Wall clock time and date at job start Mon Mar 8 2021 05:00:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34655 * 124.85508 * 2 1 4 4 C 1.36772 * 108.40064 * 180.24562 * 3 2 1 5 5 C 1.47261 * 126.94430 * 179.79224 * 4 3 2 6 6 O 1.21628 * 120.00115 * 179.97438 * 5 4 3 7 7 N 1.34773 * 120.00141 * 359.96982 * 5 4 3 8 8 C 1.46497 * 120.00301 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.84913 * 23.80991 * 8 7 5 10 10 C 1.53788 * 113.61462 * 155.00192 * 8 7 5 11 11 C 1.53782 * 87.08063 * 89.12111 * 10 8 7 12 12 H 1.08999 * 113.60890 * 270.88566 * 11 10 8 13 13 C 1.50689 * 113.61422 * 139.98219 * 11 10 8 14 14 C 1.38246 * 119.98633 * 299.72432 * 13 11 10 15 15 C 1.38220 * 120.00975 * 179.73059 * 14 13 11 16 16 C 1.38351 * 119.98882 * 0.54105 * 15 14 13 17 17 Cl 1.73591 * 120.01364 * 179.74935 * 16 15 14 18 18 C 1.38357 * 119.97149 * 359.73686 * 16 15 14 19 19 C 1.38213 * 119.98726 * 359.97438 * 18 16 15 20 20 C 1.53778 * 113.61897 * 252.50273 * 8 7 5 21 21 C 1.46692 * 106.11383 * 359.76887 * 4 3 2 22 22 C 1.34487 * 106.32970 * 0.02562 * 21 4 3 23 23 C 1.50703 * 125.56983 * 179.97438 * 22 21 4 24 24 O 1.42896 * 109.47055 * 150.02473 * 23 22 21 25 25 Si 1.86304 * 109.46911 * 30.02365 * 23 22 21 26 26 H 1.09002 * 109.46798 * 270.15988 * 1 2 3 27 27 H 1.09000 * 109.47005 * 30.15980 * 1 2 3 28 28 H 1.08998 * 109.47034 * 150.15648 * 1 2 3 29 29 H 1.08001 * 125.80182 * 0.03682 * 3 2 1 30 30 H 0.97001 * 120.00006 * 0.02562 * 7 5 4 31 31 H 1.09002 * 113.60895 * 203.66806 * 10 8 7 32 32 H 1.08997 * 113.61321 * 334.56821 * 10 8 7 33 33 H 1.07992 * 119.99276 * 359.97438 * 14 13 11 34 34 H 1.08006 * 120.00417 * 180.27081 * 15 14 13 35 35 H 1.08003 * 120.00394 * 180.02562 * 18 16 15 36 36 H 1.07998 * 119.99134 * 179.97438 * 19 18 16 37 37 H 1.09000 * 113.61042 * 25.42455 * 20 8 7 38 38 H 1.08996 * 113.61963 * 156.33609 * 20 8 7 39 39 H 1.07989 * 126.83358 * 180.02562 * 21 4 3 40 40 H 1.09002 * 109.47152 * 270.02281 * 23 22 21 41 41 H 0.96708 * 114.00101 * 299.99358 * 24 23 22 42 42 H 1.48501 * 109.99652 * 179.97438 * 25 23 22 43 43 H 1.48494 * 110.00064 * 301.31786 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2346 1.1050 0.0000 4 6 3.5463 0.7176 -0.0056 5 6 4.7285 1.5956 -0.0118 6 8 5.8447 1.1126 -0.0159 7 7 4.5735 2.9344 -0.0131 8 6 5.7496 3.8079 -0.0188 9 1 6.6358 3.3220 -0.4270 10 6 5.4804 5.1997 -0.6152 11 6 5.0900 5.6457 0.8038 12 1 4.0346 5.4981 1.0329 13 6 5.5800 7.0257 1.1590 14 6 6.9351 7.2997 1.1561 15 6 7.3848 8.5668 1.4765 16 6 6.4793 9.5579 1.8110 17 17 7.0438 11.1478 2.2197 18 6 5.1237 9.2815 1.8193 19 6 4.6748 8.0157 1.4930 20 6 5.9967 4.5173 1.3231 21 6 3.5376 -0.7493 -0.0034 22 6 2.2447 -1.1198 0.0025 23 6 1.7397 -2.5397 0.0061 24 8 0.4834 -2.5966 0.6848 25 14 2.9683 -3.6335 0.8808 26 1 -0.3633 0.0029 1.0277 27 1 -0.3633 0.8886 -0.5163 28 1 -0.3633 -0.8914 -0.5114 29 1 1.8768 2.1240 0.0006 30 1 3.6833 3.3196 -0.0095 31 1 6.3751 5.6916 -0.9968 32 1 4.6513 5.2186 -1.3225 33 1 7.6420 6.5247 0.8997 34 1 8.4432 8.7820 1.4699 35 1 4.4163 10.0549 2.0799 36 1 3.6166 7.7997 1.4999 37 1 5.5842 3.9854 2.1804 38 1 7.0324 4.8227 1.4713 39 1 4.3980 -1.4018 -0.0061 40 1 1.6139 -2.8831 -1.0207 41 1 0.5204 -2.3047 1.6060 42 1 2.4815 -5.0364 0.8917 43 1 4.2876 -3.5583 0.2034 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:00:44 Heat of formation + Delta-G solvation = 33.432198 kcal Electronic energy + Delta-G solvation = -26657.686164 eV Core-core repulsion = 22697.039338 eV Total energy + Delta-G solvation = -3960.646827 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.46489 -41.43508 -40.11910 -38.76566 -37.71693 -37.33197 -34.54692 -33.67385 -32.06487 -31.80665 -31.00177 -27.65696 -26.65871 -26.50034 -25.78823 -24.07303 -23.60557 -22.45268 -21.09649 -20.60754 -20.07324 -19.02069 -18.27402 -17.33120 -17.21293 -16.80633 -16.72978 -16.44900 -16.27155 -15.84383 -15.46255 -15.36225 -15.23596 -15.08682 -14.73323 -14.62415 -14.48486 -14.29289 -14.07512 -13.60836 -13.48395 -13.37649 -13.23113 -13.21651 -13.02920 -12.58779 -12.40950 -12.19538 -12.09424 -11.97855 -11.72606 -11.55664 -11.18332 -11.03043 -10.74193 -10.09789 -9.98666 -9.57694 -9.47298 -9.20753 -4.99844 0.14159 0.34027 0.74582 1.03513 1.18077 1.39812 1.62924 1.89132 2.05266 2.26005 2.53610 2.61591 3.35265 3.50092 3.56230 3.70146 3.76011 3.87206 3.88227 3.96573 3.98345 4.02011 4.24402 4.32725 4.38388 4.38569 4.45316 4.46172 4.55695 4.68834 4.75218 4.80711 4.81674 4.89657 4.93101 4.94869 5.00422 5.06077 5.08855 5.20792 5.28935 5.29820 5.55734 5.63256 5.71701 5.86385 5.96873 6.25394 6.62911 6.66443 7.35862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.421 5.421 3 C 0.079 3.921 4 C -0.262 4.262 5 C 0.590 3.410 6 O -0.598 6.598 7 N -0.696 5.696 8 C 0.114 3.886 9 H 0.079 0.921 10 C -0.124 4.124 11 C -0.062 4.062 12 H 0.120 0.880 13 C -0.067 4.067 14 C -0.109 4.109 15 C -0.119 4.119 16 C -0.056 4.056 17 Cl -0.084 7.084 18 C -0.118 4.118 19 C -0.104 4.104 20 C -0.143 4.143 21 C -0.169 4.169 22 C -0.014 4.014 23 C -0.033 4.033 24 O -0.546 6.546 25 Si 0.783 3.217 26 H 0.097 0.903 27 H 0.102 0.898 28 H 0.091 0.909 29 H 0.213 0.787 30 H 0.415 0.585 31 H 0.098 0.902 32 H 0.090 0.910 33 H 0.144 0.856 34 H 0.137 0.863 35 H 0.141 0.859 36 H 0.155 0.845 37 H 0.069 0.931 38 H 0.095 0.905 39 H 0.129 0.871 40 H 0.115 0.885 41 H 0.396 0.604 42 H -0.285 1.285 43 H -0.300 1.300 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.717 1.893 1.645 9.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.095 5.095 3 C -0.059 4.059 4 C -0.272 4.272 5 C 0.380 3.620 6 O -0.480 6.480 7 N -0.347 5.347 8 C 0.008 3.992 9 H 0.097 0.903 10 C -0.162 4.162 11 C -0.080 4.080 12 H 0.138 0.862 13 C -0.068 4.068 14 C -0.127 4.127 15 C -0.138 4.138 16 C -0.082 4.082 17 Cl -0.055 7.055 18 C -0.137 4.137 19 C -0.122 4.122 20 C -0.182 4.182 21 C -0.193 4.193 22 C -0.124 4.124 23 C -0.144 4.144 24 O -0.354 6.354 25 Si 0.689 3.311 26 H 0.115 0.885 27 H 0.121 0.879 28 H 0.109 0.891 29 H 0.229 0.771 30 H 0.252 0.748 31 H 0.117 0.883 32 H 0.109 0.891 33 H 0.162 0.838 34 H 0.155 0.845 35 H 0.159 0.841 36 H 0.172 0.828 37 H 0.088 0.912 38 H 0.113 0.887 39 H 0.147 0.853 40 H 0.132 0.868 41 H 0.246 0.754 42 H -0.212 1.212 43 H -0.227 1.227 Dipole moment (debyes) X Y Z Total from point charges -7.949 0.765 1.045 8.054 hybrid contribution 0.191 0.618 -0.540 0.842 sum -7.758 1.383 0.505 7.896 Atomic orbital electron populations 1.22500 0.74072 1.05762 1.05473 1.43722 1.08187 1.04338 1.53249 1.22419 0.88680 0.93332 1.01433 1.20267 0.92444 0.93501 1.20943 1.17703 0.87753 0.82224 0.74292 1.90756 1.27997 1.76238 1.52987 1.45298 1.09899 1.04440 1.75084 1.21821 0.89225 0.90389 0.97722 0.90281 1.23376 1.03568 0.93120 0.96142 1.21607 1.00804 0.89167 0.96384 0.86212 1.19991 0.93150 0.95855 0.97772 1.21206 0.96143 0.95994 0.99397 1.21241 1.00105 0.92634 0.99832 1.21174 0.94952 0.86879 1.05246 1.98380 1.89731 1.25103 1.92311 1.21294 0.93481 0.98601 1.00323 1.21317 1.01158 0.91454 0.98259 1.23565 1.01035 0.96248 0.97345 1.21722 0.95450 0.93946 1.08185 1.20770 0.90049 0.89996 1.11594 1.24632 0.93867 0.94064 1.01861 1.86457 1.28917 1.89502 1.30486 0.93267 0.73559 0.75453 0.88865 0.88475 0.87936 0.89065 0.77053 0.74793 0.88329 0.89131 0.83818 0.84510 0.84127 0.82766 0.91249 0.88681 0.85285 0.86814 0.75367 1.21232 1.22743 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.68 9.81 127.77 1.25 0.58 16 2 N -0.42 1.99 3.09 -533.23 -1.65 0.34 16 3 C 0.08 -0.39 10.83 83.92 0.91 0.51 16 4 C -0.26 -0.96 6.29 -19.04 -0.12 -1.08 16 5 C 0.59 4.30 7.81 86.62 0.68 4.98 16 6 O -0.60 -10.63 16.57 -4.12 -0.07 -10.70 16 7 N -0.70 1.16 5.25 -443.46 -2.33 -1.17 16 8 C 0.11 -0.14 4.32 45.52 0.20 0.06 16 9 H 0.08 0.37 7.46 -2.39 -0.02 0.36 16 10 C -0.12 0.77 7.29 31.12 0.23 1.00 16 11 C -0.06 0.42 3.86 -11.01 -0.04 0.38 16 12 H 0.12 -1.28 8.10 -2.39 -0.02 -1.30 16 13 C -0.07 0.24 5.29 -19.86 -0.11 0.13 16 14 C -0.11 0.20 8.62 22.27 0.19 0.39 16 15 C -0.12 -0.09 9.83 22.29 0.22 0.13 16 16 C -0.06 -0.13 6.32 22.32 0.14 0.01 16 17 Cl -0.08 -0.33 28.96 -2.72 -0.08 -0.41 16 18 C -0.12 0.05 9.83 22.29 0.22 0.27 16 19 C -0.10 0.37 9.71 22.26 0.22 0.59 16 20 C -0.14 0.45 7.25 31.12 0.23 0.67 16 21 C -0.17 -0.98 9.49 23.62 0.22 -0.76 16 22 C -0.01 0.00 6.13 40.98 0.25 0.25 16 23 C -0.03 0.08 2.86 71.24 0.20 0.28 16 24 O -0.55 2.96 10.33 -148.98 -1.54 1.42 16 25 Si 0.78 -0.68 31.30 68.60 2.15 1.47 16 26 H 0.10 -1.38 8.14 -2.39 -0.02 -1.40 16 27 H 0.10 -1.50 8.13 -2.39 -0.02 -1.52 16 28 H 0.09 -0.77 6.74 -2.39 -0.02 -0.79 16 29 H 0.21 -3.06 7.45 -2.91 -0.02 -3.08 16 30 H 0.41 -3.87 7.64 -92.71 -0.71 -4.58 16 31 H 0.10 -0.56 7.73 -2.39 -0.02 -0.58 16 32 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 33 H 0.14 -0.66 6.64 -2.91 -0.02 -0.68 16 34 H 0.14 -0.12 8.06 -2.91 -0.02 -0.14 16 35 H 0.14 -0.38 8.06 -2.91 -0.02 -0.41 16 36 H 0.15 -1.35 8.06 -2.91 -0.02 -1.38 16 37 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 38 H 0.09 -0.29 6.29 -2.39 -0.02 -0.31 16 39 H 0.13 1.21 6.67 -2.92 -0.02 1.19 16 40 H 0.11 -0.15 7.96 -2.39 -0.02 -0.17 16 41 H 0.40 -4.99 8.70 -74.05 -0.64 -5.64 16 42 H -0.29 -1.31 7.11 99.48 0.71 -0.61 16 43 H -0.30 -2.15 6.77 99.48 0.67 -1.47 16 Total: 0.00 -25.13 373.05 1.09 -24.04 By element: Atomic # 1 Polarization: -23.09 SS G_CDS: -0.29 Total: -23.37 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: 4.89 Total: 8.38 kcal Atomic # 7 Polarization: 3.14 SS G_CDS: -3.97 Total: -0.83 kcal Atomic # 8 Polarization: -7.68 SS G_CDS: -1.61 Total: -9.28 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: 2.15 Total: 1.47 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -0.08 Total: -0.41 kcal Total: -25.13 1.09 -24.04 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.473 kcal (2) G-P(sol) polarization free energy of solvation -25.128 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.087 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.041 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.432 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds