Wall clock time and date at job start Mon Mar 8 2021 06:45:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86305 * 109.47040 * 2 1 4 4 C 1.50702 * 109.47054 * 119.99806 * 2 1 3 5 5 C 1.34236 * 126.50319 * 254.97454 * 4 2 1 6 6 N 1.36824 * 109.93935 * 179.97438 * 5 4 2 7 7 C 1.46509 * 125.06514 * 179.97438 * 6 5 4 8 8 C 1.50698 * 109.47085 * 265.00565 * 7 6 5 9 9 O 1.21277 * 120.00186 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99538 * 179.97438 * 8 7 6 11 11 C 1.46500 * 119.99890 * 180.02562 * 10 8 7 12 12 H 1.08997 * 112.84960 * 336.19116 * 11 10 8 13 13 C 1.53777 * 113.61591 * 107.50219 * 11 10 8 14 14 C 1.53780 * 87.08226 * 89.11646 * 13 11 10 15 15 H 1.09004 * 113.68805 * 270.87125 * 14 13 11 16 16 C 1.50700 * 113.61600 * 139.98345 * 14 13 11 17 17 C 1.38219 * 119.96639 * 322.22531 * 16 14 13 18 18 C 1.38303 * 120.00944 * 179.72780 * 17 16 14 19 19 Br 1.89104 * 120.01990 * 180.27309 * 18 17 16 20 20 C 1.38524 * 119.95927 * 0.52742 * 18 17 16 21 21 F 1.35102 * 120.02880 * 179.73014 * 20 18 17 22 22 C 1.38449 * 119.93875 * 359.74641 * 20 18 17 23 23 C 1.38191 * 119.98821 * 0.02562 * 22 20 18 24 24 C 1.53780 * 113.61381 * 205.00035 * 11 10 8 25 25 C 1.37692 * 109.87585 * 0.02562 * 6 5 4 26 26 C 1.39085 * 133.51567 * 180.02562 * 25 6 5 27 27 C 1.37793 * 119.77920 * 179.97438 * 26 25 6 28 28 C 1.38788 * 120.66312 * 359.97438 * 27 26 25 29 29 C 1.36656 * 120.53190 * 0.02562 * 28 27 26 30 30 C 1.39593 * 119.76054 * 0.02562 * 29 28 27 31 31 H 0.96707 * 114.00082 * 300.00568 * 1 2 3 32 32 H 1.08994 * 109.47308 * 240.00017 * 2 1 3 33 33 H 1.48503 * 109.99838 * 178.67934 * 3 2 1 34 34 H 1.48494 * 110.00215 * 299.99759 * 3 2 1 35 35 H 1.07999 * 125.02769 * 359.97438 * 5 4 2 36 36 H 1.09000 * 109.46481 * 25.00513 * 7 6 5 37 37 H 1.08993 * 109.46878 * 145.00195 * 7 6 5 38 38 H 0.97002 * 120.00534 * 359.97438 * 10 8 7 39 39 H 1.09005 * 113.61280 * 203.66266 * 13 11 10 40 40 H 1.09001 * 113.61693 * 334.56784 * 13 11 10 41 41 H 1.07997 * 119.99703 * 0.02562 * 17 16 14 42 42 H 1.08000 * 120.00719 * 180.02562 * 22 20 18 43 43 H 1.07996 * 119.98264 * 180.02562 * 23 22 20 44 44 H 1.09001 * 113.61698 * 25.42657 * 24 11 10 45 45 H 1.09000 * 113.61643 * 156.33657 * 24 11 10 46 46 H 1.08001 * 120.11475 * 359.71579 * 26 25 6 47 47 H 1.07995 * 119.66646 * 180.02562 * 27 26 25 48 48 H 1.08004 * 119.73682 * 180.02562 * 28 27 26 49 49 H 1.08003 * 120.12056 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4612 -0.1376 2.3228 6 7 2.8025 -1.0989 3.2347 7 6 3.4080 -0.8404 4.5435 8 6 4.9061 -0.9642 4.4372 9 8 5.4177 -1.2416 3.3732 10 7 5.6774 -0.7667 5.5247 11 6 7.1338 -0.8865 5.4213 12 1 7.4487 -1.5145 4.5880 13 6 7.8694 0.4621 5.4912 14 6 7.9087 0.2723 7.0168 15 1 7.0375 0.6781 7.5311 16 6 9.2104 0.6989 7.6448 17 6 10.4038 0.4616 6.9892 18 6 11.5986 0.8578 7.5622 19 35 13.2309 0.5401 6.6619 20 6 11.5992 1.4828 8.7985 21 9 12.7659 1.8655 9.3620 22 6 10.4031 1.7145 9.4561 23 6 9.2103 1.3219 8.8793 24 6 7.8188 -1.2399 6.7520 25 6 2.4932 -2.3456 2.7387 26 6 2.6271 -3.6360 3.2400 27 6 2.2127 -4.7105 2.4835 28 6 1.6615 -4.5191 1.2242 29 6 1.5206 -3.2599 0.7122 30 6 1.9348 -2.1570 1.4611 31 1 -0.3934 0.4418 0.7651 32 1 1.7923 -0.5138 -0.8899 33 1 3.5346 1.7703 0.0322 34 1 1.5615 2.4679 -1.2085 35 1 2.5979 0.9247 2.4613 36 1 3.1489 0.1664 4.8711 37 1 3.0338 -1.5652 5.2664 38 1 5.2683 -0.5445 6.3757 39 1 8.8540 0.4471 5.0239 40 1 7.2610 1.3084 5.1720 41 1 10.4030 -0.0290 6.0271 42 1 10.4023 2.2020 10.4198 43 1 8.2774 1.5030 9.3922 44 1 7.1696 -1.7676 7.4507 45 1 8.7896 -1.7201 6.6294 46 1 3.0582 -3.7956 4.2173 47 1 2.3171 -5.7117 2.8747 48 1 1.3413 -5.3720 0.6443 49 1 1.0904 -3.1185 -0.2683 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650940_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:45:35 Heat of formation + Delta-G solvation = 20.839149 kcal Electronic energy + Delta-G solvation = -35399.196770 eV Core-core repulsion = 30448.315641 eV Total energy + Delta-G solvation = -4950.881129 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 459.063 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -50.04572 -42.53344 -41.77869 -40.44838 -38.97158 -37.99937 -37.51276 -34.84878 -34.01811 -33.62943 -31.91262 -31.25498 -30.48625 -30.13888 -28.98756 -27.01816 -26.49588 -25.59797 -24.27913 -23.67720 -22.95860 -22.60923 -21.90342 -20.64209 -20.45573 -19.04188 -18.71204 -18.48232 -17.82724 -17.71232 -17.32204 -17.10927 -16.83354 -16.76498 -16.34988 -16.32519 -15.96560 -15.71555 -15.67999 -15.34714 -15.08777 -14.85141 -14.79173 -14.62873 -14.49345 -14.40635 -14.21463 -14.07165 -13.95012 -13.82890 -13.64611 -13.49513 -13.24784 -12.61849 -12.59798 -12.48594 -12.26462 -12.22569 -12.13132 -12.02558 -11.76626 -11.69398 -11.56320 -11.37572 -11.17410 -10.44511 -10.34643 -10.23804 -10.14092 -9.71207 -9.04580 -8.55120 -5.04116 -0.30261 -0.15283 0.25672 0.40226 0.76877 1.30463 1.34864 1.40284 1.64330 1.76426 2.01923 2.05765 2.13516 2.92833 3.09053 3.12280 3.30112 3.32784 3.40422 3.43952 3.47420 3.62120 3.64527 3.73441 3.76804 3.78465 3.82811 3.83664 3.99107 4.04862 4.23107 4.29550 4.34705 4.38372 4.44796 4.56359 4.56621 4.62016 4.66041 4.66988 4.69594 4.74226 4.77624 4.81247 4.88252 4.88331 4.96720 5.14829 5.23431 5.31986 5.47529 5.62588 5.78596 5.84027 5.87997 6.08722 6.27272 6.33990 6.74367 6.92943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.069 3.931 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.493 3.507 9 O -0.510 6.510 10 N -0.712 5.712 11 C 0.120 3.880 12 H 0.107 0.893 13 C -0.145 4.145 14 C -0.071 4.071 15 H 0.104 0.896 16 C -0.078 4.078 17 C -0.061 4.061 18 C -0.128 4.128 19 Br -0.025 7.025 20 C 0.124 3.876 21 F -0.123 7.123 22 C -0.144 4.144 23 C -0.071 4.071 24 C -0.136 4.136 25 C 0.109 3.891 26 C -0.128 4.128 27 C -0.096 4.096 28 C -0.145 4.145 29 C -0.066 4.066 30 C -0.087 4.087 31 H 0.376 0.624 32 H 0.111 0.889 33 H -0.256 1.256 34 H -0.255 1.255 35 H 0.171 0.829 36 H 0.124 0.876 37 H 0.119 0.881 38 H 0.403 0.597 39 H 0.096 0.904 40 H 0.078 0.922 41 H 0.143 0.857 42 H 0.146 0.854 43 H 0.140 0.860 44 H 0.081 0.919 45 H 0.100 0.900 46 H 0.115 0.885 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.916 2.184 7.679 8.892 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.583 3.417 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.277 3.723 9 O -0.383 6.383 10 N -0.365 5.365 11 C 0.015 3.985 12 H 0.125 0.875 13 C -0.183 4.183 14 C -0.090 4.090 15 H 0.122 0.878 16 C -0.079 4.079 17 C -0.081 4.081 18 C -0.209 4.209 19 Br 0.060 6.940 20 C 0.102 3.898 21 F -0.101 7.101 22 C -0.163 4.163 23 C -0.089 4.089 24 C -0.174 4.174 25 C 0.004 3.996 26 C -0.149 4.149 27 C -0.116 4.116 28 C -0.164 4.164 29 C -0.084 4.084 30 C -0.091 4.091 31 H 0.223 0.777 32 H 0.128 0.872 33 H -0.180 1.180 34 H -0.179 1.179 35 H 0.188 0.812 36 H 0.142 0.858 37 H 0.137 0.863 38 H 0.237 0.763 39 H 0.114 0.886 40 H 0.096 0.904 41 H 0.161 0.839 42 H 0.164 0.836 43 H 0.158 0.842 44 H 0.099 0.901 45 H 0.118 0.882 46 H 0.133 0.867 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -2.168 2.244 5.863 6.642 hybrid contribution 0.086 -0.285 0.805 0.858 sum -2.082 1.959 6.668 7.255 Atomic orbital electron populations 1.86505 1.17511 1.81753 1.48912 1.24328 0.84627 1.08745 0.96306 0.95437 0.80980 0.77527 0.87726 1.20640 1.10013 0.92391 0.97422 1.21497 1.00964 0.93830 0.89304 1.43191 1.52609 1.04680 1.14512 1.21582 0.90507 1.05963 0.85348 1.21065 0.89548 0.77275 0.84417 1.90827 1.74607 1.45220 1.27653 1.45618 1.06364 1.72365 1.12146 1.21850 0.79322 0.97876 0.99499 0.87515 1.23591 1.01826 0.98373 0.94523 1.21620 0.94631 0.96697 0.96035 0.87779 1.19738 0.94394 0.98945 0.94799 1.20892 0.89532 0.97643 1.00002 1.21994 0.94451 1.07785 0.96671 1.96844 1.25953 1.95051 1.76107 1.17441 0.82456 0.98371 0.91497 1.91584 1.45738 1.88575 1.84238 1.21207 0.90617 1.02858 1.01660 1.21079 0.97955 0.95586 0.94282 1.23455 1.02062 0.95303 0.96542 1.18157 1.01255 0.85847 0.94308 1.19951 1.05004 0.89248 1.00648 1.20827 0.98330 0.97946 0.94467 1.20673 1.02417 0.96939 0.96415 1.20311 0.97963 0.90962 0.99182 1.18945 1.03358 0.92815 0.93947 0.77723 0.87174 1.18046 1.17912 0.81211 0.85777 0.86348 0.76268 0.88561 0.90355 0.83925 0.83582 0.84206 0.90081 0.88182 0.86744 0.85725 0.85932 0.85977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.74 12.88 -35.23 -0.45 -1.20 16 2 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.29 30.75 -169.99 -5.23 -5.52 16 4 C -0.20 -0.41 5.58 -102.71 -0.57 -0.98 16 5 C 0.07 0.01 9.89 -16.74 -0.17 -0.16 16 6 N -0.47 -0.21 2.27 -115.71 -0.26 -0.48 16 7 C 0.09 -0.33 6.48 -5.19 -0.03 -0.36 16 8 C 0.49 -0.54 7.90 -10.99 -0.09 -0.62 16 9 O -0.51 -2.26 16.02 5.56 0.09 -2.17 16 10 N -0.71 2.94 5.26 -53.02 -0.28 2.66 16 11 C 0.12 -0.36 4.32 -67.12 -0.29 -0.65 16 12 H 0.11 -0.05 7.46 -51.93 -0.39 -0.44 16 13 C -0.14 0.49 7.25 -25.92 -0.19 0.30 16 14 C -0.07 0.33 3.86 -90.96 -0.35 -0.02 16 15 H 0.10 -0.65 8.09 -51.93 -0.42 -1.07 16 16 C -0.08 0.22 5.29 -104.62 -0.55 -0.34 16 17 C -0.06 0.08 8.33 -39.56 -0.33 -0.25 16 18 C -0.13 -0.08 6.23 -39.45 -0.25 -0.33 16 19 Br -0.03 -0.04 33.28 -68.01 -2.26 -2.30 16 20 C 0.12 0.11 7.27 -39.40 -0.29 -0.18 16 21 F -0.12 -0.31 16.73 2.25 0.04 -0.27 16 22 C -0.14 0.21 10.03 -39.52 -0.40 -0.19 16 23 C -0.07 0.21 9.71 -39.59 -0.38 -0.17 16 24 C -0.14 0.61 7.29 -25.92 -0.19 0.42 16 25 C 0.11 0.32 6.80 -83.99 -0.57 -0.25 16 26 C -0.13 -0.28 10.00 -39.43 -0.39 -0.67 16 27 C -0.10 -0.19 10.01 -39.54 -0.40 -0.59 16 28 C -0.15 -0.37 9.97 -39.95 -0.40 -0.76 16 29 C -0.07 -0.24 10.05 -39.65 -0.40 -0.63 16 30 C -0.09 -0.34 6.35 -105.14 -0.67 -1.01 16 31 H 0.38 -1.05 8.70 45.56 0.40 -0.65 16 32 H 0.11 0.26 7.96 -51.93 -0.41 -0.16 16 33 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 34 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 35 H 0.17 -0.59 6.34 -52.49 -0.33 -0.93 16 36 H 0.12 -0.89 8.12 -51.93 -0.42 -1.31 16 37 H 0.12 -0.67 8.14 -51.93 -0.42 -1.10 16 38 H 0.40 -2.97 8.70 -40.82 -0.36 -3.33 16 39 H 0.10 -0.29 6.32 -51.93 -0.33 -0.62 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.14 -0.35 6.67 -52.49 -0.35 -0.70 16 42 H 0.15 -0.45 8.06 -52.49 -0.42 -0.88 16 43 H 0.14 -0.77 8.05 -52.49 -0.42 -1.19 16 44 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 45 H 0.10 -0.40 7.71 -51.93 -0.40 -0.80 16 46 H 0.11 0.01 8.06 -52.49 -0.42 -0.41 16 47 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 48 H 0.12 0.08 8.06 -52.48 -0.42 -0.35 16 49 H 0.12 0.34 8.06 -52.48 -0.42 -0.08 16 LS Contribution 435.93 15.07 6.57 6.57 Total: 0.00 -11.99 435.93 -14.59 -26.59 By element: Atomic # 1 Polarization: -10.50 SS G_CDS: -6.02 Total: -16.52 kcal Atomic # 6 Polarization: -0.57 SS G_CDS: -6.79 Total: -7.36 kcal Atomic # 7 Polarization: 2.73 SS G_CDS: -0.54 Total: 2.19 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.36 Total: -3.37 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.04 Total: -0.27 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.23 Total: -5.52 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.26 Total: -2.30 kcal Total LS contribution 6.57 Total: 6.57 kcal Total: -11.99 -14.59 -26.59 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.424 kcal (2) G-P(sol) polarization free energy of solvation -11.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.434 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.595 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.585 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.839 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds