Wall clock time and date at job start Mon Mar 8 2021 04:14:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35898 * 117.00037 * 2 1 4 4 C 1.38748 * 120.02844 * 0.02562 * 3 2 1 5 5 C 1.38200 * 120.05718 * 179.72051 * 4 3 2 6 6 C 1.38156 * 120.10581 * 0.51689 * 5 4 3 7 7 C 1.50697 * 119.97228 * 179.76717 * 6 5 4 8 8 O 1.42906 * 109.46831 * 254.72329 * 7 6 5 9 9 Si 1.86300 * 109.47007 * 14.71718 * 7 6 5 10 10 H 1.48503 * 109.46942 * 60.00611 * 9 7 6 11 11 H 1.48503 * 109.47276 * 180.02562 * 9 7 6 12 12 H 1.48494 * 109.47372 * 300.00074 * 9 7 6 13 13 C 1.38791 * 120.05409 * 359.48303 * 6 5 4 14 14 O 1.35896 * 120.02634 * 180.27722 * 13 6 5 15 15 C 1.42906 * 116.99850 * 180.02562 * 14 13 6 16 16 C 1.50701 * 109.46791 * 179.97438 * 15 14 13 17 17 O 1.21286 * 120.00390 * 0.02562 * 16 15 14 18 18 N 1.34777 * 119.99873 * 179.97438 * 16 15 14 19 19 C 1.46505 * 120.00037 * 179.97438 * 18 16 15 20 20 C 1.52995 * 109.47024 * 180.02562 * 19 18 16 21 21 C 1.53004 * 109.47241 * 180.02562 * 20 19 18 22 22 Si 1.86304 * 109.47093 * 179.97438 * 21 20 19 23 23 C 1.86299 * 109.47109 * 60.00383 * 22 21 20 24 24 C 1.86299 * 109.46913 * 180.02562 * 22 21 20 25 25 C 1.86292 * 109.47341 * 300.00002 * 22 21 20 26 26 C 1.38620 * 119.94745 * 0.25955 * 13 6 5 27 27 H 1.09003 * 109.47090 * 59.99958 * 1 2 3 28 28 H 1.09004 * 109.46855 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47421 * 300.00184 * 1 2 3 30 30 H 1.08008 * 119.97336 * 359.97438 * 4 3 2 31 31 H 1.08000 * 119.94710 * 180.27901 * 5 4 3 32 32 H 1.09000 * 109.47374 * 134.71902 * 7 6 5 33 33 H 0.96693 * 114.00047 * 60.00191 * 8 7 6 34 34 H 1.08993 * 109.47249 * 300.00194 * 15 14 13 35 35 H 1.08995 * 109.46882 * 60.00797 * 15 14 13 36 36 H 0.97002 * 119.99897 * 0.02562 * 18 16 15 37 37 H 1.08993 * 109.47337 * 300.00523 * 19 18 16 38 38 H 1.08995 * 109.46637 * 60.01031 * 19 18 16 39 39 H 1.09003 * 109.47624 * 300.00094 * 20 19 18 40 40 H 1.09003 * 109.47570 * 60.00189 * 20 19 18 41 41 H 1.08993 * 109.47095 * 300.00033 * 21 20 19 42 42 H 1.09007 * 109.46605 * 60.00013 * 21 20 19 43 43 H 1.09003 * 109.47143 * 59.99161 * 23 22 21 44 44 H 1.08994 * 109.47217 * 180.02562 * 23 22 21 45 45 H 1.09006 * 109.47081 * 299.99991 * 23 22 21 46 46 H 1.09003 * 109.46943 * 59.99727 * 24 22 21 47 47 H 1.08989 * 109.47446 * 180.02562 * 24 22 21 48 48 H 1.09004 * 109.47246 * 300.00819 * 24 22 21 49 49 H 1.09009 * 109.47239 * 60.00045 * 25 22 21 50 50 H 1.09003 * 109.47194 * 179.97438 * 25 22 21 51 51 H 1.09007 * 109.47385 * 300.00487 * 25 22 21 52 52 H 1.07995 * 120.05190 * 179.97438 * 26 13 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2909 2.3749 0.0005 5 6 1.9176 3.6065 0.0064 6 6 3.2971 3.6821 0.0009 7 6 3.9774 5.0268 0.0020 8 8 4.5039 5.2953 -1.2992 9 14 2.7438 6.3465 0.4571 10 1 2.1967 6.0675 1.8092 11 1 3.4140 7.6717 0.4576 12 1 1.6372 6.3524 -0.5331 13 6 4.0569 2.5206 0.0004 14 8 5.4138 2.5956 0.0007 15 6 6.1318 1.3601 -0.0005 16 6 7.6127 1.6397 -0.0006 17 8 8.0137 2.7844 0.0007 18 7 8.4914 0.6178 -0.0011 19 6 9.9310 0.8897 -0.0017 20 6 10.6998 -0.4331 -0.0028 21 6 12.2033 -0.1493 -0.0029 22 14 13.1393 -1.7601 -0.0034 23 6 12.6920 -2.7377 -1.5249 24 6 14.9700 -1.4144 -0.0027 25 6 12.6922 -2.7387 1.5173 26 6 3.4305 1.2840 -0.0001 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8899 30 1 0.2123 2.3184 0.0005 31 1 1.3281 4.5115 0.0113 32 1 4.7897 5.0225 0.7288 33 1 3.8355 5.3143 -1.9976 34 1 5.8700 0.7868 0.8888 35 1 5.8704 0.7888 -0.8911 36 1 8.1707 -0.2976 -0.0017 37 1 10.1923 1.4621 -0.8917 38 1 10.1931 1.4617 0.8883 39 1 10.4386 -1.0060 0.8870 40 1 10.4377 -1.0050 -0.8930 41 1 12.4648 0.4237 -0.8924 42 1 12.4650 0.4224 0.8876 43 1 12.9535 -2.1651 -2.4147 44 1 13.2392 -3.6803 -1.5250 45 1 11.6208 -2.9399 -1.5249 46 1 15.2313 -0.8425 0.8877 47 1 15.5177 -2.3567 -0.0035 48 1 15.2319 -0.8415 -0.8923 49 1 11.6210 -2.9410 1.5174 50 1 13.2395 -3.6814 1.5168 51 1 12.9539 -2.1667 2.4076 52 1 4.0201 0.3792 -0.0009 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_4974312.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:14:45 Heat of formation + Delta-G solvation = -166.110760 kcal Electronic energy + Delta-G solvation = -28943.005867 eV Core-core repulsion = 24838.727749 eV Total energy + Delta-G solvation = -4104.278118 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 355.182 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.77411 -40.73910 -39.78468 -38.22724 -36.87986 -36.64814 -33.68667 -32.26638 -31.40964 -29.83292 -29.40507 -28.51263 -28.47407 -28.46686 -26.47313 -26.04240 -23.63195 -22.58296 -22.43903 -21.41526 -19.95004 -18.53643 -17.95692 -17.76508 -17.53423 -17.26339 -16.81241 -16.66251 -16.55622 -16.46029 -15.82396 -15.61894 -15.15587 -15.09171 -14.91646 -14.59038 -14.29357 -14.23065 -14.11877 -13.97706 -13.84757 -13.65693 -13.44799 -13.40415 -13.38988 -13.19629 -13.16703 -13.13555 -13.11430 -12.64588 -12.53217 -12.30228 -12.09139 -11.92457 -11.88954 -11.64307 -11.51735 -10.94124 -10.84532 -10.83857 -10.53949 -10.19404 -10.10647 -9.67619 -9.05635 0.22189 0.34994 1.26482 1.46143 1.48622 1.59390 1.60205 1.76142 1.82810 1.83674 2.00490 2.16609 2.56388 2.60385 2.65515 3.55041 3.65266 3.70483 3.83713 3.91060 3.94021 3.99681 4.03064 4.04352 4.04878 4.14305 4.21443 4.26980 4.39360 4.41242 4.52662 4.61554 4.63181 4.67081 4.69830 4.71186 4.72715 4.72974 4.74271 4.79339 4.95242 5.05579 5.10021 5.24499 5.27296 5.29148 5.38178 5.45512 5.47480 5.50252 5.51216 6.13994 6.32845 6.44023 6.79572 7.18834 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.239 4.239 5 C -0.048 4.048 6 C -0.185 4.185 7 C -0.065 4.065 8 O -0.531 6.531 9 Si 0.948 3.052 10 H -0.250 1.250 11 H -0.252 1.252 12 H -0.253 1.253 13 C 0.195 3.805 14 O -0.270 6.270 15 C 0.036 3.964 16 C 0.514 3.486 17 O -0.508 6.508 18 N -0.730 5.730 19 C 0.120 3.880 20 C -0.121 4.121 21 C -0.412 4.412 22 Si 1.013 2.987 23 C -0.452 4.452 24 C -0.453 4.453 25 C -0.452 4.452 26 C -0.247 4.247 27 H 0.059 0.941 28 H 0.103 0.897 29 H 0.059 0.941 30 H 0.134 0.866 31 H 0.134 0.866 32 H 0.117 0.883 33 H 0.370 0.630 34 H 0.095 0.905 35 H 0.096 0.904 36 H 0.402 0.598 37 H 0.069 0.931 38 H 0.069 0.931 39 H 0.071 0.929 40 H 0.071 0.929 41 H 0.079 0.921 42 H 0.079 0.921 43 H 0.068 0.932 44 H 0.067 0.933 45 H 0.067 0.933 46 H 0.068 0.932 47 H 0.068 0.932 48 H 0.068 0.932 49 H 0.067 0.933 50 H 0.068 0.932 51 H 0.068 0.932 52 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.408 -5.642 0.173 6.137 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.258 4.258 5 C -0.066 4.066 6 C -0.186 4.186 7 C -0.176 4.176 8 O -0.335 6.335 9 Si 0.770 3.230 10 H -0.173 1.173 11 H -0.176 1.176 12 H -0.177 1.177 13 C 0.148 3.852 14 O -0.182 6.182 15 C -0.042 4.042 16 C 0.298 3.702 17 O -0.382 6.382 18 N -0.385 5.385 19 C -0.002 4.002 20 C -0.159 4.159 21 C -0.498 4.498 22 Si 1.209 2.791 23 C -0.559 4.559 24 C -0.560 4.560 25 C -0.559 4.559 26 C -0.266 4.266 27 H 0.077 0.923 28 H 0.121 0.879 29 H 0.077 0.923 30 H 0.152 0.848 31 H 0.151 0.849 32 H 0.135 0.865 33 H 0.216 0.784 34 H 0.113 0.887 35 H 0.114 0.886 36 H 0.236 0.764 37 H 0.088 0.912 38 H 0.088 0.912 39 H 0.090 0.910 40 H 0.090 0.910 41 H 0.098 0.902 42 H 0.098 0.902 43 H 0.087 0.913 44 H 0.087 0.913 45 H 0.087 0.913 46 H 0.087 0.913 47 H 0.087 0.913 48 H 0.087 0.913 49 H 0.087 0.913 50 H 0.087 0.913 51 H 0.087 0.913 52 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -1.934 -4.117 0.739 4.608 hybrid contribution -0.724 -1.125 -0.389 1.393 sum -2.658 -5.243 0.351 5.888 Atomic orbital electron populations 1.23144 0.77637 1.04409 1.01755 1.86074 1.21990 1.26672 1.88025 1.18679 0.91473 0.84348 0.92712 1.21102 1.00416 0.91786 1.12492 1.20743 0.92774 0.97863 0.95189 1.19546 0.92651 0.94666 1.11718 1.24775 1.05920 0.97363 0.89536 1.86616 1.37317 1.93572 1.15979 0.85792 0.77396 0.78780 0.80983 1.17319 1.17591 1.17736 1.18378 0.82057 0.92342 0.92414 1.86272 1.14616 1.29630 1.87634 1.22535 0.90439 0.87084 1.04181 1.19995 0.87309 0.85702 0.77209 1.90807 1.79756 1.20828 1.46778 1.45881 1.06936 1.09104 1.76561 1.21540 0.77887 0.97994 1.02824 1.21427 0.95075 0.96528 1.02824 1.26149 1.01036 1.17249 1.05320 0.79143 0.66702 0.66254 0.66974 1.26173 1.05249 1.08958 1.15493 1.26148 1.20408 1.04991 1.04458 1.26175 1.05246 1.08970 1.15481 1.20404 0.92892 0.97389 1.15959 0.92265 0.87869 0.92253 0.84813 0.84890 0.86494 0.78429 0.88675 0.88644 0.76431 0.91218 0.91232 0.91008 0.90993 0.90204 0.90218 0.91273 0.91330 0.91338 0.91265 0.91290 0.91265 0.91341 0.91328 0.91280 0.84348 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.37 10.49 -19.42 -0.20 -0.57 16 3 C 0.17 0.28 6.68 -39.24 -0.26 0.02 16 4 C -0.24 -0.16 9.04 -39.41 -0.36 -0.51 16 5 C -0.05 -0.04 8.65 -39.63 -0.34 -0.39 16 6 C -0.18 -0.42 5.28 -104.45 -0.55 -0.98 16 7 C -0.07 -0.15 2.38 36.00 0.09 -0.06 16 8 O -0.53 -1.76 12.88 -35.23 -0.45 -2.21 16 9 Si 0.95 0.71 25.48 -169.99 -4.33 -3.62 16 10 H -0.25 -0.28 7.11 56.52 0.40 0.13 16 11 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 12 H -0.25 0.01 6.74 56.52 0.38 0.39 16 13 C 0.19 0.54 6.66 -39.24 -0.26 0.28 16 14 O -0.27 -1.02 9.00 -39.32 -0.35 -1.37 16 15 C 0.04 0.00 5.22 36.01 0.19 0.19 16 16 C 0.51 1.23 7.91 -10.98 -0.09 1.14 16 17 O -0.51 -3.85 16.50 -14.36 -0.24 -4.09 16 18 N -0.73 0.68 5.56 -60.30 -0.33 0.35 16 19 C 0.12 -0.05 5.67 -4.04 -0.02 -0.07 16 20 C -0.12 0.35 4.70 -26.73 -0.13 0.23 16 21 C -0.41 1.17 4.45 37.16 0.17 1.33 16 22 Si 1.01 -3.66 12.19 -169.99 -2.07 -5.73 16 23 C -0.45 1.07 8.65 101.05 0.87 1.94 16 24 C -0.45 0.82 8.65 101.05 0.87 1.70 16 25 C -0.45 1.08 8.65 101.05 0.87 1.95 16 26 C -0.25 -0.38 8.97 -39.29 -0.35 -0.73 16 27 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 28 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 29 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 30 H 0.13 -0.20 6.29 -52.48 -0.33 -0.53 16 31 H 0.13 -0.10 4.87 -52.49 -0.26 -0.36 16 32 H 0.12 0.37 7.82 -51.93 -0.41 -0.04 16 33 H 0.37 -0.21 8.70 45.56 0.40 0.18 16 34 H 0.10 -0.24 7.66 -51.93 -0.40 -0.63 16 35 H 0.10 -0.21 7.66 -51.93 -0.40 -0.61 16 36 H 0.40 -1.73 8.47 -40.82 -0.35 -2.08 16 37 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 38 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 39 H 0.07 -0.27 7.79 -51.93 -0.40 -0.68 16 40 H 0.07 -0.27 7.79 -51.93 -0.40 -0.68 16 41 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 42 H 0.08 -0.21 7.96 -51.92 -0.41 -0.62 16 43 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 44 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 45 H 0.07 -0.18 7.79 -51.93 -0.40 -0.58 16 46 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 47 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 48 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 49 H 0.07 -0.18 7.79 -51.92 -0.40 -0.59 16 50 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 51 H 0.07 -0.14 7.96 -51.92 -0.41 -0.56 16 52 H 0.14 -0.07 6.30 -52.49 -0.33 -0.40 16 LS Contribution 424.78 15.07 6.40 6.40 Total: 0.00 -10.05 424.78 -8.18 -18.23 By element: Atomic # 1 Polarization: -6.07 SS G_CDS: -8.29 Total: -14.36 kcal Atomic # 6 Polarization: 5.28 SS G_CDS: 1.69 Total: 6.97 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -0.33 Total: 0.35 kcal Atomic # 8 Polarization: -7.00 SS G_CDS: -1.25 Total: -8.25 kcal Atomic # 14 Polarization: -2.94 SS G_CDS: -6.40 Total: -9.35 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -10.05 -8.18 -18.23 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_4974312.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.881 kcal (2) G-P(sol) polarization free energy of solvation -10.048 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.929 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.182 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.230 kcal (6) G-S(sol) free energy of system = (1) + (5) -166.111 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds