Wall clock time and date at job start Mon Mar 8 2021 05:01:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36419 * 125.80362 * 2 1 4 4 C 1.47381 * 127.18837 * 359.97438 * 3 2 1 5 5 O 1.21612 * 120.00070 * 0.02562 * 4 3 2 6 6 N 1.34778 * 119.99699 * 179.97438 * 4 3 2 7 7 C 1.46498 * 119.99736 * 180.02562 * 6 4 3 8 8 H 1.09008 * 112.84957 * 336.19146 * 7 6 4 9 9 C 1.53780 * 113.61908 * 107.50335 * 7 6 4 10 10 C 1.53779 * 87.07849 * 89.11520 * 9 7 6 11 11 H 1.09004 * 113.61388 * 270.88320 * 10 9 7 12 12 C 1.50702 * 113.68788 * 139.99853 * 10 9 7 13 13 C 1.38234 * 119.98701 * 322.18431 * 12 10 9 14 14 C 1.38212 * 120.01514 * 179.77100 * 13 12 10 15 15 C 1.38353 * 119.98620 * 0.53277 * 14 13 12 16 16 Cl 1.73598 * 120.01661 * 179.70375 * 15 14 13 17 17 C 1.38351 * 119.97276 * 359.72027 * 15 14 13 18 18 C 1.38223 * 119.98624 * 0.02562 * 17 15 14 19 19 C 1.53777 * 113.61237 * 205.00377 * 7 6 4 20 20 C 1.47017 * 105.61674 * 179.76204 * 3 2 1 21 21 C 1.34179 * 105.95584 * 0.38575 * 20 3 2 22 22 C 1.50702 * 125.43900 * 179.87313 * 21 20 3 23 23 O 1.42892 * 109.47242 * 64.71835 * 22 21 20 24 24 Si 1.86298 * 109.46915 * 184.72373 * 22 21 20 25 25 O 1.33656 * 125.80169 * 179.97438 * 2 1 3 26 26 H 1.09006 * 109.46838 * 179.97438 * 1 2 3 27 27 H 1.08990 * 109.47498 * 299.97416 * 1 2 3 28 28 H 1.09005 * 109.46897 * 59.98105 * 1 2 3 29 29 H 0.96997 * 120.00318 * 0.02562 * 6 4 3 30 30 H 1.08995 * 113.61694 * 203.66627 * 9 7 6 31 31 H 1.09005 * 113.60785 * 334.56905 * 9 7 6 32 32 H 1.08004 * 119.99366 * 0.02562 * 13 12 10 33 33 H 1.08007 * 120.00925 * 180.25049 * 14 13 12 34 34 H 1.07998 * 120.01042 * 180.02562 * 17 15 14 35 35 H 1.07996 * 119.99461 * 179.97438 * 18 17 15 36 36 H 1.08995 * 113.61918 * 25.42841 * 19 7 6 37 37 H 1.09008 * 113.61591 * 156.33657 * 19 7 6 38 38 H 1.08001 * 127.02268 * 180.25720 * 20 3 2 39 39 H 1.09000 * 109.46724 * 304.71880 * 22 21 20 40 40 H 0.96703 * 114.00176 * 180.02562 * 23 22 21 41 41 H 1.48506 * 109.99834 * 178.68053 * 24 22 21 42 42 H 1.48502 * 110.00011 * 299.99318 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5157 -0.0005 5 8 0.6889 2.7892 -0.0006 6 7 2.7930 3.5015 0.0001 7 6 2.3645 4.9024 0.0001 8 1 1.3620 5.0385 -0.4058 9 6 2.5889 5.6153 1.3441 10 6 3.9872 5.9875 0.8235 11 1 4.7497 5.2418 1.0487 12 6 4.4140 7.3876 1.1824 13 6 3.4897 8.4154 1.1730 14 6 3.8795 9.6988 1.5066 15 6 5.1974 9.9567 1.8392 16 17 5.6894 11.5698 2.2509 17 6 6.1232 8.9286 1.8433 18 6 5.7311 7.6446 1.5146 19 6 3.4058 5.8651 -0.5948 20 6 3.6849 0.5991 0.0059 21 6 3.5859 -0.7391 0.0001 22 6 4.7459 -1.7011 0.0003 23 8 5.4756 -1.5672 1.2215 24 14 4.1070 -3.4443 -0.1537 25 8 2.2888 -1.0840 0.0005 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5134 0.8901 28 1 -0.3633 0.5142 -0.8899 29 1 3.7382 3.2835 0.0005 30 1 1.9366 6.4751 1.4966 31 1 2.6069 4.9394 2.1991 32 1 2.4618 8.2148 0.9090 33 1 3.1563 10.5010 1.5032 34 1 7.1521 9.1293 2.1032 35 1 6.4537 6.8420 1.5173 36 1 4.0832 5.3910 -1.3050 37 1 2.9768 6.7933 -0.9724 38 1 4.5928 1.1840 0.0114 39 1 5.4021 -1.4790 -0.8413 40 1 6.2385 -2.1575 1.2907 41 1 5.2428 -4.4004 -0.1868 42 1 3.2110 -3.7594 0.9878 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:01:00 Heat of formation + Delta-G solvation = -0.698294 kcal Electronic energy + Delta-G solvation = -26879.741580 eV Core-core repulsion = 22819.896082 eV Total energy + Delta-G solvation = -4059.845498 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.096 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -43.76836 -41.54788 -40.27533 -38.87465 -38.06733 -37.35850 -34.76394 -33.95186 -33.18727 -32.07906 -31.49623 -29.46364 -26.70139 -26.59131 -25.54472 -24.31523 -23.79026 -22.70855 -22.11959 -20.79309 -19.98695 -18.87190 -18.58008 -18.20889 -17.36188 -17.18836 -16.92183 -16.56470 -16.32995 -16.02262 -15.78869 -15.76056 -15.25143 -15.02798 -14.70918 -14.56380 -14.37887 -14.18802 -14.05364 -13.98583 -13.86975 -13.60488 -13.47185 -13.24768 -13.11903 -12.65775 -12.61156 -12.44154 -12.17376 -12.00932 -11.75182 -11.60076 -11.23384 -11.16741 -10.93769 -10.61961 -10.12411 -10.01091 -9.57662 -9.49762 -4.94906 0.11587 0.22011 0.31508 0.80905 1.15997 1.16623 1.36826 1.68459 1.94307 2.10471 2.23587 2.58660 3.21634 3.45457 3.53125 3.65742 3.67385 3.73647 3.77078 3.85060 3.94259 3.97468 4.12476 4.20212 4.29033 4.35723 4.43054 4.46355 4.60264 4.61945 4.67132 4.72595 4.76704 4.78230 4.88390 4.90533 5.02095 5.04596 5.12204 5.15650 5.22034 5.25864 5.27022 5.51469 5.65622 5.83532 5.91212 6.48371 6.52436 7.16032 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.084 3.916 3 C -0.268 4.268 4 C 0.592 3.408 5 O -0.572 6.572 6 N -0.694 5.694 7 C 0.116 3.884 8 H 0.091 0.909 9 C -0.143 4.143 10 C -0.066 4.066 11 H 0.112 0.888 12 C -0.068 4.068 13 C -0.108 4.108 14 C -0.118 4.118 15 C -0.056 4.056 16 Cl -0.083 7.083 17 C -0.118 4.118 18 C -0.107 4.107 19 C -0.123 4.123 20 C -0.144 4.144 21 C -0.024 4.024 22 C -0.036 4.036 23 O -0.554 6.554 24 Si 0.760 3.240 25 O -0.176 6.176 26 H 0.096 0.904 27 H 0.092 0.908 28 H 0.100 0.900 29 H 0.413 0.587 30 H 0.100 0.900 31 H 0.064 0.936 32 H 0.148 0.852 33 H 0.139 0.861 34 H 0.140 0.860 35 H 0.150 0.850 36 H 0.088 0.912 37 H 0.104 0.896 38 H 0.181 0.819 39 H 0.133 0.867 40 H 0.406 0.594 41 H -0.263 1.263 42 H -0.313 1.313 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.722 -3.272 -4.098 6.431 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.030 3.970 3 C -0.273 4.273 4 C 0.381 3.619 5 O -0.453 6.453 6 N -0.345 5.345 7 C 0.011 3.989 8 H 0.109 0.891 9 C -0.182 4.182 10 C -0.084 4.084 11 H 0.130 0.870 12 C -0.068 4.068 13 C -0.126 4.126 14 C -0.136 4.136 15 C -0.082 4.082 16 Cl -0.054 7.054 17 C -0.137 4.137 18 C -0.125 4.125 19 C -0.161 4.161 20 C -0.163 4.163 21 C -0.072 4.072 22 C -0.145 4.145 23 O -0.366 6.366 24 Si 0.665 3.335 25 O -0.074 6.074 26 H 0.115 0.885 27 H 0.110 0.890 28 H 0.118 0.882 29 H 0.250 0.750 30 H 0.119 0.881 31 H 0.083 0.917 32 H 0.165 0.835 33 H 0.157 0.843 34 H 0.158 0.842 35 H 0.168 0.832 36 H 0.107 0.893 37 H 0.122 0.878 38 H 0.198 0.802 39 H 0.151 0.849 40 H 0.259 0.741 41 H -0.188 1.188 42 H -0.241 1.241 Dipole moment (debyes) X Y Z Total from point charges 2.391 -3.574 -3.603 5.610 hybrid contribution 1.448 0.532 1.132 1.914 sum 3.839 -3.042 -2.470 5.486 Atomic orbital electron populations 1.20583 0.82434 1.05046 1.05100 1.23245 0.94825 0.82948 0.95975 1.21210 0.94195 0.93502 1.18349 1.17307 0.85225 0.84265 0.75062 1.90776 1.17931 1.84545 1.52038 1.45337 1.09928 1.04859 1.74406 1.21875 0.99633 0.79815 0.97601 0.89112 1.23575 0.96615 1.00752 0.97256 1.21610 0.97138 0.92871 0.96804 0.87008 1.19972 0.93394 0.95570 0.97848 1.21205 1.00824 0.91255 0.99267 1.21257 0.94248 0.98504 0.99638 1.21173 0.95564 0.86283 1.05200 1.98381 1.91834 1.22953 1.92250 1.21277 0.99907 0.92183 1.00327 1.21303 0.96327 0.96344 0.98506 1.23380 0.97247 0.99590 0.95871 1.22793 0.96515 0.93435 1.03570 1.21501 0.82201 0.94957 1.08493 1.23955 0.91652 1.08056 0.90830 1.86514 1.46549 1.65503 1.38027 0.93699 0.79896 0.72356 0.87576 1.83668 1.16871 1.35247 1.71569 0.88478 0.88978 0.88209 0.74997 0.88143 0.91713 0.83479 0.84270 0.84216 0.83193 0.89300 0.87759 0.80152 0.84937 0.74143 1.18827 1.24135 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.08 9.14 71.24 0.65 0.57 16 2 C 0.08 0.39 7.37 25.26 0.19 0.58 16 3 C -0.27 -1.19 6.31 -18.99 -0.12 -1.31 16 4 C 0.59 3.40 7.81 86.65 0.68 4.07 16 5 O -0.57 -6.89 15.26 -4.07 -0.06 -6.96 16 6 N -0.69 0.68 5.26 -443.34 -2.33 -1.66 16 7 C 0.12 -0.22 4.32 45.52 0.20 -0.02 16 8 H 0.09 0.18 7.46 -2.38 -0.02 0.17 16 9 C -0.14 0.42 7.26 31.12 0.23 0.64 16 10 C -0.07 0.37 3.85 -11.01 -0.04 0.33 16 11 H 0.11 -0.89 8.09 -2.38 -0.02 -0.91 16 12 C -0.07 0.18 5.29 -19.86 -0.11 0.08 16 13 C -0.11 0.20 8.60 22.26 0.19 0.39 16 14 C -0.12 -0.09 9.83 22.29 0.22 0.13 16 15 C -0.06 -0.15 6.32 22.32 0.14 -0.01 16 16 Cl -0.08 -0.34 28.96 -2.72 -0.08 -0.42 16 17 C -0.12 -0.06 9.83 22.29 0.22 0.16 16 18 C -0.11 0.24 9.71 22.27 0.22 0.45 16 19 C -0.12 0.76 7.29 31.12 0.23 0.99 16 20 C -0.14 -0.07 10.48 23.65 0.25 0.17 16 21 C -0.02 -0.04 6.22 24.76 0.15 0.11 16 22 C -0.04 0.13 2.96 71.24 0.21 0.35 16 23 O -0.55 1.01 12.86 -148.98 -1.92 -0.90 16 24 Si 0.76 -2.03 32.09 68.60 2.20 0.17 16 25 O -0.18 -0.78 8.90 4.41 0.04 -0.74 16 26 H 0.10 -0.28 8.14 -2.38 -0.02 -0.30 16 27 H 0.09 0.22 8.08 -2.39 -0.02 0.20 16 28 H 0.10 0.10 8.08 -2.38 -0.02 0.08 16 29 H 0.41 -2.51 7.87 -92.71 -0.73 -3.24 16 30 H 0.10 -0.38 6.33 -2.39 -0.02 -0.39 16 31 H 0.06 -0.01 8.14 -2.38 -0.02 -0.03 16 32 H 0.15 -0.78 6.68 -2.91 -0.02 -0.80 16 33 H 0.14 -0.17 8.06 -2.91 -0.02 -0.20 16 34 H 0.14 -0.23 8.06 -2.91 -0.02 -0.26 16 35 H 0.15 -0.99 8.05 -2.91 -0.02 -1.02 16 36 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 37 H 0.10 -0.69 7.71 -2.38 -0.02 -0.70 16 38 H 0.18 -0.99 7.74 -2.91 -0.02 -1.01 16 39 H 0.13 -1.40 7.96 -2.39 -0.02 -1.42 16 40 H 0.41 -4.35 8.74 -74.06 -0.65 -5.00 16 41 H -0.26 0.26 7.11 99.48 0.71 0.96 16 42 H -0.31 -2.44 7.11 99.48 0.71 -1.73 16 Total: 0.00 -20.20 373.50 1.09 -19.11 By element: Atomic # 1 Polarization: -16.04 SS G_CDS: -0.26 Total: -16.30 kcal Atomic # 6 Polarization: 4.19 SS G_CDS: 3.50 Total: 7.68 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -2.33 Total: -1.66 kcal Atomic # 8 Polarization: -6.66 SS G_CDS: -1.94 Total: -8.60 kcal Atomic # 14 Polarization: -2.03 SS G_CDS: 2.20 Total: 0.17 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -0.08 Total: -0.42 kcal Total: -20.20 1.09 -19.11 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.416 kcal (2) G-P(sol) polarization free energy of solvation -20.202 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.114 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.698 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds