Wall clock time and date at job start Mon Mar 8 2021 05:00:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86300 * 109.47064 * 2 1 4 4 C 1.50696 * 109.47289 * 119.99473 * 2 1 3 5 5 C 1.34845 * 125.90552 * 218.20700 * 4 2 1 6 6 C 1.40942 * 107.47286 * 179.97438 * 5 4 2 7 7 C 1.34853 * 107.46478 * 359.75183 * 6 5 4 8 8 N 1.36569 * 108.19935 * 0.39398 * 7 6 5 9 9 C 1.40198 * 125.66522 * 179.86164 * 8 7 6 10 10 C 1.38819 * 120.06411 * 56.08090 * 9 8 7 11 11 C 1.38132 * 119.93191 * 179.97438 * 10 9 8 12 12 C 1.38277 * 120.06605 * 359.97438 * 11 10 9 13 13 C 1.50699 * 119.93361 * 179.97438 * 12 11 10 14 14 C 1.50703 * 109.47134 * 90.00287 * 13 12 11 15 15 O 1.21278 * 119.99852 * 359.97438 * 14 13 12 16 16 N 1.34771 * 119.99793 * 180.02562 * 14 13 12 17 17 C 1.46503 * 119.99648 * 179.97438 * 16 14 13 18 18 H 1.08999 * 112.85371 * 336.19619 * 17 16 14 19 19 C 1.53783 * 113.61478 * 107.50019 * 17 16 14 20 20 C 1.53785 * 87.07887 * 89.11692 * 19 17 16 21 21 H 1.09004 * 113.68995 * 270.87508 * 20 19 17 22 22 C 1.50700 * 113.61574 * 139.98631 * 20 19 17 23 23 C 1.38247 * 119.98198 * 322.22477 * 22 20 19 24 24 C 1.38215 * 120.00954 * 179.76804 * 23 22 20 25 25 C 1.38345 * 119.98821 * 0.48888 * 24 23 22 26 26 Cl 1.73603 * 120.01512 * 179.74672 * 25 24 23 27 27 C 1.38349 * 119.97355 * 359.76358 * 25 24 23 28 28 C 1.38220 * 119.98804 * 0.02562 * 27 25 24 29 29 C 1.53780 * 113.61636 * 204.99921 * 17 16 14 30 30 C 1.38279 * 120.13215 * 0.27712 * 12 11 10 31 31 C 1.38128 * 120.06120 * 359.44926 * 30 12 11 32 32 H 0.96693 * 114.00284 * 305.22373 * 1 2 3 33 33 H 1.09006 * 109.47734 * 239.99824 * 2 1 3 34 34 H 1.48509 * 109.99931 * 299.99884 * 3 2 1 35 35 H 1.48497 * 110.00030 * 61.31508 * 3 2 1 36 36 H 1.08000 * 126.26729 * 359.97438 * 5 4 2 37 37 H 1.08001 * 126.26630 * 180.02562 * 6 5 4 38 38 H 1.08005 * 125.90040 * 180.23434 * 7 6 5 39 39 H 1.08000 * 120.03865 * 359.95292 * 10 9 8 40 40 H 1.08005 * 119.96353 * 179.97438 * 11 10 9 41 41 H 1.09008 * 109.46975 * 330.00176 * 13 12 11 42 42 H 1.09002 * 109.47049 * 210.00470 * 13 12 11 43 43 H 0.96996 * 120.00757 * 359.97438 * 16 14 13 44 44 H 1.08993 * 113.61846 * 203.66432 * 19 17 16 45 45 H 1.09005 * 113.61497 * 334.56987 * 19 17 16 46 46 H 1.08003 * 119.99219 * 0.02562 * 23 22 20 47 47 H 1.08000 * 120.00340 * 180.25009 * 24 23 22 48 48 H 1.08008 * 120.00989 * 180.02562 * 27 25 24 49 49 H 1.07994 * 119.99249 * 180.02562 * 28 27 25 50 50 H 1.09000 * 113.60977 * 25.42817 * 29 17 16 51 51 H 1.09000 * 113.61676 * 156.25309 * 29 17 16 52 52 H 1.07998 * 119.96844 * 179.70141 * 30 12 11 53 53 H 1.07999 * 120.02722 * 180.27467 * 31 30 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 3.0041 -0.3549 1.9661 6 6 3.1193 -1.2818 3.0216 7 6 2.1094 -2.1665 2.8953 8 7 1.3782 -1.8248 1.7936 9 6 0.2447 -2.5022 1.3225 10 6 -0.8462 -2.6975 2.1585 11 6 -1.9617 -3.3648 1.6913 12 6 -1.9927 -3.8375 0.3922 13 6 -3.2111 -4.5656 -0.1142 14 6 -4.1731 -3.5753 -0.7185 15 8 -3.8967 -2.3946 -0.7358 16 7 -5.3409 -4.0018 -1.2387 17 6 -6.2762 -3.0390 -1.8257 18 1 -6.1438 -2.0293 -1.4371 19 6 -6.3470 -3.1060 -3.3604 20 6 -7.4558 -4.1570 -3.1849 21 1 -7.0837 -5.1795 -3.1199 22 6 -8.5895 -4.0082 -4.1666 23 6 -9.0231 -2.7484 -4.5355 24 6 -10.0596 -2.6113 -5.4395 25 6 -10.6699 -3.7351 -5.9674 26 17 -11.9762 -3.5636 -7.0979 27 6 -10.2390 -4.9955 -5.5939 28 6 -9.1994 -5.1315 -4.6931 29 6 -7.7382 -3.5159 -1.8159 30 6 -0.9055 -3.6490 -0.4412 31 6 0.2105 -2.9775 0.0186 32 1 -0.3933 0.5095 0.7216 33 1 1.7924 -0.5139 -0.8900 34 1 1.5614 2.4679 -1.2086 35 1 1.5877 2.4586 1.2242 36 1 3.6558 0.4861 1.7806 37 1 3.8752 -1.2809 3.7930 38 1 1.9141 -3.0025 3.5507 39 1 -0.8226 -2.3285 3.1732 40 1 -2.8106 -3.5174 2.3414 41 1 -3.6952 -5.0835 0.7139 42 1 -2.9125 -5.2906 -0.8714 43 1 -5.5622 -4.9460 -1.2246 44 1 -6.6915 -2.1809 -3.8225 45 1 -5.4415 -3.4994 -3.8225 46 1 -8.5490 -1.8713 -4.1205 47 1 -10.3956 -1.6271 -5.7307 48 1 -10.7147 -5.8733 -6.0060 49 1 -8.8627 -6.1153 -4.4018 50 1 -7.9558 -4.2404 -1.0312 51 1 -8.4631 -2.7028 -1.8543 52 1 -0.9307 -4.0235 -1.4539 53 1 1.0576 -2.8267 -0.6342 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_13287746.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:00:51 Heat of formation + Delta-G solvation = 69.846797 kcal Electronic energy + Delta-G solvation = -36250.381414 eV Core-core repulsion = 31467.333843 eV Total energy + Delta-G solvation = -4783.047571 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.139 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -42.67444 -41.64341 -40.68025 -39.75410 -38.80417 -37.88101 -37.36999 -34.86361 -34.49623 -32.17311 -32.11850 -31.99690 -31.27453 -31.04465 -27.96876 -26.70836 -26.08163 -25.97014 -23.98689 -23.98000 -23.47527 -22.51649 -21.66479 -21.40609 -20.62829 -20.13598 -19.31709 -18.52517 -17.97167 -17.60498 -17.24854 -17.07738 -16.76681 -16.43526 -16.31469 -16.17970 -15.86348 -15.80739 -15.34433 -15.32384 -15.12305 -14.72130 -14.70684 -14.52194 -14.52113 -14.40550 -14.31359 -14.17457 -13.91328 -13.67794 -13.50520 -13.39437 -13.29641 -13.17395 -12.94831 -12.63893 -12.60137 -12.43701 -12.35956 -12.12181 -12.01510 -11.89765 -11.76214 -11.59878 -11.23431 -11.03608 -10.93592 -10.23444 -10.08780 -10.02094 -10.01012 -9.51287 -9.23391 -9.07820 -4.94748 -0.00183 0.10387 0.30027 0.32653 1.04811 1.14727 1.36048 1.62403 1.62692 1.81093 2.00036 2.09998 2.12237 2.57241 2.69989 3.23847 3.45949 3.60288 3.65629 3.67425 3.68827 3.75158 3.83769 3.86556 3.92666 3.95641 4.01111 4.14559 4.20217 4.23618 4.30437 4.34157 4.42150 4.45024 4.52650 4.52924 4.61845 4.64242 4.64407 4.71436 4.76371 4.81721 4.87756 4.91098 4.94504 5.01039 5.04115 5.15000 5.19336 5.20459 5.24765 5.25985 5.27178 5.36181 5.48006 5.52350 5.66501 5.78129 5.82468 5.93893 6.18886 6.34540 6.50317 6.56007 7.28271 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.065 4.065 3 Si 0.805 3.195 4 C -0.027 4.027 5 C -0.193 4.193 6 C -0.200 4.200 7 C -0.019 4.019 8 N -0.399 5.399 9 C 0.117 3.883 10 C -0.126 4.126 11 C -0.097 4.097 12 C -0.068 4.068 13 C -0.097 4.097 14 C 0.514 3.486 15 O -0.578 6.578 16 N -0.701 5.701 17 C 0.116 3.884 18 H 0.078 0.922 19 C -0.145 4.145 20 C -0.063 4.063 21 H 0.120 0.880 22 C -0.068 4.068 23 C -0.110 4.110 24 C -0.120 4.120 25 C -0.055 4.055 26 Cl -0.083 7.083 27 C -0.118 4.118 28 C -0.104 4.104 29 C -0.125 4.125 30 C -0.098 4.098 31 C -0.108 4.108 32 H 0.377 0.623 33 H 0.119 0.881 34 H -0.296 1.296 35 H -0.289 1.289 36 H 0.168 0.832 37 H 0.158 0.842 38 H 0.177 0.823 39 H 0.130 0.870 40 H 0.145 0.855 41 H 0.136 0.864 42 H 0.133 0.867 43 H 0.419 0.581 44 H 0.092 0.908 45 H 0.068 0.932 46 H 0.143 0.857 47 H 0.137 0.863 48 H 0.141 0.859 49 H 0.154 0.846 50 H 0.091 0.909 51 H 0.096 0.904 52 H 0.140 0.860 53 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.764 -6.344 2.201 6.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.173 4.173 3 Si 0.708 3.292 4 C -0.137 4.137 5 C -0.217 4.217 6 C -0.224 4.224 7 C -0.146 4.146 8 N -0.072 5.072 9 C 0.028 3.972 10 C -0.145 4.145 11 C -0.115 4.115 12 C -0.068 4.068 13 C -0.136 4.136 14 C 0.302 3.698 15 O -0.457 6.457 16 N -0.353 5.353 17 C 0.010 3.990 18 H 0.096 0.904 19 C -0.183 4.183 20 C -0.081 4.081 21 H 0.138 0.862 22 C -0.068 4.068 23 C -0.128 4.128 24 C -0.138 4.138 25 C -0.082 4.082 26 Cl -0.055 7.055 27 C -0.137 4.137 28 C -0.122 4.122 29 C -0.163 4.163 30 C -0.116 4.116 31 C -0.128 4.128 32 H 0.224 0.776 33 H 0.136 0.864 34 H -0.224 1.224 35 H -0.216 1.216 36 H 0.186 0.814 37 H 0.175 0.825 38 H 0.194 0.806 39 H 0.148 0.852 40 H 0.163 0.837 41 H 0.154 0.846 42 H 0.151 0.849 43 H 0.256 0.744 44 H 0.110 0.890 45 H 0.087 0.913 46 H 0.161 0.839 47 H 0.155 0.845 48 H 0.159 0.841 49 H 0.172 0.828 50 H 0.110 0.890 51 H 0.114 0.886 52 H 0.157 0.843 53 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 0.449 -5.206 1.460 5.425 hybrid contribution -1.442 -0.208 0.156 1.465 sum -0.994 -5.414 1.616 5.736 Atomic orbital electron populations 1.86644 1.18411 1.74962 1.54628 1.25060 0.83462 1.12317 0.96429 0.93557 0.89827 0.69630 0.76229 1.21237 0.99437 0.92230 1.00756 1.21039 0.99456 1.03583 0.97630 1.21228 1.01396 0.97629 1.02144 1.22371 0.95762 1.03865 0.92636 1.41578 1.21458 1.21553 1.22647 1.17752 0.86949 0.98080 0.94453 1.21146 0.92382 1.00788 1.00223 1.21096 0.97595 0.96927 0.95879 1.19588 0.94963 0.98554 0.93723 1.20770 0.91868 0.96890 1.04109 1.21026 0.82296 0.89375 0.77107 1.90774 1.76406 1.20033 1.58465 1.45563 1.18079 1.11579 1.60126 1.21777 0.89828 0.93660 0.93757 0.90358 1.23556 0.98811 0.99873 0.96072 1.21622 0.92586 1.00602 0.93277 0.86224 1.20000 0.96839 0.92845 0.97160 1.21193 0.96148 0.98357 0.97078 1.21238 0.96771 0.98126 0.97686 1.21167 0.93935 0.95972 0.97115 1.98382 1.48322 1.98151 1.60609 1.21301 0.97938 0.95944 0.98498 1.21320 0.95038 0.99912 0.95967 1.23364 0.94690 1.01475 0.96744 1.21068 0.92406 0.98139 1.00020 1.20995 0.99442 0.97917 0.94408 0.77565 0.86375 1.22388 1.21601 0.81438 0.82466 0.80582 0.85202 0.83722 0.84632 0.84888 0.74356 0.89010 0.91292 0.83909 0.84516 0.84111 0.82817 0.89019 0.88558 0.84253 0.86264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -4.65 11.00 -148.98 -1.64 -6.29 16 2 C -0.06 -0.27 2.49 71.23 0.18 -0.10 16 3 Si 0.80 0.90 30.80 68.60 2.11 3.01 16 4 C -0.03 -0.16 6.12 41.04 0.25 0.10 16 5 C -0.19 -0.68 9.39 22.15 0.21 -0.47 16 6 C -0.20 -0.73 10.86 22.15 0.24 -0.49 16 7 C -0.02 -0.09 11.21 83.18 0.93 0.85 16 8 N -0.40 -2.66 2.84 -333.42 -0.95 -3.60 16 9 C 0.12 0.77 4.67 38.08 0.18 0.94 16 10 C -0.13 -0.56 9.77 22.38 0.22 -0.34 16 11 C -0.10 -0.17 9.69 22.25 0.22 0.04 16 12 C -0.07 -0.06 4.38 -19.85 -0.09 -0.15 16 13 C -0.10 0.61 5.83 29.10 0.17 0.78 16 14 C 0.51 0.03 7.82 87.66 0.69 0.72 16 15 O -0.58 -6.62 15.63 -3.02 -0.05 -6.66 16 16 N -0.70 4.10 5.26 -440.04 -2.32 1.78 16 17 C 0.12 -0.39 4.32 45.52 0.20 -0.19 16 18 H 0.08 0.21 7.46 -2.39 -0.02 0.19 16 19 C -0.14 0.59 7.25 31.12 0.23 0.81 16 20 C -0.06 0.46 3.86 -11.01 -0.04 0.42 16 21 H 0.12 -1.31 8.09 -2.39 -0.02 -1.33 16 22 C -0.07 0.24 5.29 -19.86 -0.11 0.14 16 23 C -0.11 0.20 8.60 22.27 0.19 0.39 16 24 C -0.12 -0.10 9.83 22.29 0.22 0.12 16 25 C -0.06 -0.13 6.32 22.32 0.14 0.01 16 26 Cl -0.08 -0.33 28.96 -2.72 -0.08 -0.41 16 27 C -0.12 0.03 9.83 22.29 0.22 0.25 16 28 C -0.10 0.36 9.71 22.26 0.22 0.57 16 29 C -0.12 0.91 7.29 31.12 0.23 1.14 16 30 C -0.10 -0.30 9.69 22.25 0.22 -0.09 16 31 C -0.11 -0.66 8.61 22.38 0.19 -0.47 16 32 H 0.38 2.07 8.60 -74.06 -0.64 1.43 16 33 H 0.12 0.33 7.96 -2.38 -0.02 0.31 16 34 H -0.30 -2.27 7.11 99.48 0.71 -1.56 16 35 H -0.29 -1.85 7.11 99.48 0.71 -1.15 16 36 H 0.17 -0.34 6.59 -2.91 -0.02 -0.36 16 37 H 0.16 -0.06 8.06 -2.91 -0.02 -0.09 16 38 H 0.18 0.06 8.06 -2.91 -0.02 0.04 16 39 H 0.13 0.35 8.06 -2.91 -0.02 0.33 16 40 H 0.15 -0.38 8.06 -2.91 -0.02 -0.40 16 41 H 0.14 -1.63 8.08 -2.38 -0.02 -1.65 16 42 H 0.13 -1.53 8.08 -2.39 -0.02 -1.55 16 43 H 0.42 -5.39 8.70 -92.71 -0.81 -6.19 16 44 H 0.09 -0.31 6.32 -2.39 -0.02 -0.32 16 45 H 0.07 -0.16 8.14 -2.38 -0.02 -0.18 16 46 H 0.14 -0.66 6.67 -2.91 -0.02 -0.68 16 47 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 48 H 0.14 -0.35 8.06 -2.91 -0.02 -0.38 16 49 H 0.15 -1.30 8.05 -2.91 -0.02 -1.32 16 50 H 0.09 -0.87 8.14 -2.39 -0.02 -0.88 16 51 H 0.10 -0.61 7.72 -2.39 -0.02 -0.63 16 52 H 0.14 -0.08 8.06 -2.91 -0.02 -0.10 16 53 H 0.12 0.71 8.06 -2.91 -0.02 0.68 16 Total: 0.00 -24.84 454.63 1.73 -23.11 By element: Atomic # 1 Polarization: -15.48 SS G_CDS: -0.45 Total: -15.92 kcal Atomic # 6 Polarization: -0.10 SS G_CDS: 5.09 Total: 4.99 kcal Atomic # 7 Polarization: 1.44 SS G_CDS: -3.26 Total: -1.82 kcal Atomic # 8 Polarization: -11.27 SS G_CDS: -1.69 Total: -12.96 kcal Atomic # 14 Polarization: 0.90 SS G_CDS: 2.11 Total: 3.01 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -0.08 Total: -0.41 kcal Total: -24.84 1.73 -23.11 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_13287746.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.956 kcal (2) G-P(sol) polarization free energy of solvation -24.836 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.120 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.727 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.109 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.847 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds