Wall clock time and date at job start Mon Mar 8 2021 06:45:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86305 * 109.47040 * 2 1 4 4 C 1.50702 * 109.47054 * 119.99806 * 2 1 3 5 5 C 1.34236 * 126.50319 * 254.97454 * 4 2 1 6 6 N 1.36824 * 109.93935 * 179.97438 * 5 4 2 7 7 C 1.46509 * 125.06514 * 179.97438 * 6 5 4 8 8 C 1.50698 * 109.47085 * 265.00565 * 7 6 5 9 9 O 1.21277 * 120.00186 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99538 * 179.97438 * 8 7 6 11 11 C 1.46500 * 119.99890 * 180.02562 * 10 8 7 12 12 H 1.08997 * 112.84960 * 336.19116 * 11 10 8 13 13 C 1.53777 * 113.61591 * 107.50219 * 11 10 8 14 14 C 1.53780 * 87.08226 * 89.11646 * 13 11 10 15 15 H 1.09004 * 113.68805 * 270.87125 * 14 13 11 16 16 C 1.50700 * 113.61600 * 139.98345 * 14 13 11 17 17 C 1.38219 * 119.96639 * 322.22531 * 16 14 13 18 18 C 1.38303 * 120.00944 * 179.72780 * 17 16 14 19 19 Br 1.89104 * 120.01990 * 180.27309 * 18 17 16 20 20 C 1.38524 * 119.95927 * 0.52742 * 18 17 16 21 21 F 1.35102 * 120.02880 * 179.73014 * 20 18 17 22 22 C 1.38449 * 119.93875 * 359.74641 * 20 18 17 23 23 C 1.38191 * 119.98821 * 0.02562 * 22 20 18 24 24 C 1.53780 * 113.61381 * 205.00035 * 11 10 8 25 25 C 1.37692 * 109.87585 * 0.02562 * 6 5 4 26 26 C 1.39085 * 133.51567 * 180.02562 * 25 6 5 27 27 C 1.37793 * 119.77920 * 179.97438 * 26 25 6 28 28 C 1.38788 * 120.66312 * 359.97438 * 27 26 25 29 29 C 1.36656 * 120.53190 * 0.02562 * 28 27 26 30 30 C 1.39593 * 119.76054 * 0.02562 * 29 28 27 31 31 H 0.96707 * 114.00082 * 300.00568 * 1 2 3 32 32 H 1.08994 * 109.47308 * 240.00017 * 2 1 3 33 33 H 1.48503 * 109.99838 * 178.67934 * 3 2 1 34 34 H 1.48494 * 110.00215 * 299.99759 * 3 2 1 35 35 H 1.07999 * 125.02769 * 359.97438 * 5 4 2 36 36 H 1.09000 * 109.46481 * 25.00513 * 7 6 5 37 37 H 1.08993 * 109.46878 * 145.00195 * 7 6 5 38 38 H 0.97002 * 120.00534 * 359.97438 * 10 8 7 39 39 H 1.09005 * 113.61280 * 203.66266 * 13 11 10 40 40 H 1.09001 * 113.61693 * 334.56784 * 13 11 10 41 41 H 1.07997 * 119.99703 * 0.02562 * 17 16 14 42 42 H 1.08000 * 120.00719 * 180.02562 * 22 20 18 43 43 H 1.07996 * 119.98264 * 180.02562 * 23 22 20 44 44 H 1.09001 * 113.61698 * 25.42657 * 24 11 10 45 45 H 1.09000 * 113.61643 * 156.33657 * 24 11 10 46 46 H 1.08001 * 120.11475 * 359.71579 * 26 25 6 47 47 H 1.07995 * 119.66646 * 180.02562 * 27 26 25 48 48 H 1.08004 * 119.73682 * 180.02562 * 28 27 26 49 49 H 1.08003 * 120.12056 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4612 -0.1376 2.3228 6 7 2.8025 -1.0989 3.2347 7 6 3.4080 -0.8404 4.5435 8 6 4.9061 -0.9642 4.4372 9 8 5.4177 -1.2416 3.3732 10 7 5.6774 -0.7667 5.5247 11 6 7.1338 -0.8865 5.4213 12 1 7.4487 -1.5145 4.5880 13 6 7.8694 0.4621 5.4912 14 6 7.9087 0.2723 7.0168 15 1 7.0375 0.6781 7.5311 16 6 9.2104 0.6989 7.6448 17 6 10.4038 0.4616 6.9892 18 6 11.5986 0.8578 7.5622 19 35 13.2309 0.5401 6.6619 20 6 11.5992 1.4828 8.7985 21 9 12.7659 1.8655 9.3620 22 6 10.4031 1.7145 9.4561 23 6 9.2103 1.3219 8.8793 24 6 7.8188 -1.2399 6.7520 25 6 2.4932 -2.3456 2.7387 26 6 2.6271 -3.6360 3.2400 27 6 2.2127 -4.7105 2.4835 28 6 1.6615 -4.5191 1.2242 29 6 1.5206 -3.2599 0.7122 30 6 1.9348 -2.1570 1.4611 31 1 -0.3934 0.4418 0.7651 32 1 1.7923 -0.5138 -0.8899 33 1 3.5346 1.7703 0.0322 34 1 1.5615 2.4679 -1.2085 35 1 2.5979 0.9247 2.4613 36 1 3.1489 0.1664 4.8711 37 1 3.0338 -1.5652 5.2664 38 1 5.2683 -0.5445 6.3757 39 1 8.8540 0.4471 5.0239 40 1 7.2610 1.3084 5.1720 41 1 10.4030 -0.0290 6.0271 42 1 10.4023 2.2020 10.4198 43 1 8.2774 1.5030 9.3922 44 1 7.1696 -1.7676 7.4507 45 1 8.7896 -1.7201 6.6294 46 1 3.0582 -3.7956 4.2173 47 1 2.3171 -5.7117 2.8747 48 1 1.3413 -5.3720 0.6443 49 1 1.0904 -3.1185 -0.2683 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:45:33 Heat of formation + Delta-G solvation = 22.670333 kcal Electronic energy + Delta-G solvation = -35399.117364 eV Core-core repulsion = 30448.315641 eV Total energy + Delta-G solvation = -4950.801723 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 459.063 amu Computer time = 1.84 seconds Orbital eigenvalues (eV) -50.08938 -42.52409 -41.57129 -40.34059 -38.81933 -38.07312 -37.55817 -34.71040 -33.97657 -33.54067 -31.80741 -31.24611 -30.42126 -30.22034 -28.91385 -26.70802 -26.35609 -25.53690 -24.13829 -23.73401 -22.90646 -22.52648 -21.80178 -20.65442 -20.22760 -18.93128 -18.59699 -18.45722 -17.71780 -17.69323 -17.26336 -16.97425 -16.86447 -16.58504 -16.41582 -16.22832 -15.98837 -15.59916 -15.56147 -15.36963 -14.97512 -14.82646 -14.69740 -14.65058 -14.39716 -14.37042 -14.08361 -14.05195 -13.90958 -13.66463 -13.50224 -13.34344 -13.06188 -12.70556 -12.57356 -12.38734 -12.25886 -12.12779 -12.11474 -12.03534 -11.81304 -11.57214 -11.43554 -11.26973 -11.13444 -10.54044 -10.30291 -10.13951 -10.02321 -9.60617 -9.14626 -8.61214 -5.05479 -0.18369 -0.00355 0.15216 0.42502 0.63890 1.34797 1.44107 1.48228 1.65318 1.76953 2.00736 2.21128 2.30188 2.95357 3.02401 3.39912 3.56951 3.60045 3.62386 3.64376 3.69098 3.74065 3.77884 3.89329 3.93044 4.04030 4.07290 4.07612 4.20295 4.22743 4.25006 4.31267 4.43289 4.49054 4.56898 4.64362 4.72573 4.75149 4.79513 4.81728 4.82816 4.85733 4.89516 4.96207 5.03314 5.04205 5.14092 5.16122 5.37456 5.51057 5.58849 5.66486 5.66703 5.73888 5.76191 6.21459 6.25730 6.52087 6.89953 7.19209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.042 4.042 3 Si 0.803 3.197 4 C -0.227 4.227 5 C 0.082 3.918 6 N -0.466 5.466 7 C 0.088 3.912 8 C 0.492 3.508 9 O -0.575 6.575 10 N -0.691 5.691 11 C 0.116 3.884 12 H 0.073 0.927 13 C -0.146 4.146 14 C -0.057 4.057 15 H 0.136 0.864 16 C -0.072 4.072 17 C -0.067 4.067 18 C -0.144 4.144 19 Br -0.047 7.047 20 C 0.094 3.906 21 F -0.141 7.141 22 C -0.145 4.145 23 C -0.061 4.061 24 C -0.127 4.127 25 C 0.091 3.909 26 C -0.132 4.132 27 C -0.109 4.109 28 C -0.154 4.154 29 C -0.092 4.092 30 C -0.118 4.118 31 H 0.394 0.606 32 H 0.086 0.914 33 H -0.294 1.294 34 H -0.300 1.300 35 H 0.209 0.791 36 H 0.171 0.829 37 H 0.146 0.854 38 H 0.423 0.577 39 H 0.085 0.915 40 H 0.077 0.923 41 H 0.146 0.854 42 H 0.162 0.838 43 H 0.176 0.824 44 H 0.098 0.902 45 H 0.091 0.909 46 H 0.135 0.865 47 H 0.145 0.855 48 H 0.134 0.866 49 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.705 3.428 10.914 12.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.151 4.151 3 Si 0.709 3.291 4 C -0.235 4.235 5 C -0.044 4.044 6 N -0.148 5.148 7 C -0.036 4.036 8 C 0.278 3.722 9 O -0.453 6.453 10 N -0.345 5.345 11 C 0.010 3.990 12 H 0.092 0.908 13 C -0.185 4.185 14 C -0.075 4.075 15 H 0.154 0.846 16 C -0.074 4.074 17 C -0.087 4.087 18 C -0.225 4.225 19 Br 0.038 6.962 20 C 0.073 3.927 21 F -0.119 7.119 22 C -0.164 4.164 23 C -0.078 4.078 24 C -0.165 4.165 25 C -0.014 4.014 26 C -0.152 4.152 27 C -0.129 4.129 28 C -0.173 4.173 29 C -0.111 4.111 30 C -0.122 4.122 31 H 0.243 0.757 32 H 0.104 0.896 33 H -0.222 1.222 34 H -0.227 1.227 35 H 0.226 0.774 36 H 0.188 0.812 37 H 0.163 0.837 38 H 0.262 0.738 39 H 0.104 0.896 40 H 0.096 0.904 41 H 0.164 0.836 42 H 0.180 0.820 43 H 0.194 0.806 44 H 0.116 0.884 45 H 0.109 0.891 46 H 0.153 0.847 47 H 0.163 0.837 48 H 0.152 0.848 49 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -3.983 3.475 9.192 10.604 hybrid contribution 0.629 -0.701 -0.219 0.967 sum -3.354 2.775 8.974 9.974 Atomic orbital electron populations 1.86454 1.17774 1.82388 1.50228 1.24579 0.84705 1.10423 0.95402 0.94157 0.76598 0.73413 0.84928 1.20784 1.12110 0.91896 0.98686 1.22064 0.98609 0.95375 0.88317 1.43452 1.51879 1.03692 1.15793 1.22041 0.88218 1.09515 0.83845 1.21539 0.90720 0.76046 0.83890 1.90820 1.75858 1.48463 1.30175 1.45433 1.05699 1.70871 1.12447 1.21765 0.80106 0.97804 0.99365 0.90822 1.23565 1.01240 0.97917 0.95758 1.21672 0.94636 0.96317 0.94874 0.84612 1.19984 0.94469 0.98069 0.94836 1.21045 0.89624 0.97686 1.00347 1.22092 0.94232 1.09137 0.97005 1.96801 1.27677 1.95204 1.76487 1.17814 0.82809 0.99916 0.92158 1.91530 1.46879 1.88995 1.84542 1.21498 0.90214 1.02546 1.02183 1.21488 0.98669 0.93859 0.93833 1.23390 1.01754 0.95673 0.95666 1.18375 1.01543 0.87159 0.94316 1.20257 1.04429 0.89049 1.01476 1.21125 0.98328 0.99104 0.94298 1.20901 1.02438 0.96930 0.97071 1.20435 0.99369 0.91906 0.99372 1.19373 1.04001 0.93905 0.94952 0.75674 0.89618 1.22198 1.22741 0.77436 0.81160 0.83657 0.73786 0.89640 0.90446 0.83619 0.82027 0.80623 0.88370 0.89051 0.84673 0.83732 0.84817 0.86768 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.16 12.88 -148.98 -1.92 -4.08 16 2 C -0.04 -0.16 3.06 71.24 0.22 0.06 16 3 Si 0.80 -0.74 30.75 68.60 2.11 1.37 16 4 C -0.23 -1.14 5.58 -18.62 -0.10 -1.24 16 5 C 0.08 -0.07 9.89 83.00 0.82 0.75 16 6 N -0.47 0.20 2.27 -520.00 -1.18 -0.98 16 7 C 0.09 -0.91 6.48 85.63 0.56 -0.36 16 8 C 0.49 -1.88 7.90 87.66 0.69 -1.19 16 9 O -0.58 -5.38 16.02 -3.02 -0.05 -5.43 16 10 N -0.69 7.42 5.26 -440.06 -2.32 5.11 16 11 C 0.12 -0.80 4.32 45.52 0.20 -0.61 16 12 H 0.07 0.03 7.46 -2.39 -0.02 0.02 16 13 C -0.15 1.16 7.25 31.12 0.23 1.38 16 14 C -0.06 0.70 3.86 -11.01 -0.04 0.66 16 15 H 0.14 -2.44 8.09 -2.38 -0.02 -2.46 16 16 C -0.07 0.55 5.29 -19.86 -0.11 0.45 16 17 C -0.07 0.19 8.33 22.28 0.19 0.37 16 18 C -0.14 -0.30 6.23 22.35 0.14 -0.17 16 19 Br -0.05 -0.22 33.28 -20.37 -0.68 -0.90 16 20 C 0.09 0.22 7.27 22.39 0.16 0.38 16 21 F -0.14 -0.92 16.73 44.97 0.75 -0.17 16 22 C -0.15 0.61 10.03 22.31 0.22 0.83 16 23 C -0.06 0.54 9.71 22.27 0.22 0.76 16 24 C -0.13 1.39 7.29 31.12 0.23 1.62 16 25 C 0.09 0.56 6.80 39.03 0.27 0.83 16 26 C -0.13 -0.57 10.00 22.37 0.22 -0.35 16 27 C -0.11 -0.51 10.01 22.30 0.22 -0.28 16 28 C -0.15 -1.07 9.97 22.03 0.22 -0.85 16 29 C -0.09 -0.92 10.05 22.23 0.22 -0.70 16 30 C -0.12 -1.14 6.35 -20.20 -0.13 -1.27 16 31 H 0.39 -2.17 8.70 -74.05 -0.64 -2.81 16 32 H 0.09 0.67 7.96 -2.39 -0.02 0.65 16 33 H -0.29 -1.62 7.11 99.48 0.71 -0.91 16 34 H -0.30 -1.92 7.11 99.48 0.71 -1.21 16 35 H 0.21 -2.07 6.34 -2.91 -0.02 -2.09 16 36 H 0.17 -3.34 8.12 -2.39 -0.02 -3.36 16 37 H 0.15 -2.25 8.14 -2.39 -0.02 -2.26 16 38 H 0.42 -8.07 8.70 -92.71 -0.81 -8.88 16 39 H 0.09 -0.48 6.32 -2.38 -0.02 -0.49 16 40 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 41 H 0.15 -0.60 6.67 -2.91 -0.02 -0.62 16 42 H 0.16 -1.28 8.06 -2.91 -0.02 -1.30 16 43 H 0.18 -2.83 8.05 -2.91 -0.02 -2.86 16 44 H 0.10 -1.36 8.14 -2.39 -0.02 -1.38 16 45 H 0.09 -0.79 7.71 -2.39 -0.02 -0.81 16 46 H 0.14 -0.14 8.06 -2.91 -0.02 -0.17 16 47 H 0.14 -0.07 8.06 -2.91 -0.02 -0.10 16 48 H 0.13 0.41 8.06 -2.91 -0.02 0.39 16 49 H 0.11 1.10 8.06 -2.91 -0.02 1.07 16 Total: 0.00 -35.15 435.93 0.98 -34.17 By element: Atomic # 1 Polarization: -29.78 SS G_CDS: -0.38 Total: -30.16 kcal Atomic # 6 Polarization: -3.58 SS G_CDS: 4.64 Total: 1.06 kcal Atomic # 7 Polarization: 7.62 SS G_CDS: -3.50 Total: 4.13 kcal Atomic # 8 Polarization: -7.54 SS G_CDS: -1.97 Total: -9.51 kcal Atomic # 9 Polarization: -0.92 SS G_CDS: 0.75 Total: -0.17 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: 2.11 Total: 1.37 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.68 Total: -0.90 kcal Total: -35.15 0.98 -34.17 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.839 kcal (2) G-P(sol) polarization free energy of solvation -35.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.693 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.977 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.169 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds