Wall clock time and date at job start Mon Mar 8 2021 05:00:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50699 * 109.47152 * 239.99653 * 2 1 3 5 5 C 1.38550 * 120.32441 * 120.00522 * 4 2 1 6 6 N 1.31518 * 120.90574 * 180.02562 * 5 4 2 7 7 C 1.32717 * 121.64212 * 359.97438 * 6 5 4 8 8 C 1.48174 * 119.72132 * 179.97438 * 7 6 5 9 9 O 1.21515 * 119.99633 * 180.02562 * 8 7 6 10 10 N 1.34773 * 120.00442 * 0.02562 * 8 7 6 11 11 C 1.46498 * 120.00402 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.84392 * 334.66354 * 11 10 8 13 13 C 1.53781 * 113.61649 * 105.85930 * 11 10 8 14 14 C 1.54048 * 86.98513 * 89.16383 * 13 11 10 15 15 H 1.08996 * 113.68759 * 270.87316 * 14 13 11 16 16 C 1.50700 * 113.62165 * 139.97976 * 14 13 11 17 17 C 1.38239 * 119.98354 * 322.22935 * 16 14 13 18 18 C 1.38217 * 120.01317 * 179.72835 * 17 16 14 19 19 C 1.38349 * 119.98311 * 0.54788 * 18 17 16 20 20 Cl 1.73603 * 120.01123 * 179.75033 * 19 18 17 21 21 C 1.38353 * 119.97384 * 359.72366 * 19 18 17 22 22 C 1.38214 * 119.98806 * 0.02562 * 21 19 18 23 23 C 1.53779 * 113.61315 * 203.47075 * 11 10 8 24 24 C 1.39306 * 120.55247 * 0.02562 * 7 6 5 25 25 C 1.38582 * 119.05917 * 359.72697 * 24 7 6 26 26 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 27 27 H 1.09008 * 109.46477 * 119.99697 * 2 1 3 28 28 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 29 29 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 30 30 H 1.08001 * 119.54799 * 359.97438 * 5 4 2 31 31 H 0.96998 * 119.99624 * 359.97438 * 10 8 7 32 32 H 1.08996 * 113.61173 * 203.66462 * 13 11 10 33 33 H 1.08994 * 113.61579 * 334.56968 * 13 11 10 34 34 H 1.08005 * 119.99622 * 359.97438 * 17 16 14 35 35 H 1.08001 * 120.00731 * 180.27642 * 18 17 16 36 36 H 1.08002 * 120.00270 * 179.97438 * 21 19 18 37 37 H 1.07995 * 119.99203 * 180.02562 * 22 21 19 38 38 H 1.08999 * 113.61689 * 25.42525 * 23 11 10 39 39 H 1.09001 * 113.61277 * 156.33557 * 23 11 10 40 40 H 1.08001 * 120.46662 * 180.02562 * 24 7 6 41 41 H 1.08002 * 120.75802 * 180.29456 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7284 -0.0437 -2.1468 6 7 3.1727 -0.6525 -3.2246 7 6 2.8792 -1.9217 -3.4783 8 6 3.4022 -2.5653 -4.7062 9 8 3.1362 -3.7270 -4.9437 10 7 4.1729 -1.8625 -5.5597 11 6 4.6895 -2.4987 -6.7740 12 1 4.7752 -3.5814 -6.6808 13 6 3.9756 -2.0455 -8.0584 14 6 5.0190 -0.9154 -8.1426 15 1 4.7259 -0.0084 -7.6140 16 6 5.5047 -0.6451 -9.5434 17 6 5.6990 -1.6947 -10.4218 18 6 6.1390 -1.4470 -11.7084 19 6 6.3959 -0.1493 -12.1135 20 17 6.9548 0.1620 -13.7274 21 6 6.2066 0.9002 -11.2321 22 6 5.7616 0.6517 -9.9474 23 6 5.9553 -1.8262 -7.3310 24 6 2.0827 -2.6534 -2.6004 25 6 1.6048 -2.0391 -1.4538 26 1 -0.3934 0.4418 0.7650 27 1 1.7923 -0.5138 0.8901 28 1 1.5616 2.4678 -1.2086 29 1 1.5878 2.4586 1.2241 30 1 2.9878 0.9904 -1.9741 31 1 4.3848 -0.9351 -5.3703 32 1 4.0451 -2.7655 -8.8738 33 1 2.9586 -1.6911 -7.8909 34 1 5.5031 -2.7081 -10.1040 35 1 6.2865 -2.2667 -12.3960 36 1 6.4074 1.9134 -11.5477 37 1 5.6134 1.4709 -9.2595 38 1 6.5354 -1.2948 -6.5765 39 1 6.5650 -2.4863 -7.9479 40 1 1.8451 -3.6863 -2.8080 41 1 0.9890 -2.5820 -0.7520 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:00:40 Heat of formation + Delta-G solvation = 23.856377 kcal Electronic energy + Delta-G solvation = -25858.758178 eV Core-core repulsion = 21925.007592 eV Total energy + Delta-G solvation = -3933.750587 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.092 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.00055 -41.27879 -40.16660 -38.89727 -37.94643 -37.35295 -34.82452 -33.70705 -33.02815 -32.06786 -31.47717 -28.02464 -26.70441 -26.06454 -25.00451 -24.09553 -23.65574 -22.54469 -21.96921 -20.18700 -19.35037 -18.65068 -18.30064 -18.06917 -17.06636 -16.88461 -16.54457 -16.42447 -16.29956 -16.08509 -15.56760 -15.37414 -15.29039 -14.81624 -14.64680 -14.53621 -14.38028 -14.21802 -14.01515 -13.96027 -13.60905 -13.46795 -13.25362 -12.61271 -12.55100 -12.44138 -12.11741 -12.01461 -11.75442 -11.61309 -11.48182 -11.22588 -11.08443 -10.80956 -10.56958 -10.30872 -10.07004 -9.99662 -9.49206 -4.93074 -0.60114 0.07902 0.12720 0.32669 1.16877 1.23831 1.52129 1.60931 1.90858 1.96066 2.59279 2.62778 2.91932 3.25949 3.44502 3.61299 3.64687 3.67256 3.72758 3.79688 3.85364 3.90847 3.95392 3.96473 4.19004 4.21202 4.36858 4.38813 4.43914 4.58009 4.61206 4.73536 4.78411 4.80793 4.90165 4.91299 4.99459 5.02225 5.05404 5.13968 5.26360 5.27963 5.37189 5.48659 5.65046 5.84548 6.26251 6.54063 6.60586 7.03469 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.083 4.083 3 Si 0.762 3.238 4 C -0.104 4.104 5 C 0.100 3.900 6 N -0.457 5.457 7 C 0.061 3.939 8 C 0.573 3.427 9 O -0.565 6.565 10 N -0.682 5.682 11 C 0.111 3.889 12 H 0.093 0.907 13 C -0.142 4.142 14 C -0.067 4.067 15 H 0.111 0.889 16 C -0.067 4.067 17 C -0.107 4.107 18 C -0.118 4.118 19 C -0.056 4.056 20 Cl -0.083 7.083 21 C -0.118 4.118 22 C -0.107 4.107 23 C -0.122 4.122 24 C -0.116 4.116 25 C -0.055 4.055 26 H 0.400 0.600 27 H 0.110 0.890 28 H -0.293 1.293 29 H -0.282 1.282 30 H 0.186 0.814 31 H 0.420 0.580 32 H 0.103 0.897 33 H 0.064 0.936 34 H 0.148 0.852 35 H 0.140 0.860 36 H 0.140 0.860 37 H 0.150 0.850 38 H 0.088 0.912 39 H 0.107 0.893 40 H 0.150 0.850 41 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.980 2.927 6.265 7.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.192 4.192 3 Si 0.667 3.333 4 C -0.106 4.106 5 C -0.059 4.059 6 N -0.168 5.168 7 C -0.076 4.076 8 C 0.359 3.641 9 O -0.443 6.443 10 N -0.333 5.333 11 C 0.006 3.994 12 H 0.111 0.889 13 C -0.181 4.181 14 C -0.085 4.085 15 H 0.129 0.871 16 C -0.067 4.067 17 C -0.125 4.125 18 C -0.136 4.136 19 C -0.082 4.082 20 Cl -0.054 7.054 21 C -0.137 4.137 22 C -0.125 4.125 23 C -0.160 4.160 24 C -0.137 4.137 25 C -0.081 4.081 26 H 0.251 0.749 27 H 0.128 0.872 28 H -0.220 1.220 29 H -0.209 1.209 30 H 0.202 0.798 31 H 0.258 0.742 32 H 0.121 0.879 33 H 0.083 0.917 34 H 0.166 0.834 35 H 0.158 0.842 36 H 0.158 0.842 37 H 0.167 0.833 38 H 0.107 0.893 39 H 0.125 0.875 40 H 0.168 0.832 41 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 2.283 3.074 4.759 6.108 hybrid contribution -1.704 -0.162 0.721 1.857 sum 0.579 2.912 5.480 6.233 Atomic orbital electron populations 1.86530 1.17975 1.80834 1.51443 1.24932 0.84512 1.12025 0.97715 0.94222 0.90084 0.71829 0.77202 1.20802 0.97706 0.95044 0.97073 1.22938 0.94115 1.00429 0.88453 1.67505 1.20843 1.08646 1.19796 1.21085 0.99086 0.91359 0.96076 1.18038 0.78334 0.85237 0.82535 1.90789 1.59798 1.17666 1.76068 1.45459 1.49882 1.16324 1.21589 1.21980 0.95670 0.98310 0.83475 0.88884 1.23619 0.98464 0.98291 0.97701 1.21659 0.96547 0.98640 0.91654 0.87125 1.19959 0.97834 0.93097 0.95857 1.21209 0.98691 1.00397 0.92214 1.21257 0.99710 0.95196 0.97463 1.21172 1.04347 0.95774 0.86913 1.98381 1.88103 1.96153 1.22788 1.21272 0.99888 0.98932 0.93582 1.21299 0.98430 0.97399 0.95353 1.23372 0.95266 0.98179 0.99143 1.22284 0.95436 1.02207 0.93738 1.21736 0.96015 0.94107 0.96193 0.74864 0.87220 1.22010 1.20897 0.79798 0.74167 0.87862 0.91696 0.83396 0.84233 0.84218 0.83252 0.89292 0.87467 0.83185 0.82104 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.33 12.76 -148.98 -1.90 -0.57 16 2 C -0.08 0.46 2.82 71.24 0.20 0.66 16 3 Si 0.76 -4.99 29.82 68.60 2.05 -2.95 16 4 C -0.10 0.15 5.44 -19.70 -0.11 0.04 16 5 C 0.10 -0.12 9.84 84.81 0.83 0.72 16 6 N -0.46 -0.94 9.54 -184.92 -1.76 -2.70 16 7 C 0.06 0.28 6.75 41.91 0.28 0.57 16 8 C 0.57 3.78 7.81 86.88 0.68 4.46 16 9 O -0.56 -7.37 15.94 -3.76 -0.06 -7.43 16 10 N -0.68 -0.50 5.25 -442.60 -2.32 -2.83 16 11 C 0.11 -0.12 4.30 45.52 0.20 0.07 16 12 H 0.09 0.20 7.50 -2.38 -0.02 0.19 16 13 C -0.14 0.33 7.27 31.21 0.23 0.56 16 14 C -0.07 0.32 3.87 -10.92 -0.04 0.28 16 15 H 0.11 -0.71 8.09 -2.39 -0.02 -0.73 16 16 C -0.07 0.15 5.29 -19.86 -0.11 0.04 16 17 C -0.11 0.17 8.60 22.26 0.19 0.36 16 18 C -0.12 -0.11 9.83 22.29 0.22 0.11 16 19 C -0.06 -0.16 6.32 22.32 0.14 -0.02 16 20 Cl -0.08 -0.36 28.96 -2.72 -0.08 -0.44 16 21 C -0.12 -0.10 9.83 22.29 0.22 0.12 16 22 C -0.11 0.17 9.71 22.26 0.22 0.39 16 23 C -0.12 0.66 7.29 31.12 0.23 0.89 16 24 C -0.12 -0.35 9.63 22.61 0.22 -0.14 16 25 C -0.05 0.01 9.77 22.45 0.22 0.23 16 26 H 0.40 -4.08 8.74 -74.06 -0.65 -4.72 16 27 H 0.11 -1.12 7.96 -2.38 -0.02 -1.14 16 28 H -0.29 -0.21 7.11 99.48 0.71 0.50 16 29 H -0.28 0.56 7.11 99.48 0.71 1.27 16 30 H 0.19 -1.19 4.89 -2.91 -0.01 -1.21 16 31 H 0.42 -1.09 8.03 -92.71 -0.74 -1.84 16 32 H 0.10 -0.37 6.33 -2.39 -0.02 -0.39 16 33 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 34 H 0.15 -0.78 6.68 -2.91 -0.02 -0.80 16 35 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 36 H 0.14 -0.18 8.06 -2.91 -0.02 -0.20 16 37 H 0.15 -0.87 8.05 -2.91 -0.02 -0.90 16 38 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 39 H 0.11 -0.68 7.71 -2.39 -0.02 -0.70 16 40 H 0.15 0.43 7.64 -2.91 -0.02 0.41 16 41 H 0.16 -0.61 8.06 -2.91 -0.02 -0.64 16 Total: 0.00 -18.73 362.93 -0.52 -19.25 By element: Atomic # 1 Polarization: -11.42 SS G_CDS: -0.26 Total: -11.67 kcal Atomic # 6 Polarization: 5.53 SS G_CDS: 3.82 Total: 9.34 kcal Atomic # 7 Polarization: -1.44 SS G_CDS: -4.09 Total: -5.53 kcal Atomic # 8 Polarization: -6.04 SS G_CDS: -1.96 Total: -8.00 kcal Atomic # 14 Polarization: -4.99 SS G_CDS: 2.05 Total: -2.95 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -0.08 Total: -0.44 kcal Total: -18.73 -0.52 -19.25 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.107 kcal (2) G-P(sol) polarization free energy of solvation -18.726 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.524 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.250 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.856 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds