Wall clock time and date at job start Mon Mar 8 2021 05:01:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86298 * 109.47172 * 2 1 4 4 C 1.50697 * 109.47165 * 120.00297 * 2 1 3 5 5 C 1.31116 * 118.54929 * 249.97459 * 4 2 1 6 6 N 1.38921 * 121.85135 * 180.38312 * 5 4 2 7 7 C 1.47032 * 118.88299 * 346.70897 * 6 5 4 8 8 C 1.50698 * 109.82348 * 163.20059 * 7 6 5 9 9 O 1.21279 * 119.99800 * 340.00556 * 8 7 6 10 10 N 1.34778 * 120.00125 * 159.99613 * 8 7 6 11 11 C 1.46494 * 120.00243 * 180.02562 * 10 8 7 12 12 H 1.09001 * 112.84646 * 336.20305 * 11 10 8 13 13 C 1.53782 * 113.61573 * 107.50177 * 11 10 8 14 14 C 1.53784 * 87.07611 * 89.11912 * 13 11 10 15 15 H 1.08997 * 113.69164 * 270.87221 * 14 13 11 16 16 C 1.50706 * 113.61222 * 139.98511 * 14 13 11 17 17 C 1.38242 * 119.98446 * 322.22291 * 16 14 13 18 18 C 1.38216 * 120.01299 * 179.77161 * 17 16 14 19 19 C 1.38351 * 119.98338 * 0.53014 * 18 17 16 20 20 Cl 1.73601 * 120.01235 * 179.70545 * 19 18 17 21 21 C 1.38357 * 119.97524 * 359.72467 * 19 18 17 22 22 C 1.38215 * 119.98712 * 359.97438 * 21 19 18 23 23 C 1.53781 * 87.08370 * 25.43577 * 14 13 11 24 24 C 1.53184 * 107.57631 * 43.65800 * 7 6 5 25 25 C 1.50207 * 118.54488 * 69.99870 * 4 2 1 26 26 H 0.96701 * 113.99603 * 59.99198 * 1 2 3 27 27 H 1.08999 * 109.46939 * 240.00219 * 2 1 3 28 28 H 1.48496 * 109.99902 * 60.00546 * 3 2 1 29 29 H 1.48504 * 110.00017 * 181.32071 * 3 2 1 30 30 H 1.08003 * 119.07194 * 0.40698 * 5 4 2 31 31 H 0.96994 * 120.55742 * 166.73030 * 6 5 4 32 32 H 1.09006 * 109.82407 * 284.06280 * 7 6 5 33 33 H 0.97005 * 119.99617 * 0.02562 * 10 8 7 34 34 H 1.08997 * 113.61861 * 203.66821 * 13 11 10 35 35 H 1.09002 * 113.61316 * 334.57365 * 13 11 10 36 36 H 1.08003 * 119.99712 * 0.02562 * 17 16 14 37 37 H 1.07999 * 120.00605 * 180.25981 * 18 17 16 38 38 H 1.07995 * 120.00288 * 179.97438 * 21 19 18 39 39 H 1.07994 * 119.99401 * 179.97438 * 22 21 19 40 40 H 1.08996 * 113.60961 * 220.02187 * 23 14 13 41 41 H 1.08996 * 113.69407 * 89.12322 * 23 14 13 42 42 H 1.08999 * 109.41267 * 179.25072 * 24 7 6 43 43 H 1.09000 * 109.64521 * 58.80536 * 24 7 6 44 44 H 1.09002 * 109.32969 * 280.20806 * 25 4 2 45 45 H 1.08996 * 109.33365 * 39.86136 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.5121 -0.0030 2.1693 6 7 3.0072 -0.5883 3.3278 7 6 2.6226 -1.9715 3.6450 8 6 3.5618 -2.5390 4.6779 9 8 4.6510 -2.0341 4.8496 10 7 3.1912 -3.6075 5.4110 11 6 4.1039 -4.1589 6.4155 12 1 5.1487 -3.9234 6.2126 13 6 3.6749 -3.8682 7.8634 14 6 2.8667 -5.1751 7.8030 15 1 1.8490 -5.0441 7.4354 16 6 2.9304 -5.9834 9.0734 17 6 4.1103 -6.0514 9.7905 18 6 4.1681 -6.7888 10.9582 19 6 3.0479 -7.4678 11.4033 20 17 3.1218 -8.4003 12.8657 21 6 1.8688 -7.4036 10.6823 22 6 1.8105 -6.6609 9.5181 23 6 3.8560 -5.6450 6.7236 24 6 2.7177 -2.7863 2.3514 25 6 1.7451 -2.1978 1.3267 26 1 -0.3933 0.4418 -0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5616 2.4678 1.2085 29 1 3.5347 1.7702 -0.0322 30 1 2.6078 1.0648 2.0384 31 1 3.5965 -0.0927 3.9176 32 1 1.6005 -1.9935 4.0233 33 1 2.3200 -4.0115 5.2735 34 1 4.4984 -3.8966 8.5769 35 1 3.0563 -2.9765 7.9648 36 1 4.9860 -5.5250 9.4406 37 1 5.0888 -6.8384 11.5206 38 1 0.9942 -7.9338 11.0291 39 1 0.8903 -6.6111 8.9550 40 1 3.3835 -6.1876 5.9049 41 1 4.7295 -6.1595 7.1241 42 1 2.4507 -3.8232 2.5559 43 1 3.7343 -2.7373 1.9614 44 1 0.7221 -2.4142 1.6345 45 1 1.9316 -2.6487 0.3520 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9610464_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:01:40 Heat of formation + Delta-G solvation = 0.728204 kcal Electronic energy + Delta-G solvation = -27301.645726 eV Core-core repulsion = 23312.269269 eV Total energy + Delta-G solvation = -3989.376457 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.123 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.90997 -40.96725 -39.73668 -38.83075 -37.39911 -37.28218 -34.78489 -33.34695 -33.08704 -32.18537 -31.54786 -27.80489 -26.93135 -26.13301 -25.37949 -24.07629 -23.67708 -22.69355 -21.99320 -20.37608 -19.27945 -19.10794 -18.41089 -18.23186 -17.60768 -17.31663 -16.77685 -16.54404 -16.24273 -15.97342 -15.53907 -15.38552 -15.28189 -14.97621 -14.69577 -14.61514 -14.53015 -14.41098 -14.20405 -13.78245 -13.71789 -13.66134 -13.58161 -13.35972 -12.91469 -12.69866 -12.50407 -12.37482 -12.15450 -11.84798 -11.80673 -11.76139 -11.72669 -11.41704 -11.36977 -10.90040 -10.27185 -10.10961 -10.08998 -9.57481 -8.51909 -4.91615 0.03862 0.21710 1.15538 1.25707 1.38007 1.40435 1.67965 1.73180 2.00726 2.48598 2.52632 3.23746 3.36530 3.46021 3.51378 3.61395 3.66606 3.68189 3.77215 3.81913 3.84312 3.96301 3.98727 4.15837 4.21533 4.29769 4.30585 4.43934 4.52480 4.53566 4.58052 4.61841 4.65330 4.69111 4.73128 4.81010 4.87581 4.91089 4.93310 5.14136 5.15702 5.18214 5.22010 5.34316 5.48644 5.50035 5.71174 6.13997 6.30453 6.72923 6.79267 6.98583 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.045 4.045 3 Si 0.665 3.335 4 C -0.232 4.232 5 C 0.135 3.865 6 N -0.732 5.732 7 C 0.137 3.863 8 C 0.516 3.484 9 O -0.527 6.527 10 N -0.708 5.708 11 C 0.118 3.882 12 H 0.107 0.893 13 C -0.144 4.144 14 C -0.074 4.074 15 H 0.100 0.900 16 C -0.068 4.068 17 C -0.105 4.105 18 C -0.107 4.107 19 C -0.038 4.038 20 Cl -0.069 7.069 21 C -0.108 4.108 22 C -0.103 4.103 23 C -0.135 4.135 24 C -0.128 4.128 25 C -0.051 4.051 26 H 0.376 0.624 27 H 0.065 0.935 28 H -0.255 1.255 29 H -0.257 1.257 30 H 0.126 0.874 31 H 0.408 0.592 32 H 0.092 0.908 33 H 0.404 0.596 34 H 0.097 0.903 35 H 0.076 0.924 36 H 0.133 0.867 37 H 0.134 0.866 38 H 0.134 0.866 39 H 0.131 0.869 40 H 0.079 0.921 41 H 0.100 0.900 42 H 0.080 0.920 43 H 0.077 0.923 44 H 0.072 0.928 45 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.754 -0.742 -3.462 4.486 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.158 4.158 3 Si 0.568 3.432 4 C -0.242 4.242 5 C 0.015 3.985 6 N -0.365 5.365 7 C 0.028 3.972 8 C 0.302 3.698 9 O -0.402 6.402 10 N -0.360 5.360 11 C 0.013 3.987 12 H 0.125 0.875 13 C -0.182 4.182 14 C -0.093 4.093 15 H 0.118 0.882 16 C -0.068 4.068 17 C -0.123 4.123 18 C -0.126 4.126 19 C -0.065 4.065 20 Cl -0.040 7.040 21 C -0.126 4.126 22 C -0.121 4.121 23 C -0.173 4.173 24 C -0.166 4.166 25 C -0.089 4.089 26 H 0.223 0.777 27 H 0.083 0.917 28 H -0.180 1.180 29 H -0.182 1.182 30 H 0.142 0.858 31 H 0.245 0.755 32 H 0.109 0.891 33 H 0.239 0.761 34 H 0.115 0.885 35 H 0.094 0.906 36 H 0.150 0.850 37 H 0.152 0.848 38 H 0.152 0.848 39 H 0.149 0.851 40 H 0.098 0.902 41 H 0.118 0.882 42 H 0.099 0.901 43 H 0.095 0.905 44 H 0.090 0.910 45 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -1.411 -0.290 -2.202 2.631 hybrid contribution -0.183 -0.635 0.618 0.905 sum -1.593 -0.925 -1.584 2.430 Atomic orbital electron populations 1.86515 1.18180 1.81628 1.49307 1.24429 0.84948 1.08646 0.97727 0.95522 0.80994 0.79274 0.87444 1.20080 1.12026 0.95706 0.96360 1.20249 0.96376 0.95566 0.86345 1.44214 1.55011 1.12478 1.24807 1.20944 0.97325 0.84283 0.94647 1.20608 0.87773 0.80218 0.81235 1.90742 1.22313 1.59430 1.67746 1.45606 1.20158 1.31936 1.38316 1.21881 0.95264 0.93931 0.87625 0.87524 1.23576 1.00497 0.97336 0.96808 1.21625 0.99692 0.95266 0.92677 0.88172 1.19784 0.93505 0.97386 0.96108 1.20988 0.98049 0.98871 0.94374 1.21092 0.97715 0.96876 0.96884 1.21002 0.96044 0.98766 0.90679 1.98395 1.98636 1.71867 1.35148 1.21102 0.96882 0.99609 0.95037 1.21039 0.98543 0.96724 0.95830 1.23431 1.00050 0.95445 0.98333 1.21835 1.01890 0.98738 0.94167 1.19970 0.98720 0.91349 0.98827 0.77734 0.91726 1.18000 1.18183 0.85759 0.75475 0.89059 0.76136 0.88484 0.90571 0.84956 0.84802 0.84824 0.85077 0.90234 0.88163 0.90111 0.90453 0.90970 0.90609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.33 12.86 -35.23 -0.45 -0.78 16 2 C -0.05 -0.02 2.80 36.00 0.10 0.08 16 3 Si 0.66 -0.30 29.92 -169.99 -5.09 -5.39 16 4 C -0.23 -0.45 5.40 -101.34 -0.55 -1.00 16 5 C 0.13 0.32 9.61 -16.08 -0.15 0.16 16 6 N -0.73 -1.32 5.46 -55.52 -0.30 -1.62 16 7 C 0.14 0.00 3.35 -68.70 -0.23 -0.23 16 8 C 0.52 0.41 7.08 -10.99 -0.08 0.33 16 9 O -0.53 -2.50 15.70 5.56 0.09 -2.42 16 10 N -0.71 1.48 5.26 -53.02 -0.28 1.20 16 11 C 0.12 -0.21 4.32 -67.12 -0.29 -0.50 16 12 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 13 C -0.14 0.30 7.25 -25.92 -0.19 0.11 16 14 C -0.07 0.22 3.86 -90.96 -0.35 -0.13 16 15 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 16 C -0.07 0.09 5.29 -104.62 -0.55 -0.46 16 17 C -0.10 0.11 8.60 -39.59 -0.34 -0.23 16 18 C -0.11 0.00 9.83 -39.55 -0.39 -0.39 16 19 C -0.04 -0.03 6.32 -39.50 -0.25 -0.28 16 20 Cl -0.07 -0.10 28.96 -51.86 -1.50 -1.61 16 21 C -0.11 0.00 9.83 -39.55 -0.39 -0.39 16 22 C -0.10 0.11 9.71 -39.59 -0.38 -0.28 16 23 C -0.13 0.43 7.29 -25.92 -0.19 0.24 16 24 C -0.13 0.06 5.44 -26.61 -0.14 -0.08 16 25 C -0.05 -0.02 5.86 -28.10 -0.16 -0.19 16 26 H 0.38 -1.56 8.74 45.56 0.40 -1.16 16 27 H 0.06 -0.05 7.96 -51.93 -0.41 -0.47 16 28 H -0.25 -0.64 6.88 56.52 0.39 -0.25 16 29 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 30 H 0.13 0.28 4.34 -52.48 -0.23 0.05 16 31 H 0.41 0.79 8.12 -40.82 -0.33 0.45 16 32 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 33 H 0.40 -1.87 8.70 -40.82 -0.36 -2.22 16 34 H 0.10 -0.22 6.32 -51.93 -0.33 -0.55 16 35 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.13 -0.35 6.67 -52.48 -0.35 -0.70 16 37 H 0.13 -0.14 8.06 -52.49 -0.42 -0.57 16 38 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.13 -0.38 8.05 -52.49 -0.42 -0.80 16 40 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 41 H 0.10 -0.31 7.72 -51.93 -0.40 -0.71 16 42 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 43 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 44 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 45 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 379.29 15.07 5.72 5.72 Total: 0.00 -7.96 379.29 -12.62 -20.58 By element: Atomic # 1 Polarization: -6.19 SS G_CDS: -6.25 Total: -12.44 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -4.54 Total: -3.24 kcal Atomic # 7 Polarization: 0.16 SS G_CDS: -0.58 Total: -0.42 kcal Atomic # 8 Polarization: -2.83 SS G_CDS: -0.37 Total: -3.20 kcal Atomic # 14 Polarization: -0.30 SS G_CDS: -5.09 Total: -5.39 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.50 Total: -1.61 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -7.96 -12.62 -20.58 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.306 kcal (2) G-P(sol) polarization free energy of solvation -7.962 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.344 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.578 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds