Wall clock time and date at job start Mon Mar 8 2021 05:01:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.46860 * 2 1 4 4 C 1.50702 * 109.47100 * 119.99609 * 2 1 3 5 5 C 1.31116 * 118.54836 * 255.97036 * 4 2 1 6 6 N 1.38927 * 121.84748 * 180.42725 * 5 4 2 7 7 C 1.47026 * 118.88183 * 346.66625 * 6 5 4 8 8 C 1.53541 * 107.66243 * 43.66627 * 7 6 5 9 9 C 1.50203 * 118.54494 * 75.71249 * 4 2 1 10 10 C 1.50707 * 109.32891 * 39.68423 * 9 4 2 11 11 O 1.21278 * 119.99946 * 86.24582 * 10 9 4 12 12 N 1.34771 * 119.99996 * 266.24269 * 10 9 4 13 13 C 1.46506 * 119.99699 * 175.53991 * 12 10 9 14 14 H 1.08997 * 112.85333 * 23.80131 * 13 12 10 15 15 C 1.53779 * 113.61289 * 155.00519 * 13 12 10 16 16 C 1.53771 * 87.08597 * 89.11253 * 15 13 12 17 17 H 1.09007 * 113.61808 * 270.88385 * 16 15 13 18 18 C 1.50703 * 113.61841 * 139.98197 * 16 15 13 19 19 C 1.38250 * 119.98187 * 299.72738 * 18 16 15 20 20 C 1.38212 * 120.01134 * 179.76775 * 19 18 16 21 21 C 1.38355 * 119.98328 * 0.52679 * 20 19 18 22 22 Cl 1.73603 * 120.01214 * 179.70622 * 21 20 19 23 23 C 1.38351 * 119.97749 * 359.72441 * 21 20 19 24 24 C 1.38213 * 119.98183 * 0.02562 * 23 21 20 25 25 C 1.53783 * 87.08383 * 25.43307 * 16 15 13 26 26 H 0.96700 * 113.99259 * 174.65456 * 1 2 3 27 27 H 1.08995 * 109.47649 * 240.00044 * 2 1 3 28 28 H 1.48498 * 110.00450 * 179.97438 * 3 2 1 29 29 H 1.48500 * 110.00039 * 301.31871 * 3 2 1 30 30 H 1.08001 * 119.07733 * 0.41250 * 5 4 2 31 31 H 0.96998 * 120.55815 * 166.64650 * 6 5 4 32 32 H 1.09005 * 109.81936 * 163.20040 * 7 6 5 33 33 H 1.08999 * 109.82915 * 284.12301 * 7 6 5 34 34 H 1.09003 * 109.62013 * 58.76333 * 8 7 6 35 35 H 1.09000 * 109.62930 * 179.32402 * 8 7 6 36 36 H 1.08998 * 109.32824 * 280.20703 * 9 4 2 37 37 H 0.97001 * 120.00666 * 355.54054 * 12 10 9 38 38 H 1.09000 * 113.61502 * 203.66349 * 15 13 12 39 39 H 1.09007 * 113.61492 * 334.47417 * 15 13 12 40 40 H 1.07993 * 119.99290 * 0.02562 * 19 18 16 41 41 H 1.08003 * 120.00931 * 180.25259 * 20 19 18 42 42 H 1.07995 * 120.00875 * 180.02562 * 23 21 20 43 43 H 1.08008 * 119.99136 * 179.97438 * 24 23 21 44 44 H 1.08997 * 113.61391 * 220.02302 * 25 16 15 45 45 H 1.08991 * 113.61583 * 89.10939 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.4035 0.0086 2.2202 6 7 2.8921 -0.5752 3.3823 7 6 2.6134 -1.9966 3.6345 8 6 2.8392 -2.7560 2.3193 9 6 1.8636 -2.2103 1.2713 10 6 2.2286 -2.7631 -0.0823 11 8 3.3919 -2.9593 -0.3636 12 7 1.2624 -3.0395 -0.9802 13 6 1.6215 -3.4840 -2.3292 14 1 2.6099 -3.9412 -2.3752 15 6 0.5254 -4.3158 -3.0159 16 6 -0.0402 -2.9879 -3.5464 17 1 -0.7617 -2.5215 -2.8755 18 6 -0.5281 -3.0653 -4.9701 19 6 0.3486 -3.4061 -5.9833 20 6 -0.0993 -3.4820 -7.2887 21 6 -1.4229 -3.2061 -7.5826 22 17 -1.9845 -3.2937 -9.2230 23 6 -2.2985 -2.8600 -6.5690 24 6 -1.8506 -2.7896 -5.2633 25 6 1.3823 -2.4192 -3.4128 26 1 -0.3932 -0.8796 -0.0823 27 1 1.7924 -0.5138 -0.8899 28 1 3.5349 1.7704 0.0006 29 1 1.5353 2.4771 -1.1921 30 1 2.4130 1.0847 2.1293 31 1 3.4087 -0.0538 4.0165 32 1 3.2897 -2.3755 4.4008 33 1 1.5801 -2.1189 3.9591 34 1 3.8650 -2.6071 1.9820 35 1 2.6524 -3.8188 2.4734 36 1 0.8488 -2.5189 1.5225 37 1 0.3291 -2.9442 -0.7334 38 1 0.9025 -4.9736 -3.7990 39 1 -0.1375 -4.8263 -2.3173 40 1 1.3826 -3.6172 -5.7542 41 1 0.5846 -3.7522 -8.0796 42 1 -3.3318 -2.6450 -6.7978 43 1 -2.5340 -2.5190 -4.4719 44 1 1.4102 -1.3974 -3.0344 45 1 1.9937 -2.5585 -4.3042 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9610464_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:01:43 Heat of formation + Delta-G solvation = -2.382028 kcal Electronic energy + Delta-G solvation = -28573.066200 eV Core-core repulsion = 24583.554873 eV Total energy + Delta-G solvation = -3989.511327 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.123 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -41.88806 -40.92132 -39.57722 -38.68571 -37.47685 -37.35860 -34.60819 -33.33300 -32.73681 -32.10757 -31.47604 -27.47216 -26.78498 -26.34969 -25.49374 -23.91792 -23.23132 -22.64806 -21.98582 -20.22247 -19.24124 -18.89715 -18.46305 -17.99430 -17.93570 -17.08231 -16.54985 -16.51205 -16.31733 -15.97563 -15.45537 -15.38389 -15.04780 -14.78437 -14.64341 -14.60736 -14.49771 -14.36374 -14.07340 -13.97522 -13.62710 -13.52698 -13.29008 -13.20071 -12.64720 -12.56959 -12.47104 -12.44483 -12.05193 -12.02149 -11.78228 -11.64396 -11.41709 -11.28406 -11.20722 -10.88882 -10.78225 -10.12982 -10.03675 -9.52979 -8.42303 -4.97120 0.08846 0.28671 1.13448 1.27553 1.39714 1.58855 1.62158 1.94110 2.14040 2.55643 2.68819 3.41482 3.53646 3.62354 3.66007 3.80684 3.80951 3.88715 3.91179 3.93961 4.01257 4.15159 4.17128 4.30550 4.32474 4.35473 4.39912 4.40844 4.59518 4.64524 4.69396 4.72781 4.75014 4.80834 4.86609 4.87659 4.96915 5.01338 5.10948 5.20281 5.22877 5.24347 5.26938 5.45551 5.49267 5.62789 5.80784 6.35692 6.46579 6.75385 6.97408 7.20317 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.058 4.058 3 Si 0.796 3.204 4 C -0.299 4.299 5 C 0.166 3.834 6 N -0.747 5.747 7 C 0.123 3.877 8 C -0.126 4.126 9 C -0.036 4.036 10 C 0.524 3.476 11 O -0.583 6.583 12 N -0.701 5.701 13 C 0.114 3.886 14 H 0.081 0.919 15 C -0.122 4.122 16 C -0.062 4.062 17 H 0.118 0.882 18 C -0.068 4.068 19 C -0.110 4.110 20 C -0.119 4.119 21 C -0.055 4.055 22 Cl -0.082 7.082 23 C -0.118 4.118 24 C -0.105 4.105 25 C -0.147 4.147 26 H 0.368 0.632 27 H 0.049 0.951 28 H -0.285 1.285 29 H -0.302 1.302 30 H 0.150 0.850 31 H 0.414 0.586 32 H 0.098 0.902 33 H 0.076 0.924 34 H 0.054 0.946 35 H 0.085 0.915 36 H 0.113 0.887 37 H 0.415 0.585 38 H 0.098 0.902 39 H 0.092 0.908 40 H 0.144 0.856 41 H 0.138 0.862 42 H 0.141 0.859 43 H 0.153 0.847 44 H 0.061 0.939 45 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.378 -0.617 7.293 8.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.168 4.168 3 Si 0.702 3.298 4 C -0.310 4.310 5 C 0.043 3.957 6 N -0.377 5.377 7 C -0.001 4.001 8 C -0.165 4.165 9 C -0.057 4.057 10 C 0.312 3.688 11 O -0.462 6.462 12 N -0.353 5.353 13 C 0.008 3.992 14 H 0.100 0.900 15 C -0.159 4.159 16 C -0.080 4.080 17 H 0.136 0.864 18 C -0.068 4.068 19 C -0.128 4.128 20 C -0.137 4.137 21 C -0.082 4.082 22 Cl -0.054 7.054 23 C -0.136 4.136 24 C -0.123 4.123 25 C -0.186 4.186 26 H 0.216 0.784 27 H 0.066 0.934 28 H -0.212 1.212 29 H -0.230 1.230 30 H 0.166 0.834 31 H 0.250 0.750 32 H 0.117 0.883 33 H 0.094 0.906 34 H 0.073 0.927 35 H 0.104 0.896 36 H 0.131 0.869 37 H 0.252 0.748 38 H 0.117 0.883 39 H 0.111 0.889 40 H 0.161 0.839 41 H 0.156 0.844 42 H 0.159 0.841 43 H 0.171 0.829 44 H 0.080 0.920 45 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.099 0.326 6.622 6.955 hybrid contribution -0.021 -1.329 -1.319 1.873 sum -2.121 -1.003 5.303 5.799 Atomic orbital electron populations 1.86758 1.17375 1.33961 1.96750 1.25091 0.84602 1.11832 0.95297 0.92691 0.75969 0.75213 0.85954 1.20369 1.18643 0.93322 0.98701 1.20537 0.92146 0.96712 0.86277 1.44695 1.59669 1.11068 1.22254 1.21685 1.02239 0.80237 0.95957 1.21816 0.98886 1.00473 0.95329 1.19765 1.01958 0.93026 0.90926 1.21079 0.85074 0.75627 0.86993 1.90686 1.21255 1.54047 1.80223 1.45685 1.10012 1.68066 1.11558 1.21821 0.99616 0.96237 0.81510 0.90037 1.23345 0.96687 0.95815 1.00103 1.21606 0.96370 0.97762 0.92305 0.86359 1.19976 0.93527 0.97730 0.95586 1.21190 1.00784 0.99459 0.91381 1.21239 0.93952 1.00393 0.98162 1.21173 0.95339 1.05857 0.85826 1.98381 1.89655 1.96942 1.20378 1.21295 1.00256 0.99845 0.92224 1.21317 0.95862 0.99012 0.96075 1.23587 0.96754 0.98901 0.99315 0.78375 0.93363 1.21191 1.23010 0.83356 0.75013 0.88340 0.90609 0.92745 0.89619 0.86891 0.74769 0.88329 0.88934 0.83884 0.84419 0.84080 0.82903 0.91994 0.88742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.71 12.63 -148.98 -1.88 -1.18 16 2 C -0.06 -0.06 2.44 71.24 0.17 0.12 16 3 Si 0.80 1.40 30.05 68.60 2.06 3.46 16 4 C -0.30 0.04 5.00 -16.76 -0.08 -0.04 16 5 C 0.17 -0.35 9.60 83.41 0.80 0.45 16 6 N -0.75 3.60 5.83 -345.90 -2.02 1.59 16 7 C 0.12 -0.73 7.15 86.46 0.62 -0.11 16 8 C -0.13 0.14 5.29 30.85 0.16 0.31 16 9 C -0.04 0.05 2.71 -12.37 -0.03 0.02 16 10 C 0.52 1.71 5.32 87.66 0.47 2.18 16 11 O -0.58 -7.84 15.64 -3.02 -0.05 -7.89 16 12 N -0.70 2.32 4.96 -440.02 -2.18 0.14 16 13 C 0.11 -0.21 4.35 45.52 0.20 -0.01 16 14 H 0.08 0.30 7.42 -2.39 -0.02 0.28 16 15 C -0.12 0.75 7.29 31.12 0.23 0.98 16 16 C -0.06 0.36 3.86 -11.02 -0.04 0.32 16 17 H 0.12 -1.08 8.10 -2.38 -0.02 -1.09 16 18 C -0.07 0.16 5.29 -19.86 -0.11 0.05 16 19 C -0.11 0.09 8.62 22.27 0.19 0.29 16 20 C -0.12 -0.19 9.83 22.29 0.22 0.03 16 21 C -0.06 -0.18 6.32 22.32 0.14 -0.04 16 22 Cl -0.08 -0.38 28.96 -2.72 -0.08 -0.46 16 23 C -0.12 -0.09 9.83 22.29 0.22 0.13 16 24 C -0.10 0.22 9.71 22.26 0.22 0.43 16 25 C -0.15 0.32 7.25 31.12 0.23 0.54 16 26 H 0.37 -3.03 8.67 -74.06 -0.64 -3.68 16 27 H 0.05 0.19 6.27 -2.39 -0.01 0.18 16 28 H -0.28 -1.93 7.11 99.48 0.71 -1.22 16 29 H -0.30 -2.69 7.11 99.48 0.71 -1.98 16 30 H 0.15 -0.86 4.68 -2.91 -0.01 -0.87 16 31 H 0.41 -3.59 8.96 -92.71 -0.83 -4.42 16 32 H 0.10 -0.87 8.14 -2.38 -0.02 -0.88 16 33 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 34 H 0.05 0.31 7.51 -2.39 -0.02 0.29 16 35 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 36 H 0.11 -0.80 8.09 -2.39 -0.02 -0.82 16 37 H 0.41 -4.13 8.22 -92.71 -0.76 -4.90 16 38 H 0.10 -0.56 7.73 -2.39 -0.02 -0.58 16 39 H 0.09 -0.78 8.14 -2.38 -0.02 -0.80 16 40 H 0.14 -0.54 6.64 -2.91 -0.02 -0.56 16 41 H 0.14 -0.03 8.06 -2.91 -0.02 -0.05 16 42 H 0.14 -0.21 8.06 -2.91 -0.02 -0.24 16 43 H 0.15 -1.05 8.06 -2.91 -0.02 -1.07 16 44 H 0.06 0.04 7.96 -2.39 -0.02 0.02 16 45 H 0.09 -0.19 6.29 -2.39 -0.02 -0.20 16 Total: 0.00 -20.50 375.45 -1.69 -22.20 By element: Atomic # 1 Polarization: -22.35 SS G_CDS: -1.14 Total: -23.49 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: 3.60 Total: 5.63 kcal Atomic # 7 Polarization: 5.92 SS G_CDS: -4.20 Total: 1.72 kcal Atomic # 8 Polarization: -7.13 SS G_CDS: -1.93 Total: -9.06 kcal Atomic # 14 Polarization: 1.40 SS G_CDS: 2.06 Total: 3.46 kcal Atomic # 17 Polarization: -0.38 SS G_CDS: -0.08 Total: -0.46 kcal Total: -20.50 -1.69 -22.20 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9610464_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.814 kcal (2) G-P(sol) polarization free energy of solvation -20.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.196 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.382 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds