Wall clock time and date at job start Mon Mar 8 2021 05:01:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36419 * 125.80362 * 2 1 4 4 C 1.47381 * 127.18837 * 359.97438 * 3 2 1 5 5 O 1.21612 * 120.00070 * 0.02562 * 4 3 2 6 6 N 1.34778 * 119.99699 * 179.97438 * 4 3 2 7 7 C 1.46498 * 119.99736 * 180.02562 * 6 4 3 8 8 H 1.09008 * 112.84957 * 336.19146 * 7 6 4 9 9 C 1.53780 * 113.61908 * 107.50335 * 7 6 4 10 10 C 1.53779 * 87.07849 * 89.11520 * 9 7 6 11 11 H 1.09004 * 113.61388 * 270.88320 * 10 9 7 12 12 C 1.50702 * 113.68788 * 139.99853 * 10 9 7 13 13 C 1.38234 * 119.98701 * 322.18431 * 12 10 9 14 14 C 1.38212 * 120.01514 * 179.77100 * 13 12 10 15 15 C 1.38353 * 119.98620 * 0.53277 * 14 13 12 16 16 Cl 1.73598 * 120.01661 * 179.70375 * 15 14 13 17 17 C 1.38351 * 119.97276 * 359.72027 * 15 14 13 18 18 C 1.38223 * 119.98624 * 0.02562 * 17 15 14 19 19 C 1.53777 * 113.61237 * 205.00377 * 7 6 4 20 20 C 1.47017 * 105.61674 * 179.76204 * 3 2 1 21 21 C 1.34179 * 105.95584 * 0.38575 * 20 3 2 22 22 C 1.50702 * 125.43900 * 179.87313 * 21 20 3 23 23 O 1.42892 * 109.47242 * 64.71835 * 22 21 20 24 24 Si 1.86298 * 109.46915 * 184.72373 * 22 21 20 25 25 O 1.33656 * 125.80169 * 179.97438 * 2 1 3 26 26 H 1.09006 * 109.46838 * 179.97438 * 1 2 3 27 27 H 1.08990 * 109.47498 * 299.97416 * 1 2 3 28 28 H 1.09005 * 109.46897 * 59.98105 * 1 2 3 29 29 H 0.96997 * 120.00318 * 0.02562 * 6 4 3 30 30 H 1.08995 * 113.61694 * 203.66627 * 9 7 6 31 31 H 1.09005 * 113.60785 * 334.56905 * 9 7 6 32 32 H 1.08004 * 119.99366 * 0.02562 * 13 12 10 33 33 H 1.08007 * 120.00925 * 180.25049 * 14 13 12 34 34 H 1.07998 * 120.01042 * 180.02562 * 17 15 14 35 35 H 1.07996 * 119.99461 * 179.97438 * 18 17 15 36 36 H 1.08995 * 113.61918 * 25.42841 * 19 7 6 37 37 H 1.09008 * 113.61591 * 156.33657 * 19 7 6 38 38 H 1.08001 * 127.02268 * 180.25720 * 20 3 2 39 39 H 1.09000 * 109.46724 * 304.71880 * 22 21 20 40 40 H 0.96703 * 114.00176 * 180.02562 * 23 22 21 41 41 H 1.48506 * 109.99834 * 178.68053 * 24 22 21 42 42 H 1.48502 * 110.00011 * 299.99318 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5157 -0.0005 5 8 0.6889 2.7892 -0.0006 6 7 2.7930 3.5015 0.0001 7 6 2.3645 4.9024 0.0001 8 1 1.3620 5.0385 -0.4058 9 6 2.5889 5.6153 1.3441 10 6 3.9872 5.9875 0.8235 11 1 4.7497 5.2418 1.0487 12 6 4.4140 7.3876 1.1824 13 6 3.4897 8.4154 1.1730 14 6 3.8795 9.6988 1.5066 15 6 5.1974 9.9567 1.8392 16 17 5.6894 11.5698 2.2509 17 6 6.1232 8.9286 1.8433 18 6 5.7311 7.6446 1.5146 19 6 3.4058 5.8651 -0.5948 20 6 3.6849 0.5991 0.0059 21 6 3.5859 -0.7391 0.0001 22 6 4.7459 -1.7011 0.0003 23 8 5.4756 -1.5672 1.2215 24 14 4.1070 -3.4443 -0.1537 25 8 2.2888 -1.0840 0.0005 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5134 0.8901 28 1 -0.3633 0.5142 -0.8899 29 1 3.7382 3.2835 0.0005 30 1 1.9366 6.4751 1.4966 31 1 2.6069 4.9394 2.1991 32 1 2.4618 8.2148 0.9090 33 1 3.1563 10.5010 1.5032 34 1 7.1521 9.1293 2.1032 35 1 6.4537 6.8420 1.5173 36 1 4.0832 5.3910 -1.3050 37 1 2.9768 6.7933 -0.9724 38 1 4.5928 1.1840 0.0114 39 1 5.4021 -1.4790 -0.8413 40 1 6.2385 -2.1575 1.2907 41 1 5.2428 -4.4004 -0.1868 42 1 3.2110 -3.7594 0.9878 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9610464_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:01:01 Heat of formation + Delta-G solvation = -4.982444 kcal Electronic energy + Delta-G solvation = -26879.927355 eV Core-core repulsion = 22819.896082 eV Total energy + Delta-G solvation = -4060.031273 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.096 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -43.71652 -41.59139 -40.21822 -38.85293 -38.16482 -37.30834 -34.67304 -33.91472 -33.18239 -32.13842 -31.52828 -29.49504 -26.82949 -26.61969 -25.58086 -24.30506 -23.82292 -22.72917 -22.10120 -20.72626 -20.05986 -18.95186 -18.58874 -18.22662 -17.30947 -17.17715 -16.94317 -16.57593 -16.37463 -16.04637 -15.78989 -15.73588 -15.26667 -15.02816 -14.70641 -14.58938 -14.44949 -14.18392 -14.03016 -13.99952 -13.86807 -13.63743 -13.60024 -13.28746 -13.15650 -12.66212 -12.64024 -12.43635 -12.13383 -12.07490 -11.75910 -11.66877 -11.31925 -11.02970 -10.86115 -10.68970 -10.10568 -10.04587 -9.54427 -9.51104 -5.04805 0.08874 0.26358 0.32156 0.82401 1.07345 1.19332 1.34270 1.64807 1.89600 2.11720 2.35957 2.54029 3.14740 3.34191 3.40227 3.55018 3.59799 3.73060 3.74261 3.77960 3.86591 3.86769 4.06364 4.07033 4.16344 4.26706 4.36363 4.41077 4.53988 4.60826 4.61138 4.64387 4.67510 4.74179 4.81531 4.82007 4.91245 4.95149 5.04382 5.11060 5.20090 5.22650 5.22897 5.47730 5.58878 5.76068 5.95900 6.19530 6.49687 7.24727 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.098 3.902 3 C -0.254 4.254 4 C 0.596 3.404 5 O -0.536 6.536 6 N -0.708 5.708 7 C 0.122 3.878 8 H 0.108 0.892 9 C -0.144 4.144 10 C -0.075 4.075 11 H 0.099 0.901 12 C -0.066 4.066 13 C -0.105 4.105 14 C -0.107 4.107 15 C -0.039 4.039 16 Cl -0.070 7.070 17 C -0.108 4.108 18 C -0.104 4.104 19 C -0.135 4.135 20 C -0.146 4.146 21 C -0.008 4.008 22 C -0.037 4.037 23 O -0.534 6.534 24 Si 0.698 3.302 25 O -0.167 6.167 26 H 0.080 0.920 27 H 0.099 0.901 28 H 0.100 0.900 29 H 0.401 0.599 30 H 0.096 0.904 31 H 0.076 0.924 32 H 0.133 0.867 33 H 0.134 0.866 34 H 0.133 0.867 35 H 0.131 0.869 36 H 0.078 0.922 37 H 0.100 0.900 38 H 0.157 0.843 39 H 0.098 0.902 40 H 0.388 0.612 41 H -0.252 1.252 42 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.304 -2.951 -3.320 5.004 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.044 3.956 3 C -0.259 4.259 4 C 0.385 3.615 5 O -0.414 6.414 6 N -0.359 5.359 7 C 0.016 3.984 8 H 0.126 0.874 9 C -0.183 4.183 10 C -0.094 4.094 11 H 0.117 0.883 12 C -0.066 4.066 13 C -0.123 4.123 14 C -0.126 4.126 15 C -0.066 4.066 16 Cl -0.041 7.041 17 C -0.126 4.126 18 C -0.122 4.122 19 C -0.173 4.173 20 C -0.165 4.165 21 C -0.056 4.056 22 C -0.146 4.146 23 O -0.343 6.343 24 Si 0.597 3.403 25 O -0.064 6.064 26 H 0.099 0.901 27 H 0.117 0.883 28 H 0.118 0.882 29 H 0.236 0.764 30 H 0.115 0.885 31 H 0.094 0.906 32 H 0.151 0.849 33 H 0.152 0.848 34 H 0.151 0.849 35 H 0.149 0.851 36 H 0.097 0.903 37 H 0.118 0.882 38 H 0.175 0.825 39 H 0.115 0.885 40 H 0.238 0.762 41 H -0.176 1.176 42 H -0.175 1.175 Dipole moment (debyes) X Y Z Total from point charges 0.913 -3.260 -2.803 4.395 hybrid contribution 1.915 0.483 0.828 2.141 sum 2.828 -2.777 -1.975 4.428 Atomic orbital electron populations 1.20571 0.83177 1.04122 1.05500 1.22897 0.94055 0.82736 0.95866 1.21074 0.93196 0.93718 1.17865 1.17140 0.85371 0.83614 0.75354 1.90800 1.16475 1.84028 1.50120 1.45427 1.09667 1.05069 1.75711 1.21834 0.99771 0.79865 0.96909 0.87410 1.23582 0.95736 1.00916 0.98055 1.21626 0.97491 0.93331 0.96910 0.88297 1.19798 0.93429 0.95082 0.98317 1.20992 0.99974 0.91582 0.99711 1.21090 0.94323 0.97759 0.99387 1.20994 0.94887 0.86586 1.04094 1.98392 1.91713 1.21969 1.92060 1.21093 0.99580 0.91882 1.00093 1.21041 0.95770 0.96240 0.99155 1.23436 0.97974 1.00026 0.95880 1.22516 0.96426 0.93389 1.04215 1.20950 0.82086 0.94048 1.08528 1.23803 0.91755 1.09140 0.89919 1.86563 1.45552 1.64680 1.37466 0.94440 0.83031 0.72937 0.89925 1.83664 1.16220 1.35058 1.71444 0.90090 0.88293 0.88167 0.76414 0.88529 0.90560 0.84891 0.84810 0.84876 0.85127 0.90345 0.88195 0.82539 0.88465 0.76221 1.17640 1.17487 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.01 9.14 36.00 0.33 0.34 16 2 C 0.10 0.19 7.37 -34.97 -0.26 -0.07 16 3 C -0.25 -0.52 6.31 -103.28 -0.65 -1.17 16 4 C 0.60 1.53 7.81 -12.54 -0.10 1.43 16 5 O -0.54 -2.84 15.26 5.27 0.08 -2.76 16 6 N -0.71 0.21 5.26 -54.10 -0.28 -0.08 16 7 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 8 H 0.11 0.07 7.46 -51.92 -0.39 -0.32 16 9 C -0.14 0.18 7.26 -25.92 -0.19 -0.01 16 10 C -0.08 0.16 3.85 -90.96 -0.35 -0.19 16 11 H 0.10 -0.28 8.09 -51.93 -0.42 -0.70 16 12 C -0.07 0.05 5.29 -104.62 -0.55 -0.50 16 13 C -0.10 0.07 8.60 -39.59 -0.34 -0.27 16 14 C -0.11 -0.04 9.83 -39.55 -0.39 -0.42 16 15 C -0.04 -0.05 6.32 -39.50 -0.25 -0.30 16 16 Cl -0.07 -0.12 28.96 -51.86 -1.50 -1.62 16 17 C -0.11 -0.04 9.83 -39.55 -0.39 -0.43 16 18 C -0.10 0.05 9.71 -39.59 -0.38 -0.33 16 19 C -0.14 0.33 7.29 -25.92 -0.19 0.14 16 20 C -0.15 -0.10 10.48 -37.46 -0.39 -0.50 16 21 C -0.01 -0.01 6.22 -35.74 -0.22 -0.23 16 22 C -0.04 0.04 2.96 36.01 0.11 0.15 16 23 O -0.53 0.15 12.86 -35.23 -0.45 -0.30 16 24 Si 0.70 -0.93 32.09 -169.99 -5.46 -6.39 16 25 O -0.17 -0.32 8.90 7.64 0.07 -0.25 16 26 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.10 0.03 8.08 -51.93 -0.42 -0.39 16 28 H 0.10 -0.02 8.08 -51.93 -0.42 -0.44 16 29 H 0.40 -0.95 7.87 -40.82 -0.32 -1.27 16 30 H 0.10 -0.17 6.33 -51.93 -0.33 -0.50 16 31 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.13 -0.30 6.68 -52.48 -0.35 -0.66 16 33 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 34 H 0.13 -0.10 8.06 -52.49 -0.42 -0.53 16 35 H 0.13 -0.30 8.05 -52.49 -0.42 -0.73 16 36 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.10 -0.26 7.71 -51.92 -0.40 -0.66 16 38 H 0.16 -0.26 7.74 -52.49 -0.41 -0.67 16 39 H 0.10 -0.37 7.96 -51.93 -0.41 -0.78 16 40 H 0.39 -1.80 8.74 45.56 0.40 -1.40 16 41 H -0.25 0.04 7.11 56.52 0.40 0.45 16 42 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 LS Contribution 373.50 15.07 5.63 5.63 Total: 0.00 -7.94 373.50 -11.63 -19.57 By element: Atomic # 1 Polarization: -5.84 SS G_CDS: -5.20 Total: -11.05 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -4.51 Total: -2.76 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.28 Total: -0.08 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.30 Total: -3.31 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.46 Total: -6.39 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -1.50 Total: -1.62 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -7.94 -11.63 -19.57 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.592 kcal (2) G-P(sol) polarization free energy of solvation -7.943 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.649 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.631 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.982 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds