Wall clock time and date at job start Mon Mar 8 2021 05:00:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50699 * 109.47152 * 239.99653 * 2 1 3 5 5 C 1.38550 * 120.32441 * 120.00522 * 4 2 1 6 6 N 1.31518 * 120.90574 * 180.02562 * 5 4 2 7 7 C 1.32717 * 121.64212 * 359.97438 * 6 5 4 8 8 C 1.48174 * 119.72132 * 179.97438 * 7 6 5 9 9 O 1.21515 * 119.99633 * 180.02562 * 8 7 6 10 10 N 1.34773 * 120.00442 * 0.02562 * 8 7 6 11 11 C 1.46498 * 120.00402 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.84392 * 334.66354 * 11 10 8 13 13 C 1.53781 * 113.61649 * 105.85930 * 11 10 8 14 14 C 1.54048 * 86.98513 * 89.16383 * 13 11 10 15 15 H 1.08996 * 113.68759 * 270.87316 * 14 13 11 16 16 C 1.50700 * 113.62165 * 139.97976 * 14 13 11 17 17 C 1.38239 * 119.98354 * 322.22935 * 16 14 13 18 18 C 1.38217 * 120.01317 * 179.72835 * 17 16 14 19 19 C 1.38349 * 119.98311 * 0.54788 * 18 17 16 20 20 Cl 1.73603 * 120.01123 * 179.75033 * 19 18 17 21 21 C 1.38353 * 119.97384 * 359.72366 * 19 18 17 22 22 C 1.38214 * 119.98806 * 0.02562 * 21 19 18 23 23 C 1.53779 * 113.61315 * 203.47075 * 11 10 8 24 24 C 1.39306 * 120.55247 * 0.02562 * 7 6 5 25 25 C 1.38582 * 119.05917 * 359.72697 * 24 7 6 26 26 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 27 27 H 1.09008 * 109.46477 * 119.99697 * 2 1 3 28 28 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 29 29 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 30 30 H 1.08001 * 119.54799 * 359.97438 * 5 4 2 31 31 H 0.96998 * 119.99624 * 359.97438 * 10 8 7 32 32 H 1.08996 * 113.61173 * 203.66462 * 13 11 10 33 33 H 1.08994 * 113.61579 * 334.56968 * 13 11 10 34 34 H 1.08005 * 119.99622 * 359.97438 * 17 16 14 35 35 H 1.08001 * 120.00731 * 180.27642 * 18 17 16 36 36 H 1.08002 * 120.00270 * 179.97438 * 21 19 18 37 37 H 1.07995 * 119.99203 * 180.02562 * 22 21 19 38 38 H 1.08999 * 113.61689 * 25.42525 * 23 11 10 39 39 H 1.09001 * 113.61277 * 156.33557 * 23 11 10 40 40 H 1.08001 * 120.46662 * 180.02562 * 24 7 6 41 41 H 1.08002 * 120.75802 * 180.29456 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7284 -0.0437 -2.1468 6 7 3.1727 -0.6525 -3.2246 7 6 2.8792 -1.9217 -3.4783 8 6 3.4022 -2.5653 -4.7062 9 8 3.1362 -3.7270 -4.9437 10 7 4.1729 -1.8625 -5.5597 11 6 4.6895 -2.4987 -6.7740 12 1 4.7752 -3.5814 -6.6808 13 6 3.9756 -2.0455 -8.0584 14 6 5.0190 -0.9154 -8.1426 15 1 4.7259 -0.0084 -7.6140 16 6 5.5047 -0.6451 -9.5434 17 6 5.6990 -1.6947 -10.4218 18 6 6.1390 -1.4470 -11.7084 19 6 6.3959 -0.1493 -12.1135 20 17 6.9548 0.1620 -13.7274 21 6 6.2066 0.9002 -11.2321 22 6 5.7616 0.6517 -9.9474 23 6 5.9553 -1.8262 -7.3310 24 6 2.0827 -2.6534 -2.6004 25 6 1.6048 -2.0391 -1.4538 26 1 -0.3934 0.4418 0.7650 27 1 1.7923 -0.5138 0.8901 28 1 1.5616 2.4678 -1.2086 29 1 1.5878 2.4586 1.2241 30 1 2.9878 0.9904 -1.9741 31 1 4.3848 -0.9351 -5.3703 32 1 4.0451 -2.7655 -8.8738 33 1 2.9586 -1.6911 -7.8909 34 1 5.5031 -2.7081 -10.1040 35 1 6.2865 -2.2667 -12.3960 36 1 6.4074 1.9134 -11.5477 37 1 5.6134 1.4709 -9.2595 38 1 6.5354 -1.2948 -6.5765 39 1 6.5650 -2.4863 -7.9479 40 1 1.8451 -3.6863 -2.8080 41 1 0.9890 -2.5820 -0.7520 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9610464_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:00:41 Heat of formation + Delta-G solvation = 20.585813 kcal Electronic energy + Delta-G solvation = -25858.900001 eV Core-core repulsion = 21925.007592 eV Total energy + Delta-G solvation = -3933.892409 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.092 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.97318 -41.32960 -40.11577 -38.87501 -38.04928 -37.29304 -34.75605 -33.72178 -33.02483 -32.11649 -31.50084 -28.06355 -26.81736 -26.12506 -25.02212 -24.13444 -23.69130 -22.57836 -21.92019 -20.21378 -19.32948 -18.78687 -18.32689 -18.08900 -17.08241 -16.95169 -16.55166 -16.43928 -16.20770 -16.09065 -15.66196 -15.38328 -15.30360 -14.84561 -14.66779 -14.51763 -14.44932 -14.25811 -14.06603 -14.02210 -13.61898 -13.58599 -13.27900 -12.63867 -12.61894 -12.42363 -12.16285 -12.06339 -11.74359 -11.65975 -11.37869 -11.27836 -11.10476 -10.82017 -10.61543 -10.29812 -10.07493 -10.02014 -9.50248 -5.14882 -0.56794 0.06798 0.11062 0.28593 1.04398 1.21150 1.42545 1.61697 1.78846 1.94971 2.55816 2.64415 2.90188 3.11412 3.35358 3.50640 3.56768 3.59136 3.67361 3.72843 3.77161 3.86769 3.87748 3.88834 4.09825 4.16913 4.19383 4.28937 4.38536 4.52868 4.55153 4.62724 4.69475 4.72979 4.83372 4.86957 4.92888 4.95763 4.97365 5.05473 5.22114 5.24752 5.34967 5.47321 5.58784 5.78294 6.20778 6.31832 6.62125 7.12988 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.076 4.076 3 Si 0.682 3.318 4 C -0.102 4.102 5 C 0.106 3.894 6 N -0.452 5.452 7 C 0.079 3.921 8 C 0.577 3.423 9 O -0.526 6.526 10 N -0.694 5.694 11 C 0.117 3.883 12 H 0.107 0.893 13 C -0.144 4.144 14 C -0.075 4.075 15 H 0.101 0.899 16 C -0.066 4.066 17 C -0.105 4.105 18 C -0.107 4.107 19 C -0.039 4.039 20 Cl -0.071 7.071 21 C -0.108 4.108 22 C -0.103 4.103 23 C -0.134 4.134 24 C -0.107 4.107 25 C -0.052 4.052 26 H 0.385 0.615 27 H 0.085 0.915 28 H -0.250 1.250 29 H -0.255 1.255 30 H 0.165 0.835 31 H 0.413 0.587 32 H 0.097 0.903 33 H 0.076 0.924 34 H 0.133 0.867 35 H 0.134 0.866 36 H 0.133 0.867 37 H 0.132 0.868 38 H 0.080 0.920 39 H 0.100 0.900 40 H 0.153 0.847 41 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.691 2.209 5.017 5.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.186 4.186 3 Si 0.582 3.418 4 C -0.104 4.104 5 C -0.053 4.053 6 N -0.163 5.163 7 C -0.059 4.059 8 C 0.362 3.638 9 O -0.402 6.402 10 N -0.345 5.345 11 C 0.012 3.988 12 H 0.125 0.875 13 C -0.182 4.182 14 C -0.094 4.094 15 H 0.119 0.881 16 C -0.066 4.066 17 C -0.123 4.123 18 C -0.126 4.126 19 C -0.066 4.066 20 Cl -0.042 7.042 21 C -0.127 4.127 22 C -0.121 4.121 23 C -0.172 4.172 24 C -0.128 4.128 25 C -0.078 4.078 26 H 0.233 0.767 27 H 0.103 0.897 28 H -0.174 1.174 29 H -0.180 1.180 30 H 0.181 0.819 31 H 0.249 0.751 32 H 0.115 0.885 33 H 0.095 0.905 34 H 0.151 0.849 35 H 0.152 0.848 36 H 0.151 0.849 37 H 0.149 0.851 38 H 0.099 0.901 39 H 0.119 0.881 40 H 0.171 0.829 41 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 1.972 2.346 3.506 4.657 hybrid contribution -1.553 0.012 1.058 1.879 sum 0.420 2.358 4.564 5.154 Atomic orbital electron populations 1.86576 1.17271 1.80301 1.50112 1.24733 0.84921 1.11336 0.97614 0.95121 0.91424 0.74151 0.81132 1.20538 0.98217 0.95096 0.96573 1.22534 0.94353 0.99587 0.88866 1.67520 1.20557 1.09068 1.19162 1.21125 0.98110 0.90748 0.95956 1.17829 0.78378 0.85563 0.82051 1.90820 1.58142 1.16122 1.75079 1.45487 1.50973 1.16162 1.21881 1.21908 0.94359 0.98893 0.83630 0.87459 1.23623 0.98946 0.97782 0.97873 1.21687 0.97005 0.98509 0.92164 0.88069 1.19799 0.98239 0.93132 0.95433 1.20995 0.99222 0.99481 0.92587 1.21085 0.99468 0.95235 0.96800 1.20994 1.03332 0.95049 0.87196 1.98392 1.87872 1.96083 1.21834 1.21094 0.99654 0.98698 0.93207 1.21047 0.98994 0.96670 0.95437 1.23419 0.95975 0.98522 0.99268 1.22206 0.95197 1.02144 0.93215 1.21531 0.96118 0.93744 0.96413 0.76677 0.89729 1.17384 1.17996 0.81856 0.75076 0.88467 0.90520 0.84902 0.84838 0.84877 0.85056 0.90139 0.88139 0.82916 0.83552 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.37 12.76 -35.23 -0.45 -0.08 16 2 C -0.08 0.16 2.82 36.01 0.10 0.26 16 3 Si 0.68 -1.91 29.82 -169.99 -5.07 -6.98 16 4 C -0.10 0.04 5.44 -104.36 -0.57 -0.53 16 5 C 0.11 -0.03 9.84 -17.57 -0.17 -0.21 16 6 N -0.45 -0.44 9.54 -9.80 -0.09 -0.54 16 7 C 0.08 0.15 6.75 -83.01 -0.56 -0.41 16 8 C 0.58 1.53 7.81 -12.18 -0.10 1.43 16 9 O -0.53 -2.91 15.94 5.35 0.09 -2.83 16 10 N -0.69 -0.07 5.25 -53.86 -0.28 -0.36 16 11 C 0.12 -0.08 4.30 -67.12 -0.29 -0.37 16 12 H 0.11 0.06 7.50 -51.93 -0.39 -0.33 16 13 C -0.14 0.17 7.27 -25.78 -0.19 -0.02 16 14 C -0.08 0.15 3.87 -90.82 -0.35 -0.20 16 15 H 0.10 -0.25 8.09 -51.93 -0.42 -0.68 16 16 C -0.07 0.05 5.29 -104.62 -0.55 -0.51 16 17 C -0.10 0.06 8.60 -39.59 -0.34 -0.28 16 18 C -0.11 -0.04 9.83 -39.55 -0.39 -0.43 16 19 C -0.04 -0.05 6.32 -39.50 -0.25 -0.30 16 20 Cl -0.07 -0.13 28.96 -51.86 -1.50 -1.63 16 21 C -0.11 -0.05 9.83 -39.55 -0.39 -0.44 16 22 C -0.10 0.05 9.71 -39.59 -0.38 -0.34 16 23 C -0.13 0.31 7.29 -25.92 -0.19 0.12 16 24 C -0.11 -0.11 9.63 -39.06 -0.38 -0.49 16 25 C -0.05 0.00 9.77 -39.31 -0.38 -0.38 16 26 H 0.38 -1.76 8.74 45.56 0.40 -1.36 16 27 H 0.08 -0.33 7.96 -51.92 -0.41 -0.75 16 28 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 29 H -0.26 0.17 7.11 56.52 0.40 0.57 16 30 H 0.16 -0.45 4.89 -52.49 -0.26 -0.71 16 31 H 0.41 -0.52 8.03 -40.82 -0.33 -0.85 16 32 H 0.10 -0.17 6.33 -51.93 -0.33 -0.50 16 33 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 34 H 0.13 -0.31 6.68 -52.48 -0.35 -0.66 16 35 H 0.13 -0.10 8.06 -52.49 -0.42 -0.53 16 36 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 37 H 0.13 -0.29 8.05 -52.49 -0.42 -0.72 16 38 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 39 H 0.10 -0.27 7.71 -51.93 -0.40 -0.67 16 40 H 0.15 0.09 7.64 -52.49 -0.40 -0.31 16 41 H 0.15 -0.24 8.06 -52.49 -0.42 -0.66 16 LS Contribution 362.93 15.07 5.47 5.47 Total: 0.00 -7.59 362.93 -11.84 -19.43 By element: Atomic # 1 Polarization: -4.78 SS G_CDS: -4.62 Total: -9.40 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -5.38 Total: -3.08 kcal Atomic # 7 Polarization: -0.52 SS G_CDS: -0.38 Total: -0.90 kcal Atomic # 8 Polarization: -2.54 SS G_CDS: -0.36 Total: -2.91 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: -5.07 Total: -6.98 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -1.50 Total: -1.63 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -7.59 -11.84 -19.43 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.013 kcal (2) G-P(sol) polarization free energy of solvation -7.587 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.427 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.841 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.427 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds