353 * 0.53314 * 14 13 12 16 16 Cl 1.73597 * 120.01464 * 179.70425 * 15 14 13 17 17 C 1.38357 * 119.97394 * 359.71866 * 15 14 13 18 18 C 1.38214 * 119.98778 * 0.02562 * 17 15 14 19 19 C 1.53777 * 87.08066 * 25.43308 * 10 9 7 20 20 C 1.37873 * 107.53172 * 179.69780 * 3 2 1 21 21 C 1.39833 * 107.08778 * 0.26866 * 20 3 2 22 22 C 1.35457 * 107.86245 * 359.97438 * 21 20 3 23 23 C 1.50697 * 125.56244 * 179.97438 * 22 21 20 24 24 O 1.42900 * 109.47045 * 210.02424 * 23 22 21 25 25 Si 1.86296 * 109.47157 * 330.02577 * 23 22 21 26 26 H 1.09004 * 109.47148 * 92.00647 * 1 2 3 27 27 H 1.08995 * 109.47431 * 212.00479 * 1 2 3 28 28 H 1.09003 * 109.47123 * 332.00920 * 1 2 3 29 29 H 0.96993 * 120.00014 * 354.63282 * 6 4 3 30 30 H 1.08998 * 113.61645 * 334.65102 * 9 7 6 31 31 H 1.08999 * 113.69197 * 203.75975 * 9 7 6 32 32 H 1.08008 * 119.98583 * 0.02562 * 13 12 10 33 33 H 1.08000 * 120.00573 * 180.25859 * 14 13 12 34 34 H 1.08002 * 120.00585 * 179.97438 * 17 15 14 35 35 H 1.07995 * 119.99731 * 180.02562 * 18 17 15 36 36 H 1.09003 * 113.61595 * 89.12175 * 19 10 9 37 37 H 1.09006 * 113.61048 * 220.01613 * 19 10 9 38 38 H 1.08000 * 126.45738 * 180.22510 * 20 3 2 39 39 H 1.07997 * 126.06847 * 179.97438 * 21 20 3 40 40 H 1.09001 * 109.47086 * 90.02606 * 23 22 21 41 41 H 0.96706 * 113.99912 * 179.97438 * 24 23 22 42 42 H 1.48510 * 109.99962 * 178.68018 * 25 23 22 43 43 H 1.48498 * 110.00370 * 299.99812 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8124 2.5124 -0.0007 5 8 0.6246 2.7645 0.0789 6 7 2.7096 3.5143 -0.0893 7 6 2.2503 4.9003 -0.2086 8 1 1.2457 5.0490 0.1874 9 6 3.2710 5.9332 0.2975 10 6 3.8461 5.9470 -1.1286 11 1 4.6247 5.2021 -1.2927 12 6 4.2403 7.3206 -1.6073 13 6 3.2975 8.3301 -1.6624 14 6 3.6595 9.5913 -2.0967 15 6 4.9632 9.8405 -2.4868 16 17 5.4169 11.4223 -3.0397 17 6 5.9053 8.8284 -2.4364 18 6 5.5433 7.5690 -1.9969 19 6 2.4553 5.5007 -1.6094 20 6 3.5780 0.6887 0.0069 21 6 3.5521 -0.7094 0.0049 22 6 2.2554 -1.1010 -0.0026 23 6 1.7709 -2.5279 -0.0077 24 8 0.5167 -2.6026 -0.6884 25 14 3.0164 -3.6036 -0.8807 26 1 -0.3634 -0.0360 -1.0271 27 1 -0.3634 -0.8714 0.5446 28 1 -0.3633 0.9075 0.4823 29 1 3.6592 3.3176 -0.0741 30 1 3.9607 5.5366 1.0426 31 1 2.8234 6.8808 0.5970 32 1 2.2787 8.1342 -1.3620 33 1 2.9237 10.3809 -2.1358 34 1 6.9231 9.0223 -2.7412 35 1 6.2786 6.7790 -1.9571 36 1 1.7834 6.3297 -1.8319 37 1 2.4865 4.7550 -2.4039 38 1 4.4583 1.3143 0.0122 39 1 4.4132 -1.3612 0.0085 40 1 1.6483 -2.8737 1.0188 41 1 0.1445 -3.4942 -0.7305 42 1 2.5654 -5.0185 -0.8647 43 1 3.1926 -3.1426 -2.2813 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:58:40 Heat of formation + Delta-G solvation = 33.597133 kcal Electronic energy + Delta-G solvation = -26879.562186 eV Core-core repulsion = 22918.922511 eV Total energy + Delta-G solvation = -3960.639675 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.56914 -41.44513 -40.14438 -38.82704 -37.84636 -37.34785 -34.87631 -33.64520 -32.08230 -31.89673 -31.04754 -27.50675 -27.20350 -26.69329 -25.73469 -23.92444 -23.27379 -22.51682 -21.54878 -20.40736 -20.01562 -18.84041 -18.46308 -18.23943 -17.30940 -16.97130 -16.69017 -16.49964 -16.27945 -16.06337 -15.56179 -15.42048 -15.20382 -14.68373 -14.59182 -14.48136 -14.40216 -14.31456 -13.93061 -13.65138 -13.60964 -13.46534 -13.33783 -13.23755 -12.98166 -12.72397 -12.59853 -12.43419 -12.09881 -11.99431 -11.74072 -11.59666 -11.23699 -11.15018 -10.76052 -10.17756 -9.99801 -9.73700 -9.48891 -9.04922 -4.87252 0.13043 0.33071 0.36776 1.17216 1.17785 1.58915 1.70371 1.76069 2.03808 2.31608 2.34155 2.60081 3.13514 3.45842 3.63088 3.67675 3.70919 3.78828 3.86397 3.95699 3.96210 3.98198 4.22207 4.28249 4.37355 4.39274 4.42062 4.44513 4.56406 4.61660 4.67323 4.74220 4.78348 4.85591 4.91691 5.02944 5.05981 5.10355 5.15168 5.19116 5.27022 5.28518 5.49970 5.65925 5.78796 5.85255 6.02026 6.14540 6.47125 6.51355 7.12483 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.081 3.919 2 N -0.408 5.408 3 C -0.090 4.090 4 C 0.589 3.411 5 O -0.589 6.589 6 N -0.686 5.686 7 C 0.116 3.884 8 H 0.086 0.914 9 C -0.123 4.123 10 C -0.064 4.064 11 H 0.118 0.882 12 C -0.068 4.068 13 C -0.109 4.109 14 C -0.119 4.119 15 C -0.056 4.056 16 Cl -0.084 7.084 17 C -0.118 4.118 18 C -0.105 4.105 19 C -0.144 4.144 20 C -0.121 4.121 21 C -0.206 4.206 22 C 0.043 3.957 23 C -0.070 4.070 24 O -0.562 6.562 25 Si 0.810 3.190 26 H 0.063 0.937 27 H 0.097 0.903 28 H 0.083 0.917 29 H 0.418 0.582 30 H 0.091 0.909 31 H 0.102 0.898 32 H 0.146 0.854 33 H 0.138 0.862 34 H 0.141 0.859 35 H 0.154 0.846 36 H 0.098 0.902 37 H 0.066 0.934 38 H 0.181 0.819 39 H 0.187 0.813 40 H 0.102 0.898 41 H 0.400 0.600 42 H -0.281 1.281 43 H -0.309 1.309 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.177 -4.663 2.987 7.580 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 N -0.081 5.081 3 C -0.203 4.203 4 C 0.379 3.621 5 O -0.471 6.471 6 N -0.337 5.337 7 C 0.010 3.990 8 H 0.104 0.896 9 C -0.161 4.161 10 C -0.082 4.082 11 H 0.136 0.864 12 C -0.068 4.068 13 C -0.127 4.127 14 C -0.138 4.138 15 C -0.082 4.082 16 Cl -0.055 7.055 17 C -0.137 4.137 18 C -0.123 4.123 19 C -0.182 4.182 20 C -0.147 4.147 21 C -0.229 4.229 22 C -0.075 4.075 23 C -0.178 4.178 24 O -0.373 6.373 25 Si 0.713 3.287 26 H 0.082 0.918 27 H 0.115 0.885 28 H 0.102 0.898 29 H 0.256 0.744 30 H 0.110 0.890 31 H 0.121 0.879 32 H 0.163 0.837 33 H 0.156 0.844 34 H 0.158 0.842 35 H 0.171 0.829 36 H 0.116 0.884 37 H 0.085 0.915 38 H 0.198 0.802 39 H 0.204 0.796 40 H 0.120 0.880 41 H 0.251 0.749 42 H -0.207 1.207 43 H -0.237 1.237 Dipole moment (debyes) X Y Z Total from point charges 4.208 -4.200 2.281 6.368 hybrid contribution -1.268 0.074 -0.486 1.360 sum 2.941 -4.126 1.794 5.375 Atomic orbital electron populations 1.22113 0.76118 1.04479 1.03268 1.43903 1.07155 1.04857 1.52213 1.20216 0.91652 0.87158 1.21255 1.17208 0.85302 0.84363 0.75230 1.90765 1.18110 1.85366 1.52847 1.45126 1.10020 1.04884 1.73667 1.21871 0.99441 0.80107 0.97542 0.89596 1.23380 0.97453 0.98986 0.96247 1.21621 0.97313 0.93177 0.96069 0.86404 1.19978 0.93409 0.95659 0.97741 1.21196 1.00679 0.91593 0.99190 1.21242 0.94545 0.98549 0.99447 1.21174 0.95818 0.87046 1.04186 1.98381 1.92874 1.25891 1.88350 1.21292 0.99735 0.92471 1.00200 1.21325 0.96570 0.96483 0.97879 1.23578 0.96966 1.00923 0.96740 1.21730 0.94266 0.95682 1.03043 1.20975 0.94998 0.95748 1.11190 1.20613 0.91341 0.87564 1.07988 1.24919 0.93687 0.96159 1.03012 1.86533 1.35282 1.36112 1.79352 0.93459 0.83748 0.73304 0.78181 0.91792 0.88474 0.89812 0.74362 0.89004 0.87929 0.83685 0.84430 0.84151 0.82880 0.88354 0.91532 0.80200 0.79626 0.88004 0.74869 1.20738 1.23677 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.58 9.39 127.77 1.20 1.78 16 2 N -0.41 -2.92 3.16 -519.70 -1.64 -4.56 16 3 C -0.09 -0.51 6.89 40.35 0.28 -0.23 16 4 C 0.59 4.13 7.77 86.45 0.67 4.80 16 5 O -0.59 -8.63 14.19 -4.32 -0.06 -8.69 16 6 N -0.69 0.79 5.25 -444.01 -2.33 -1.54 16 7 C 0.12 -0.20 4.35 45.52 0.20 0.00 16 8 H 0.09 0.27 7.41 -2.39 -0.02 0.26 16 9 C -0.12 0.79 7.29 31.12 0.23 1.01 16 10 C -0.06 0.40 3.86 -11.01 -0.04 0.36 16 11 H 0.12 -1.11 8.09 -2.39 -0.02 -1.13 16 12 C -0.07 0.21 5.29 -19.86 -0.11 0.11 16 13 C -0.11 0.20 8.55 22.26 0.19 0.39 16 14 C -0.12 -0.10 9.83 22.29 0.22 0.12 16 15 C -0.06 -0.14 6.32 22.32 0.14 0.00 16 16 Cl -0.08 -0.35 28.96 -2.72 -0.08 -0.42 16 17 C -0.12 -0.01 9.83 22.29 0.22 0.21 16 18 C -0.10 0.30 9.71 22.27 0.22 0.52 16 19 C -0.14 0.44 7.26 31.12 0.23 0.67 16 20 C -0.12 0.11 10.36 22.57 0.23 0.34 16 21 C -0.21 0.29 9.37 22.01 0.21 0.50 16 22 C 0.04 0.12 6.18 41.34 0.26 0.37 16 23 C -0.07 0.15 2.88 71.23 0.20 0.36 16 24 O -0.56 0.00 10.43 -148.98 -1.55 -1.55 16 25 Si 0.81 -3.62 31.10 68.60 2.13 -1.49 16 26 H 0.06 0.53 8.14 -2.38 -0.02 0.51 16 27 H 0.10 0.38 6.95 -2.39 -0.02 0.36 16 28 H 0.08 0.84 6.12 -2.39 -0.01 0.83 16 29 H 0.42 -3.14 7.60 -92.71 -0.70 -3.84 16 30 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 31 H 0.10 -0.66 7.66 -2.39 -0.02 -0.68 16 32 H 0.15 -0.73 6.72 -2.91 -0.02 -0.75 16 33 H 0.14 -0.13 8.06 -2.91 -0.02 -0.15 16 34 H 0.14 -0.29 8.06 -2.91 -0.02 -0.32 16 35 H 0.15 -1.18 8.05 -2.91 -0.02 -1.20 16 36 H 0.10 -0.34 6.39 -2.39 -0.02 -0.36 16 37 H 0.07 -0.04 8.14 -2.38 -0.02 -0.06 16 38 H 0.18 -1.59 7.45 -2.91 -0.02 -1.62 16 39 H 0.19 -1.67 6.85 -2.91 -0.02 -1.69 16 40 H 0.10 -0.64 7.96 -2.39 -0.02 -0.66 16 41 H 0.40 -3.32 8.74 -74.05 -0.65 -3.96 16 42 H -0.28 0.28 7.11 99.48 0.71 0.99 16 43 H -0.31 -1.54 7.11 99.48 0.71 -0.83 16 Total: 0.00 -22.81 368.96 0.76 -22.05 By element: Atomic # 1 Polarization: -14.83 SS G_CDS: -0.25 Total: -15.08 kcal Atomic # 6 Polarization: 6.75 SS G_CDS: 4.54 Total: 11.29 kcal Atomic # 7 Polarization: -2.13 SS G_CDS: -3.97 Total: -6.10 kcal Atomic # 8 Polarization: -8.63 SS G_CDS: -1.61 Total: -10.25 kcal Atomic # 14 Polarization: -3.62 SS G_CDS: 2.13 Total: -1.49 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -0.08 Total: -0.42 kcal Total: -22.81 0.76 -22.05 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.649 kcal (2) G-P(sol) polarization free energy of solvation -22.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.052 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds