Wall clock time and date at job start Mon Mar 8 2021 05:00:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86301 * 109.46885 * 2 1 4 4 C 1.50702 * 109.47033 * 119.99809 * 2 1 3 5 5 C 1.34188 * 126.54079 * 254.98171 * 4 2 1 6 6 N 1.36865 * 109.96839 * 180.02562 * 5 4 2 7 7 C 1.37402 * 109.98047 * 359.97175 * 6 5 4 8 8 C 1.39322 * 133.24969 * 179.97438 * 7 6 5 9 9 C 1.36355 * 120.23630 * 180.02562 * 8 7 6 10 10 C 1.40169 * 120.66571 * 359.97438 * 9 8 7 11 11 C 1.47653 * 119.96995 * 180.02562 * 10 9 8 12 12 O 1.21581 * 120.00334 * 180.02562 * 11 10 9 13 13 N 1.34783 * 120.00351 * 0.02562 * 11 10 9 14 14 C 1.46493 * 120.00284 * 179.97438 * 13 11 10 15 15 H 1.08997 * 112.85222 * 336.19848 * 14 13 11 16 16 C 1.53789 * 113.61224 * 107.50280 * 14 13 11 17 17 C 1.53784 * 87.07833 * 89.11745 * 16 14 13 18 18 H 1.09002 * 113.68902 * 270.87127 * 17 16 14 19 19 C 1.50701 * 113.60989 * 139.98113 * 17 16 14 20 20 C 1.38236 * 119.98948 * 322.22752 * 19 17 16 21 21 C 1.38218 * 120.01217 * 179.72950 * 20 19 17 22 22 C 1.38348 * 119.98633 * 0.54271 * 21 20 19 23 23 Cl 1.73603 * 120.01507 * 179.74781 * 22 21 20 24 24 C 1.38355 * 119.97481 * 359.73401 * 22 21 20 25 25 C 1.38217 * 119.98626 * 359.97438 * 24 22 21 26 26 C 1.53777 * 87.08332 * 25.43112 * 17 16 14 27 27 C 1.39178 * 120.05660 * 0.04309 * 10 9 8 28 28 C 1.39231 * 119.39645 * 359.97438 * 27 10 9 29 29 H 0.96699 * 114.00186 * 300.00045 * 1 2 3 30 30 H 1.08993 * 109.47403 * 239.99776 * 2 1 3 31 31 H 1.48503 * 109.99870 * 178.67862 * 3 2 1 32 32 H 1.48506 * 109.99836 * 299.99763 * 3 2 1 33 33 H 1.08006 * 125.01399 * 359.97438 * 5 4 2 34 34 H 0.96996 * 125.00717 * 179.97438 * 6 5 4 35 35 H 1.07999 * 119.87993 * 0.30696 * 8 7 6 36 36 H 1.08001 * 119.66200 * 179.97438 * 9 8 7 37 37 H 0.97003 * 119.99414 * 0.02562 * 13 11 10 38 38 H 1.09004 * 113.61266 * 203.66239 * 16 14 13 39 39 H 1.08998 * 113.61512 * 334.57051 * 16 14 13 40 40 H 1.08001 * 119.99347 * 0.02562 * 20 19 17 41 41 H 1.08000 * 120.00295 * 180.27096 * 21 20 19 42 42 H 1.08002 * 120.00661 * 179.97438 * 24 22 21 43 43 H 1.07993 * 119.99275 * 180.02562 * 25 24 22 44 44 H 1.08997 * 113.61681 * 220.01398 * 26 17 16 45 45 H 1.09005 * 113.68729 * 89.12219 * 26 17 16 46 46 H 1.08007 * 120.30451 * 179.97438 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4611 -0.1386 2.3228 6 7 2.8035 -1.1004 3.2344 7 6 2.4954 -2.3454 2.7414 8 6 2.6346 -3.6349 3.2503 9 6 2.2303 -4.7103 2.5159 10 6 1.6700 -4.5367 1.2428 11 6 1.2369 -5.7120 0.4611 12 8 0.7513 -5.5621 -0.6434 13 7 1.3799 -6.9511 0.9718 14 6 0.9497 -8.1171 0.1963 15 1 0.1880 -7.8750 -0.5448 16 6 2.1158 -8.9481 -0.3648 17 6 2.0791 -9.7430 0.9512 18 1 2.7077 -9.3211 1.7354 19 6 2.2876 -11.2242 0.7676 20 6 1.7414 -11.8684 -0.3268 21 6 1.9370 -13.2259 -0.4986 22 6 2.6700 -13.9419 0.4309 23 17 2.9106 -15.6481 0.2193 24 6 3.2116 -13.2977 1.5290 25 6 3.0205 -11.9391 1.6966 26 6 0.5998 -9.3383 1.0630 27 6 1.5220 -3.2574 0.7149 28 6 1.9343 -2.1576 1.4626 29 1 -0.3933 0.4417 0.7650 30 1 1.7924 -0.5138 -0.8899 31 1 3.5346 1.7703 0.0322 32 1 1.5615 2.4679 -1.2086 33 1 2.5978 0.9237 2.4618 34 1 3.2045 -0.9284 4.1007 35 1 3.0601 -3.7829 4.2319 36 1 2.3430 -5.7058 2.9192 37 1 1.7670 -7.0706 1.8531 38 1 1.8485 -9.5402 -1.2401 39 1 3.0328 -8.3756 -0.5036 40 1 1.1658 -11.3101 -1.0502 41 1 1.5139 -13.7282 -1.3559 42 1 3.7836 -13.8563 2.2551 43 1 3.4435 -11.4361 2.5535 44 1 0.2930 -9.0808 2.0767 45 1 -0.0830 -10.0363 0.5785 46 1 1.0911 -3.1190 -0.2658 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:00:36 Heat of formation + Delta-G solvation = 41.804928 kcal Electronic energy + Delta-G solvation = -30598.340366 eV Core-core repulsion = 26253.378187 eV Total energy + Delta-G solvation = -4344.962179 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.108 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.45715 -41.61266 -40.47478 -39.01579 -37.92077 -37.42873 -37.32434 -34.63320 -33.25501 -32.08144 -31.72745 -30.74441 -30.31379 -26.70537 -26.48472 -26.35322 -24.77047 -23.82132 -23.46590 -22.55099 -21.73750 -20.77796 -20.16692 -19.33362 -18.58902 -18.18538 -17.49907 -17.34926 -16.97887 -16.61459 -16.38629 -16.22303 -15.97517 -15.74009 -15.54000 -15.31690 -15.13102 -14.89578 -14.76627 -14.71108 -14.55413 -14.34333 -14.07785 -13.77913 -13.66460 -13.59738 -13.48336 -13.24347 -12.64651 -12.59536 -12.43347 -12.35900 -12.19272 -12.00852 -11.92748 -11.75065 -11.60264 -11.22781 -11.11388 -10.79801 -10.32811 -10.16870 -10.00660 -9.49859 -9.32161 -8.80011 -5.01147 -0.16321 0.12228 0.20971 0.32181 1.16392 1.35561 1.53488 1.70994 1.82008 2.02618 2.05182 2.14306 2.59066 2.87740 3.44861 3.61127 3.63446 3.66277 3.68953 3.75855 3.84888 3.87045 3.93236 3.94785 3.97245 4.14322 4.21236 4.36334 4.37568 4.43318 4.45186 4.54626 4.59615 4.64924 4.73041 4.77660 4.77854 4.86239 4.91005 5.00300 5.01841 5.05244 5.14123 5.26203 5.27085 5.27620 5.34734 5.46934 5.53245 5.58436 5.66036 5.84274 5.99129 6.49079 6.61558 6.87648 7.17192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.054 4.054 3 Si 0.812 3.188 4 C -0.228 4.228 5 C 0.087 3.913 6 N -0.571 5.571 7 C 0.110 3.890 8 C -0.124 4.124 9 C -0.067 4.067 10 C -0.179 4.179 11 C 0.562 3.438 12 O -0.589 6.589 13 N -0.693 5.693 14 C 0.112 3.888 15 H 0.082 0.918 16 C -0.144 4.144 17 C -0.063 4.063 18 H 0.119 0.881 19 C -0.068 4.068 20 C -0.109 4.109 21 C -0.119 4.119 22 C -0.055 4.055 23 Cl -0.084 7.084 24 C -0.118 4.118 25 C -0.104 4.104 26 C -0.123 4.123 27 C -0.025 4.025 28 C -0.130 4.130 29 H 0.393 0.607 30 H 0.083 0.917 31 H -0.279 1.279 32 H -0.308 1.308 33 H 0.221 0.779 34 H 0.440 0.560 35 H 0.163 0.837 36 H 0.162 0.838 37 H 0.416 0.584 38 H 0.097 0.903 39 H 0.067 0.933 40 H 0.144 0.856 41 H 0.137 0.863 42 H 0.141 0.859 43 H 0.154 0.846 44 H 0.092 0.908 45 H 0.101 0.899 46 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.976 4.673 11.259 12.548 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.162 4.162 3 Si 0.716 3.284 4 C -0.235 4.235 5 C -0.040 4.040 6 N -0.175 5.175 7 C 0.001 3.999 8 C -0.144 4.144 9 C -0.087 4.087 10 C -0.183 4.183 11 C 0.352 3.648 12 O -0.470 6.470 13 N -0.345 5.345 14 C 0.006 3.994 15 H 0.100 0.900 16 C -0.183 4.183 17 C -0.081 4.081 18 H 0.137 0.863 19 C -0.068 4.068 20 C -0.127 4.127 21 C -0.138 4.138 22 C -0.082 4.082 23 Cl -0.055 7.055 24 C -0.137 4.137 25 C -0.122 4.122 26 C -0.161 4.161 27 C -0.045 4.045 28 C -0.134 4.134 29 H 0.243 0.757 30 H 0.100 0.900 31 H -0.206 1.206 32 H -0.236 1.236 33 H 0.237 0.763 34 H 0.281 0.719 35 H 0.181 0.819 36 H 0.179 0.821 37 H 0.255 0.745 38 H 0.115 0.885 39 H 0.085 0.915 40 H 0.162 0.838 41 H 0.155 0.845 42 H 0.159 0.841 43 H 0.172 0.828 44 H 0.110 0.890 45 H 0.120 0.880 46 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 3.275 4.921 9.647 11.314 hybrid contribution 0.243 -1.176 -0.373 1.257 sum 3.518 3.745 9.274 10.602 Atomic orbital electron populations 1.86488 1.18154 1.82422 1.50257 1.24755 0.84596 1.11278 0.95587 0.94057 0.76960 0.72400 0.84977 1.20857 1.11868 0.91560 0.99236 1.22239 0.97929 0.95901 0.87928 1.41781 1.53702 1.03132 1.18865 1.18642 0.99699 0.88007 0.93584 1.20081 1.04258 0.87966 1.02135 1.20885 0.95927 1.00319 0.91546 1.19564 1.09107 0.92071 0.97604 1.18500 0.77103 0.84043 0.85136 1.90768 1.46885 1.86800 1.22594 1.45394 1.63492 1.04179 1.21397 1.21886 0.97510 0.84828 0.95176 0.90010 1.23575 0.98907 0.97894 0.97884 1.21615 0.97896 0.89714 0.98845 0.86293 1.19972 0.96566 0.95866 0.94379 1.21199 0.99859 0.93325 0.98336 1.21240 0.98690 0.94785 0.99070 1.21170 1.03229 0.85020 0.98753 1.98381 1.95940 1.13978 1.97177 1.21294 1.00053 0.95537 0.96782 1.21318 0.98204 0.92835 0.99844 1.23378 0.95965 0.95270 1.01461 1.20591 0.94645 0.90944 0.98295 1.19220 1.05111 0.93611 0.95493 0.75685 0.89978 1.20588 1.23629 0.76306 0.71883 0.81927 0.82054 0.74523 0.88481 0.91459 0.83803 0.84464 0.84096 0.82813 0.88974 0.88045 0.87858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -2.57 12.88 -148.98 -1.92 -4.49 16 2 C -0.05 -0.14 3.06 71.24 0.22 0.08 16 3 Si 0.81 -2.69 30.76 68.60 2.11 -0.58 16 4 C -0.23 -0.34 5.58 -18.61 -0.10 -0.44 16 5 C 0.09 -0.57 10.43 82.98 0.87 0.30 16 6 N -0.57 4.05 6.05 -187.48 -1.13 2.91 16 7 C 0.11 -0.06 7.27 39.19 0.28 0.23 16 8 C -0.12 0.50 10.00 22.09 0.22 0.73 16 9 C -0.07 0.17 9.46 22.30 0.21 0.38 16 10 C -0.18 -1.07 5.87 -20.10 -0.12 -1.19 16 11 C 0.56 4.87 7.76 86.73 0.67 5.54 16 12 O -0.59 -10.93 15.93 -3.97 -0.06 -11.00 16 13 N -0.69 0.14 5.21 -443.08 -2.31 -2.17 16 14 C 0.11 -0.03 4.32 45.52 0.20 0.17 16 15 H 0.08 0.43 7.46 -2.39 -0.02 0.41 16 16 C -0.14 0.29 7.25 31.12 0.23 0.52 16 17 C -0.06 0.37 3.86 -11.01 -0.04 0.32 16 18 H 0.12 -1.12 8.09 -2.39 -0.02 -1.14 16 19 C -0.07 0.19 5.29 -19.86 -0.11 0.08 16 20 C -0.11 0.14 8.60 22.26 0.19 0.33 16 21 C -0.12 -0.15 9.83 22.29 0.22 0.07 16 22 C -0.06 -0.15 6.32 22.32 0.14 -0.01 16 23 Cl -0.08 -0.36 28.96 -2.72 -0.08 -0.44 16 24 C -0.12 -0.02 9.83 22.29 0.22 0.20 16 25 C -0.10 0.29 9.71 22.27 0.22 0.51 16 26 C -0.12 0.68 7.29 31.12 0.23 0.91 16 27 C -0.02 -0.26 9.64 22.73 0.22 -0.04 16 28 C -0.13 -0.77 6.34 -20.21 -0.13 -0.90 16 29 H 0.39 -2.02 8.70 -74.06 -0.64 -2.67 16 30 H 0.08 0.60 7.96 -2.39 -0.02 0.58 16 31 H -0.28 -0.14 7.11 99.48 0.71 0.57 16 32 H -0.31 -1.73 7.11 99.48 0.71 -1.02 16 33 H 0.22 -3.43 6.35 -2.91 -0.02 -3.45 16 34 H 0.44 -6.31 8.96 -92.71 -0.83 -7.15 16 35 H 0.16 -1.82 8.06 -2.91 -0.02 -1.84 16 36 H 0.16 -1.68 6.36 -2.91 -0.02 -1.69 16 37 H 0.42 -3.10 6.70 -92.71 -0.62 -3.72 16 38 H 0.10 -0.22 6.32 -2.38 -0.02 -0.23 16 39 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 40 H 0.14 -0.59 6.67 -2.91 -0.02 -0.61 16 41 H 0.14 -0.06 8.06 -2.91 -0.02 -0.09 16 42 H 0.14 -0.31 8.06 -2.91 -0.02 -0.33 16 43 H 0.15 -1.21 8.05 -2.91 -0.02 -1.24 16 44 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 45 H 0.10 -0.55 7.72 -2.38 -0.02 -0.57 16 46 H 0.10 1.62 7.64 -2.91 -0.02 1.60 16 Total: 0.00 -30.76 399.18 -0.55 -31.31 By element: Atomic # 1 Polarization: -22.34 SS G_CDS: -0.98 Total: -23.32 kcal Atomic # 6 Polarization: 3.94 SS G_CDS: 3.83 Total: 7.78 kcal Atomic # 7 Polarization: 4.18 SS G_CDS: -3.44 Total: 0.74 kcal Atomic # 8 Polarization: -13.50 SS G_CDS: -1.98 Total: -15.48 kcal Atomic # 14 Polarization: -2.69 SS G_CDS: 2.11 Total: -0.58 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -0.08 Total: -0.44 kcal Total: -30.76 -0.55 -31.31 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.110 kcal (2) G-P(sol) polarization free energy of solvation -30.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.352 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.547 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.305 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds