Wall clock time and date at job start Mon Mar 8 2021 05:01:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39206 * 119.92937 * 239.73104 * 4 2 1 6 6 C 1.50693 * 119.96798 * 359.97310 * 5 4 2 7 7 O 1.42906 * 109.46958 * 75.00154 * 6 5 4 8 8 Si 1.86295 * 109.47443 * 195.00119 * 6 5 4 9 9 C 1.37634 * 120.06756 * 179.72322 * 5 4 2 10 10 C 1.39785 * 119.92582 * 0.54888 * 9 5 4 11 11 C 1.47520 * 120.06381 * 179.70489 * 10 9 5 12 12 O 1.21594 * 120.00407 * 0.02562 * 11 10 9 13 13 N 1.34774 * 119.99765 * 180.02562 * 11 10 9 14 14 C 1.46499 * 120.00180 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.84838 * 23.80504 * 14 13 11 16 16 C 1.53779 * 113.61881 * 154.99904 * 14 13 11 17 17 C 1.53780 * 87.07991 * 89.11959 * 16 14 13 18 18 H 1.09004 * 113.61722 * 270.80761 * 17 16 14 19 19 C 1.50694 * 113.61527 * 139.98377 * 17 16 14 20 20 C 1.38242 * 119.98808 * 299.73079 * 19 17 16 21 21 C 1.38222 * 120.01442 * 179.72972 * 20 19 17 22 22 C 1.38355 * 119.98317 * 0.53875 * 21 20 19 23 23 Cl 1.73601 * 120.00753 * 179.75468 * 22 21 20 24 24 C 1.38353 * 119.97259 * 359.73339 * 22 21 20 25 25 C 1.38206 * 119.99111 * 359.97438 * 24 22 21 26 26 C 1.53776 * 113.61998 * 252.50086 * 14 13 11 27 27 C 1.39809 * 119.86329 * 359.71902 * 10 9 5 28 28 C 1.37582 * 119.93561 * 0.02562 * 27 10 9 29 29 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 30 30 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 31 31 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 32 32 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 33 33 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 34 34 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 35 35 H 1.09001 * 109.47417 * 315.00615 * 6 5 4 36 36 H 0.96703 * 113.99755 * 179.97438 * 7 6 5 37 37 H 1.48493 * 110.00296 * 300.00318 * 8 6 5 38 38 H 1.48505 * 109.99786 * 61.32501 * 8 6 5 39 39 H 1.07994 * 120.03330 * 180.27395 * 9 5 4 40 40 H 0.97001 * 120.00096 * 0.02562 * 13 11 10 41 41 H 1.08992 * 113.62013 * 203.67042 * 16 14 13 42 42 H 1.09004 * 113.61217 * 334.57711 * 16 14 13 43 43 H 1.08004 * 119.98979 * 359.97438 * 20 19 17 44 44 H 1.08000 * 120.00228 * 180.27382 * 21 20 19 45 45 H 1.07998 * 120.00153 * 180.02562 * 24 22 21 46 46 H 1.07990 * 119.99702 * 180.02562 * 25 24 22 47 47 H 1.09005 * 113.61399 * 25.42958 * 26 14 13 48 48 H 1.09004 * 113.61717 * 156.32931 * 26 14 13 49 49 H 1.08003 * 120.03222 * 180.02562 * 27 10 9 50 50 H 1.08002 * 119.96907 * 180.02562 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7839 -1.8297 -0.8520 6 6 3.1270 -2.2377 0.5575 7 8 1.9957 -2.8708 1.1589 8 14 4.5611 -3.4265 0.5282 9 6 3.2740 -2.5528 -1.9156 10 6 2.9603 -2.1699 -3.2228 11 6 3.4893 -2.9389 -4.3652 12 8 4.1985 -3.9071 -4.1703 13 7 3.1864 -2.5682 -5.6251 14 6 3.7121 -3.3314 -6.7597 15 1 3.9652 -4.3588 -6.4978 16 6 2.8559 -3.2131 -8.0316 17 6 3.7066 -1.9847 -8.3953 18 1 3.3132 -1.0484 -7.9994 19 6 4.0520 -1.9018 -9.8597 20 6 4.7775 -2.9157 -10.4571 21 6 5.0898 -2.8428 -11.8016 22 6 4.6857 -1.7495 -12.5470 23 17 5.0831 -1.6544 -14.2342 24 6 3.9646 -0.7325 -11.9473 25 6 3.6477 -0.8093 -10.6043 26 6 4.8217 -2.5998 -7.5332 27 6 2.1444 -1.0565 -3.4454 28 6 1.6533 -0.3409 -2.3778 29 1 -0.3634 -1.0252 0.0708 30 1 -0.3633 0.4513 -0.9233 31 1 -0.3633 0.5740 0.8525 32 1 1.6461 1.8947 0.8901 33 1 3.0851 1.3422 0.0005 34 1 1.6460 1.8948 -0.8900 35 1 3.3990 -1.3545 1.1355 36 1 2.1451 -3.1607 2.0693 37 1 4.2030 -4.6351 -0.2567 38 1 5.7532 -2.7698 -0.0658 39 1 3.9038 -3.4124 -1.7404 40 1 2.6209 -1.7956 -5.7807 41 1 2.9791 -4.0489 -8.7202 42 1 1.8103 -2.9769 -7.8336 43 1 5.0969 -3.7668 -9.8739 44 1 5.6528 -3.6371 -12.2690 45 1 3.6486 0.1210 -12.5288 46 1 3.0844 -0.0157 -10.1362 47 1 5.3632 -1.8686 -6.9330 48 1 5.4824 -3.2681 -8.0856 49 1 1.9000 -0.7585 -4.4543 50 1 1.0227 0.5190 -2.5491 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:01:16 Heat of formation + Delta-G solvation = 30.466369 kcal Electronic energy + Delta-G solvation = -32364.230632 eV Core-core repulsion = 27964.153819 eV Total energy + Delta-G solvation = -4400.076813 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.139 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -42.00489 -41.29716 -40.34578 -39.02243 -37.73956 -37.39796 -37.27467 -34.87585 -32.99403 -32.11001 -31.79883 -31.07965 -28.53025 -26.93753 -26.85410 -26.76555 -25.62847 -23.97712 -23.45630 -22.93195 -22.55803 -21.34288 -20.29906 -18.96135 -18.34973 -18.32284 -17.90262 -17.49841 -16.96474 -16.54653 -16.41744 -16.30095 -16.15109 -15.93429 -15.80974 -15.35328 -15.28771 -14.97060 -14.79112 -14.62583 -14.55991 -14.37682 -14.14250 -13.87947 -13.78894 -13.61671 -13.54679 -13.32113 -13.30065 -13.06111 -12.76086 -12.64493 -12.64164 -12.48586 -12.19524 -12.06824 -12.04968 -11.78864 -11.66518 -11.30727 -11.28925 -10.34707 -10.28110 -10.19267 -10.04163 -9.88685 -9.53419 -9.52660 -5.05921 -0.51799 0.00960 0.08921 0.29126 1.13955 1.26977 1.48044 1.56864 1.85353 1.93841 2.47406 2.55826 2.74174 3.33872 3.38788 3.47440 3.57910 3.60873 3.65106 3.79936 3.85307 3.91034 3.92022 3.96353 4.08046 4.14415 4.16210 4.32823 4.37465 4.38649 4.41201 4.42556 4.54382 4.58467 4.61665 4.68593 4.70506 4.72810 4.78942 4.85114 4.91123 4.95575 4.98151 5.00023 5.00773 5.01521 5.06910 5.15303 5.22172 5.24615 5.39679 5.44875 5.60069 5.81005 5.85384 6.22249 6.30283 6.96348 6.97133 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.518 5.518 3 C 0.024 3.976 4 C 0.143 3.857 5 C -0.083 4.083 6 C -0.044 4.044 7 O -0.553 6.553 8 Si 0.752 3.248 9 C -0.083 4.083 10 C -0.153 4.153 11 C 0.560 3.440 12 O -0.584 6.584 13 N -0.689 5.689 14 C 0.110 3.890 15 H 0.084 0.916 16 C -0.123 4.123 17 C -0.063 4.063 18 H 0.119 0.881 19 C -0.068 4.068 20 C -0.109 4.109 21 C -0.119 4.119 22 C -0.055 4.055 23 Cl -0.083 7.083 24 C -0.118 4.118 25 C -0.104 4.104 26 C -0.143 4.143 27 C -0.054 4.054 28 C -0.153 4.153 29 H 0.060 0.940 30 H 0.042 0.958 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.066 0.934 34 H 0.043 0.957 35 H 0.094 0.906 36 H 0.400 0.600 37 H -0.304 1.304 38 H -0.296 1.296 39 H 0.111 0.889 40 H 0.417 0.583 41 H 0.103 0.897 42 H 0.092 0.908 43 H 0.145 0.855 44 H 0.138 0.862 45 H 0.141 0.859 46 H 0.154 0.846 47 H 0.068 0.932 48 H 0.099 0.901 49 H 0.167 0.833 50 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.267 6.307 3.364 8.325 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 N -0.239 5.239 3 C -0.121 4.121 4 C 0.048 3.952 5 C -0.084 4.084 6 C -0.156 4.156 7 O -0.362 6.362 8 Si 0.661 3.339 9 C -0.102 4.102 10 C -0.156 4.156 11 C 0.349 3.651 12 O -0.465 6.465 13 N -0.340 5.340 14 C 0.004 3.996 15 H 0.102 0.898 16 C -0.160 4.160 17 C -0.081 4.081 18 H 0.137 0.863 19 C -0.069 4.069 20 C -0.127 4.127 21 C -0.137 4.137 22 C -0.082 4.082 23 Cl -0.054 7.054 24 C -0.137 4.137 25 C -0.122 4.122 26 C -0.182 4.182 27 C -0.073 4.073 28 C -0.173 4.173 29 H 0.078 0.922 30 H 0.060 0.940 31 H 0.106 0.894 32 H 0.108 0.892 33 H 0.085 0.915 34 H 0.061 0.939 35 H 0.112 0.888 36 H 0.251 0.749 37 H -0.233 1.233 38 H -0.224 1.224 39 H 0.128 0.872 40 H 0.256 0.744 41 H 0.121 0.879 42 H 0.110 0.890 43 H 0.162 0.838 44 H 0.156 0.844 45 H 0.159 0.841 46 H 0.171 0.829 47 H 0.086 0.914 48 H 0.117 0.883 49 H 0.185 0.815 50 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -3.280 5.136 2.725 6.675 hybrid contribution -0.241 0.608 -1.513 1.648 sum -3.521 5.744 1.212 6.845 Atomic orbital electron populations 1.22454 0.84204 1.02644 1.02055 1.59357 1.09718 1.14810 1.40017 1.22562 1.00727 0.86273 1.02582 1.18963 0.93290 0.92855 0.90067 1.19485 0.98911 0.95755 0.94230 1.24333 0.96751 1.02843 0.91634 1.86434 1.36548 1.79435 1.33761 0.94927 0.74529 0.76834 0.87642 1.21052 0.98356 0.98159 0.92621 1.19843 1.03826 0.99499 0.92415 1.18393 0.79494 0.83308 0.83949 1.90788 1.39853 1.29793 1.86046 1.45400 1.52017 1.32748 1.03880 1.21944 0.96239 0.96007 0.85383 0.89776 1.23384 0.99557 0.98380 0.94716 1.21617 0.97021 0.99675 0.89794 0.86320 1.19957 0.96896 0.94135 0.95875 1.21202 0.98152 0.99661 0.93686 1.21248 1.00589 0.97370 0.94542 1.21179 1.03134 0.98333 0.85512 1.98383 1.92963 1.98291 1.15768 1.21290 0.98118 0.98289 0.95960 1.21310 0.99598 0.98564 0.92739 1.23577 0.96675 1.00164 0.97765 1.21473 0.93076 0.91635 1.01128 1.21958 1.01663 1.01637 0.92070 0.92152 0.93971 0.89354 0.89211 0.91545 0.93859 0.88772 0.74949 1.23283 1.22370 0.87167 0.74399 0.87893 0.88970 0.83761 0.84415 0.84095 0.82863 0.91351 0.88281 0.81525 0.82367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.09 9.34 127.69 1.19 1.11 16 2 N -0.52 0.20 4.20 -745.08 -3.13 -2.93 16 3 C 0.02 -0.11 9.32 127.69 1.19 1.08 16 4 C 0.14 0.34 4.69 38.47 0.18 0.52 16 5 C -0.08 -0.54 5.30 -19.78 -0.10 -0.65 16 6 C -0.04 -0.12 2.32 71.23 0.17 0.05 16 7 O -0.55 -1.16 12.86 -148.98 -1.92 -3.07 16 8 Si 0.75 2.74 30.20 68.60 2.07 4.81 16 9 C -0.08 -0.84 8.19 22.50 0.18 -0.66 16 10 C -0.15 -0.90 5.88 -20.08 -0.12 -1.02 16 11 C 0.56 4.54 7.76 86.69 0.67 5.22 16 12 O -0.58 -10.47 15.94 -4.01 -0.06 -10.54 16 13 N -0.69 0.63 5.21 -443.22 -2.31 -1.68 16 14 C 0.11 -0.12 4.32 45.52 0.20 0.08 16 15 H 0.08 0.36 7.46 -2.39 -0.02 0.34 16 16 C -0.12 0.76 7.29 31.12 0.23 0.98 16 17 C -0.06 0.41 3.86 -11.02 -0.04 0.37 16 18 H 0.12 -1.19 8.09 -2.39 -0.02 -1.21 16 19 C -0.07 0.22 5.29 -19.86 -0.11 0.12 16 20 C -0.11 0.19 8.62 22.27 0.19 0.38 16 21 C -0.12 -0.10 9.83 22.29 0.22 0.12 16 22 C -0.06 -0.13 6.32 22.33 0.14 0.01 16 23 Cl -0.08 -0.33 28.96 -2.72 -0.08 -0.41 16 24 C -0.12 0.02 9.83 22.29 0.22 0.24 16 25 C -0.10 0.33 9.71 22.26 0.22 0.55 16 26 C -0.14 0.41 7.25 31.12 0.23 0.64 16 27 C -0.05 0.12 9.53 22.49 0.21 0.33 16 28 C -0.15 0.31 8.57 22.36 0.19 0.50 16 29 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 30 H 0.04 -0.21 7.10 -2.39 -0.02 -0.23 16 31 H 0.09 -0.44 8.14 -2.38 -0.02 -0.46 16 32 H 0.09 -0.57 8.14 -2.38 -0.02 -0.59 16 33 H 0.07 -0.22 8.12 -2.39 -0.02 -0.24 16 34 H 0.04 -0.27 7.45 -2.39 -0.02 -0.29 16 35 H 0.09 -0.03 7.78 -2.39 -0.02 -0.05 16 36 H 0.40 -3.19 8.74 -74.05 -0.65 -3.83 16 37 H -0.30 -3.96 6.74 99.48 0.67 -3.29 16 38 H -0.30 -3.01 7.11 99.48 0.71 -2.30 16 39 H 0.11 1.66 4.47 -2.91 -0.01 1.64 16 40 H 0.42 -3.43 6.72 -92.71 -0.62 -4.06 16 41 H 0.10 -0.62 7.73 -2.39 -0.02 -0.64 16 42 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 43 H 0.14 -0.69 6.64 -2.91 -0.02 -0.70 16 44 H 0.14 -0.12 8.06 -2.91 -0.02 -0.15 16 45 H 0.14 -0.34 8.06 -2.91 -0.02 -0.36 16 46 H 0.15 -1.25 8.05 -2.92 -0.02 -1.27 16 47 H 0.07 -0.05 8.14 -2.38 -0.02 -0.07 16 48 H 0.10 -0.31 6.29 -2.39 -0.02 -0.33 16 49 H 0.17 -1.78 6.39 -2.91 -0.02 -1.80 16 50 H 0.16 -1.17 7.01 -2.91 -0.02 -1.19 16 Total: 0.00 -25.23 419.31 -0.44 -25.68 By element: Atomic # 1 Polarization: -21.54 SS G_CDS: -0.27 Total: -21.82 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: 5.26 Total: 9.97 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -5.44 Total: -4.62 kcal Atomic # 8 Polarization: -11.63 SS G_CDS: -1.98 Total: -13.61 kcal Atomic # 14 Polarization: 2.74 SS G_CDS: 2.07 Total: 4.81 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -0.08 Total: -0.41 kcal Total: -25.23 -0.44 -25.68 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.143 kcal (2) G-P(sol) polarization free energy of solvation -25.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.677 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.466 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds