Wall clock time and date at job start Mon Mar 8 2021 05:00:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50699 * 109.47158 * 240.00413 * 2 1 3 5 5 C 1.38340 * 119.87245 * 119.72433 * 4 2 1 6 6 C 1.38000 * 120.12364 * 179.72744 * 5 4 2 7 7 C 1.39399 * 119.87572 * 0.54334 * 6 5 4 8 8 C 1.48269 * 120.12886 * 179.70838 * 7 6 5 9 9 C 1.39511 * 119.97676 * 179.75077 * 8 7 6 10 10 C 1.37660 * 120.02396 * 179.72587 * 9 8 7 11 11 C 1.39709 * 119.97925 * 0.54267 * 10 9 8 12 12 C 1.47715 * 120.02732 * 179.70570 * 11 10 9 13 13 O 1.21573 * 119.99673 * 180.02562 * 12 11 10 14 14 N 1.34778 * 120.00164 * 0.02562 * 12 11 10 15 15 C 1.46497 * 119.99820 * 180.02562 * 14 12 11 16 16 H 1.08994 * 112.85370 * 336.19409 * 15 14 12 17 17 C 1.53789 * 113.61224 * 107.50451 * 15 14 12 18 18 C 1.53785 * 87.08240 * 89.11156 * 17 15 14 19 19 H 1.08989 * 113.61382 * 270.88782 * 18 17 15 20 20 C 1.50704 * 113.61283 * 139.97642 * 18 17 15 21 21 C 1.38239 * 119.98949 * 322.23441 * 20 18 17 22 22 C 1.38215 * 120.01389 * 179.72692 * 21 20 18 23 23 C 1.38345 * 119.98357 * 0.54248 * 22 21 20 24 24 Cl 1.73605 * 120.01387 * 179.74875 * 23 22 21 25 25 C 1.38360 * 119.97495 * 359.72889 * 23 22 21 26 26 C 1.38209 * 119.98363 * 0.02562 * 25 23 22 27 27 C 1.53782 * 113.61323 * 204.99668 * 15 14 12 28 28 C 1.39709 * 119.94826 * 359.72755 * 11 10 9 29 29 C 1.37663 * 119.97525 * 0.02562 * 28 11 10 30 30 C 1.39405 * 119.74389 * 359.72651 * 7 6 5 31 31 C 1.37997 * 119.87229 * 0.02562 * 30 7 6 32 32 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 33 33 H 1.09000 * 109.47411 * 120.00061 * 2 1 3 34 34 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 35 35 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 36 36 H 1.07998 * 119.93240 * 359.97438 * 5 4 2 37 37 H 1.08006 * 120.05973 * 180.27517 * 6 5 4 38 38 H 1.08002 * 119.98557 * 359.97293 * 9 8 7 39 39 H 1.08000 * 120.01467 * 180.27293 * 10 9 8 40 40 H 0.96996 * 119.99831 * 359.97438 * 14 12 11 41 41 H 1.09004 * 113.60861 * 203.65914 * 17 15 14 42 42 H 1.08992 * 113.61561 * 334.56255 * 17 15 14 43 43 H 1.08000 * 119.99063 * 359.97438 * 21 20 18 44 44 H 1.07996 * 120.00566 * 180.27337 * 22 21 20 45 45 H 1.08001 * 120.00268 * 179.97438 * 25 23 22 46 46 H 1.08008 * 119.99193 * 180.02562 * 26 25 23 47 47 H 1.09004 * 113.61336 * 25.43559 * 27 15 14 48 48 H 1.08997 * 113.61508 * 156.33636 * 27 15 14 49 49 H 1.07997 * 120.01436 * 180.02562 * 28 11 10 50 50 H 1.08003 * 119.98791 * 179.97438 * 29 28 11 51 51 H 1.08001 * 120.06291 * 180.02562 * 30 7 6 52 52 H 1.07994 * 119.94067 * 179.97438 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7217 -0.0337 -2.1422 6 6 3.1892 -0.6807 -3.2679 7 6 2.8542 -2.0153 -3.4913 8 6 3.3480 -2.7140 -4.7021 9 6 3.0151 -4.0512 -4.9199 10 6 3.4684 -4.6993 -6.0466 11 6 4.2715 -4.0208 -6.9666 12 6 4.7639 -4.7170 -8.1728 13 8 5.4631 -4.1262 -8.9728 14 7 4.4380 -6.0073 -8.3864 15 6 4.9268 -6.6979 -9.5823 16 1 5.1708 -6.0146 -10.3957 17 6 6.0291 -7.7298 -9.2904 18 6 4.9037 -8.7588 -9.0910 19 1 4.5337 -8.8082 -8.0671 20 6 5.2170 -10.1154 -9.6679 21 6 5.9042 -10.2160 -10.8631 22 6 6.1967 -11.4600 -11.3898 23 6 5.7918 -12.6044 -10.7262 24 17 6.1532 -14.1671 -11.3903 25 6 5.0992 -12.5029 -9.5327 26 6 4.8117 -11.2585 -9.0046 27 6 4.0438 -7.8803 -10.0150 28 6 4.6090 -2.6833 -6.7448 29 6 4.1504 -2.0357 -5.6199 30 6 2.0527 -2.6903 -2.5719 31 6 1.5952 -2.0346 -1.4471 32 1 -0.3934 0.4417 -0.7650 33 1 1.7923 -0.5138 0.8900 34 1 1.5614 2.4679 1.2086 35 1 3.5344 1.7704 -0.0321 36 1 2.9767 1.0016 -1.9706 37 1 3.8100 -0.1528 -3.9768 38 1 2.3981 -4.5770 -4.2061 39 1 3.2069 -5.7332 -6.2172 40 1 3.8804 -6.4787 -7.7479 41 1 6.6672 -7.9414 -10.1484 42 1 6.5945 -7.5198 -8.3826 43 1 6.2160 -9.3225 -11.3835 44 1 6.7375 -11.5385 -12.3213 45 1 4.7825 -13.3960 -9.0145 46 1 4.2713 -11.1791 -8.0728 47 1 3.0065 -7.7917 -9.6920 48 1 4.1392 -8.1330 -11.0709 49 1 5.2295 -2.1577 -7.4555 50 1 4.4115 -1.0019 -5.4480 51 1 1.7903 -3.7245 -2.7395 52 1 0.9739 -2.5564 -0.7343 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_13158362.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:00:16 Heat of formation + Delta-G solvation = 40.098769 kcal Electronic energy + Delta-G solvation = -34381.689213 eV Core-core repulsion = 29690.089060 eV Total energy + Delta-G solvation = -4691.600153 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.128 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -41.78679 -41.08232 -40.49264 -39.44439 -38.72750 -37.50107 -37.35016 -34.83110 -33.86295 -32.57369 -32.07531 -31.70062 -31.49363 -30.60938 -27.18393 -26.69954 -26.07351 -24.64201 -24.51547 -23.83167 -22.75567 -22.52401 -22.27980 -21.34679 -20.20231 -19.24226 -18.49575 -18.23087 -17.75155 -17.26505 -16.86827 -16.60625 -16.45374 -16.23110 -16.09952 -16.01053 -15.87904 -15.43400 -15.30339 -15.10173 -15.00972 -14.89388 -14.71390 -14.57302 -14.38030 -14.29644 -14.17192 -14.02360 -13.65662 -13.56781 -13.48274 -13.25836 -13.14837 -12.73209 -12.60156 -12.54098 -12.44002 -12.07392 -12.00956 -11.94242 -11.75033 -11.60147 -11.58643 -11.22366 -11.11886 -10.78008 -10.39922 -10.14602 -10.05119 -10.00478 -9.95021 -9.49536 -9.06027 -5.01139 -0.68310 0.12384 0.32306 0.36252 0.41293 0.50876 1.16721 1.30850 1.61700 1.78295 1.95581 2.02000 2.58951 2.61832 3.02190 3.40701 3.45052 3.53916 3.63519 3.65496 3.67490 3.72146 3.80636 3.85187 3.89036 3.94933 3.97312 4.02158 4.06822 4.20633 4.28303 4.30045 4.36371 4.37986 4.43712 4.48315 4.62836 4.65838 4.69030 4.73286 4.78350 4.83810 4.89580 4.91968 4.93060 5.02135 5.05232 5.09686 5.12766 5.15783 5.21781 5.26163 5.27830 5.28006 5.42634 5.49957 5.51061 5.65412 5.66503 5.80927 5.84476 5.94138 6.44895 6.76217 7.12650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.073 4.073 3 Si 0.771 3.229 4 C -0.119 4.119 5 C -0.121 4.121 6 C -0.107 4.107 7 C -0.060 4.060 8 C -0.022 4.022 9 C -0.121 4.121 10 C -0.073 4.073 11 C -0.152 4.152 12 C 0.559 3.441 13 O -0.580 6.580 14 N -0.694 5.694 15 C 0.113 3.887 16 H 0.086 0.914 17 C -0.144 4.144 18 C -0.065 4.065 19 H 0.117 0.883 20 C -0.068 4.068 21 C -0.108 4.108 22 C -0.119 4.119 23 C -0.055 4.055 24 Cl -0.084 7.084 25 C -0.119 4.119 26 C -0.105 4.105 27 C -0.124 4.124 28 C -0.070 4.070 29 C -0.123 4.123 30 C -0.107 4.107 31 C -0.102 4.102 32 H 0.395 0.605 33 H 0.107 0.893 34 H -0.301 1.301 35 H -0.286 1.286 36 H 0.144 0.856 37 H 0.146 0.854 38 H 0.156 0.844 39 H 0.159 0.841 40 H 0.415 0.585 41 H 0.098 0.902 42 H 0.068 0.932 43 H 0.146 0.854 44 H 0.138 0.862 45 H 0.140 0.860 46 H 0.153 0.847 47 H 0.091 0.909 48 H 0.102 0.898 49 H 0.128 0.872 50 H 0.148 0.852 51 H 0.147 0.853 52 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.196 0.344 1.445 4.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.183 4.183 3 Si 0.678 3.322 4 C -0.119 4.119 5 C -0.138 4.138 6 C -0.125 4.125 7 C -0.060 4.060 8 C -0.023 4.023 9 C -0.138 4.138 10 C -0.092 4.092 11 C -0.155 4.155 12 C 0.348 3.652 13 O -0.461 6.461 14 N -0.346 5.346 15 C 0.007 3.993 16 H 0.104 0.896 17 C -0.182 4.182 18 C -0.083 4.083 19 H 0.135 0.865 20 C -0.068 4.068 21 C -0.126 4.126 22 C -0.138 4.138 23 C -0.082 4.082 24 Cl -0.055 7.055 25 C -0.137 4.137 26 C -0.123 4.123 27 C -0.162 4.162 28 C -0.089 4.089 29 C -0.140 4.140 30 C -0.125 4.125 31 C -0.120 4.120 32 H 0.245 0.755 33 H 0.124 0.876 34 H -0.230 1.230 35 H -0.213 1.213 36 H 0.161 0.839 37 H 0.164 0.836 38 H 0.173 0.827 39 H 0.176 0.824 40 H 0.254 0.746 41 H 0.116 0.884 42 H 0.086 0.914 43 H 0.164 0.836 44 H 0.156 0.844 45 H 0.158 0.842 46 H 0.171 0.829 47 H 0.109 0.891 48 H 0.120 0.880 49 H 0.146 0.854 50 H 0.165 0.835 51 H 0.164 0.836 52 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -3.119 0.868 1.763 3.686 hybrid contribution 0.269 -1.055 0.276 1.123 sum -2.850 -0.187 2.040 3.509 Atomic orbital electron populations 1.86467 1.17139 1.82137 1.50548 1.25139 0.85345 1.10552 0.97282 0.93745 0.77881 0.75677 0.84867 1.20527 0.98956 0.95449 0.96957 1.21139 0.98149 1.00217 0.94316 1.21483 0.99394 0.93866 0.97721 1.18934 0.98747 0.94145 0.94185 1.19152 0.95795 0.94071 0.93254 1.21472 1.00553 0.93652 0.98132 1.21467 0.94460 1.00720 0.92517 1.19982 1.03550 0.95675 0.96332 1.18549 0.79219 0.81994 0.85437 1.90777 1.39841 1.67314 1.48128 1.45458 1.52968 1.10940 1.25203 1.21891 0.96202 0.93314 0.87874 0.89574 1.23575 0.96642 0.94878 1.03113 1.21630 0.97206 0.89079 1.00377 0.86460 1.19970 0.96918 0.95311 0.94572 1.21204 0.98305 0.97199 0.95934 1.21246 1.00512 0.91220 1.00791 1.21175 1.03479 0.86455 0.97081 1.98382 1.93740 1.27743 1.85649 1.21289 0.98401 0.99668 0.94368 1.21311 0.99555 0.90652 1.00780 1.23387 0.99298 0.92501 1.00989 1.21261 0.97274 0.93441 0.96943 1.21387 0.97897 1.01266 0.93498 1.21519 0.96606 1.00915 0.93416 1.21091 0.99216 0.94046 0.97670 0.75464 0.87556 1.22956 1.21328 0.83921 0.83635 0.82668 0.82383 0.74609 0.88380 0.91368 0.83636 0.84421 0.84197 0.82934 0.89088 0.87991 0.85446 0.83455 0.83579 0.85062 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.58 12.76 -148.98 -1.90 -1.32 16 2 C -0.07 0.13 2.82 71.24 0.20 0.33 16 3 Si 0.77 -2.22 29.77 68.60 2.04 -0.18 16 4 C -0.12 0.19 5.40 -19.82 -0.11 0.09 16 5 C -0.12 0.35 8.65 22.24 0.19 0.55 16 6 C -0.11 0.28 9.43 22.49 0.21 0.49 16 7 C -0.06 0.10 5.88 -20.05 -0.12 -0.02 16 8 C -0.02 0.04 5.88 -20.00 -0.12 -0.08 16 9 C -0.12 0.55 9.41 22.44 0.21 0.76 16 10 C -0.07 0.36 9.52 22.49 0.21 0.57 16 11 C -0.15 -0.18 5.88 -20.06 -0.12 -0.29 16 12 C 0.56 2.36 7.77 86.75 0.67 3.03 16 13 O -0.58 -7.63 15.93 -3.94 -0.06 -7.69 16 14 N -0.69 2.18 5.21 -443.02 -2.31 -0.13 16 15 C 0.11 -0.32 4.33 45.52 0.20 -0.13 16 16 H 0.09 0.18 7.46 -2.39 -0.02 0.16 16 17 C -0.14 0.59 7.25 31.12 0.23 0.82 16 18 C -0.06 0.47 3.86 -11.01 -0.04 0.43 16 19 H 0.12 -1.24 8.09 -2.39 -0.02 -1.26 16 20 C -0.07 0.26 5.29 -19.86 -0.11 0.15 16 21 C -0.11 0.26 8.59 22.26 0.19 0.46 16 22 C -0.12 -0.04 9.83 22.29 0.22 0.18 16 23 C -0.06 -0.12 6.32 22.32 0.14 0.02 16 24 Cl -0.08 -0.32 28.96 -2.72 -0.08 -0.40 16 25 C -0.12 0.04 9.83 22.29 0.22 0.26 16 26 C -0.11 0.36 9.71 22.26 0.22 0.58 16 27 C -0.12 0.90 7.29 31.12 0.23 1.13 16 28 C -0.07 -0.17 9.58 22.49 0.22 0.04 16 29 C -0.12 0.09 9.41 22.44 0.21 0.30 16 30 C -0.11 0.29 9.43 22.49 0.21 0.50 16 31 C -0.10 0.15 9.59 22.24 0.21 0.36 16 32 H 0.40 -3.54 8.70 -74.06 -0.64 -4.18 16 33 H 0.11 -0.04 7.96 -2.39 -0.02 -0.06 16 34 H -0.30 -1.51 7.11 99.48 0.71 -0.80 16 35 H -0.29 -0.52 7.11 99.48 0.71 0.18 16 36 H 0.14 -0.93 4.86 -2.91 -0.01 -0.94 16 37 H 0.15 -0.91 6.19 -2.91 -0.02 -0.93 16 38 H 0.16 -1.47 6.19 -2.91 -0.02 -1.48 16 39 H 0.16 -1.90 6.39 -2.91 -0.02 -1.92 16 40 H 0.42 -4.03 6.72 -92.71 -0.62 -4.65 16 41 H 0.10 -0.43 6.32 -2.38 -0.02 -0.44 16 42 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 43 H 0.15 -0.82 6.67 -2.91 -0.02 -0.84 16 44 H 0.14 -0.19 8.06 -2.91 -0.02 -0.22 16 45 H 0.14 -0.35 8.06 -2.91 -0.02 -0.37 16 46 H 0.15 -1.27 8.06 -2.91 -0.02 -1.30 16 47 H 0.09 -0.83 8.14 -2.38 -0.02 -0.85 16 48 H 0.10 -0.72 7.71 -2.39 -0.02 -0.74 16 49 H 0.13 0.53 7.64 -2.91 -0.02 0.50 16 50 H 0.15 -0.66 6.19 -2.91 -0.02 -0.68 16 51 H 0.15 -1.04 6.19 -2.91 -0.02 -1.06 16 52 H 0.13 -0.30 8.06 -2.91 -0.02 -0.33 16 Total: 0.00 -22.62 439.59 1.05 -21.57 By element: Atomic # 1 Polarization: -22.14 SS G_CDS: -0.22 Total: -22.36 kcal Atomic # 6 Polarization: 6.93 SS G_CDS: 3.58 Total: 10.52 kcal Atomic # 7 Polarization: 2.18 SS G_CDS: -2.31 Total: -0.13 kcal Atomic # 8 Polarization: -7.05 SS G_CDS: -1.96 Total: -9.02 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: 2.04 Total: -0.18 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -0.08 Total: -0.40 kcal Total: -22.62 1.05 -21.57 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_13158362.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.665 kcal (2) G-P(sol) polarization free energy of solvation -22.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.045 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.053 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.566 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.099 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.83 seconds