Wall clock time and date at job start Mon Mar 8 2021 04:27:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86294 * 1 3 3 C 1.86301 * 109.46913 * 2 1 4 4 C 1.86300 * 109.47338 * 240.00380 * 2 1 3 5 5 C 1.86302 * 109.47666 * 120.00174 * 2 1 3 6 6 C 1.52997 * 109.46879 * 59.99774 * 5 2 1 7 7 C 1.53002 * 109.47026 * 180.02562 * 6 5 2 8 8 N 1.46500 * 109.47119 * 180.02562 * 7 6 5 9 9 C 1.34777 * 120.00253 * 179.97438 * 8 7 6 10 10 O 1.21282 * 119.99517 * 0.02562 * 9 8 7 11 11 C 1.50696 * 120.00401 * 180.02562 * 9 8 7 12 12 N 1.46497 * 109.47264 * 180.02562 * 11 9 8 13 13 C 1.36838 * 125.05962 * 264.97485 * 12 11 9 14 14 C 1.34235 * 109.93800 * 180.02562 * 13 12 11 15 15 C 1.50692 * 126.50345 * 180.02562 * 14 13 12 16 16 O 1.42898 * 109.47457 * 104.96913 * 15 14 13 17 17 Si 1.86305 * 109.47067 * 344.97200 * 15 14 13 18 18 H 1.48501 * 109.47060 * 60.00119 * 17 15 14 19 19 H 1.48503 * 109.47195 * 179.97438 * 17 15 14 20 20 H 1.48500 * 109.47092 * 299.99928 * 17 15 14 21 21 C 1.46498 * 106.99657 * 359.77818 * 14 13 12 22 22 C 1.39590 * 134.02707 * 179.57964 * 21 14 13 23 23 C 1.36668 * 119.76122 * 180.37212 * 22 21 14 24 24 C 1.38785 * 120.52395 * 0.26101 * 23 22 21 25 25 C 1.37786 * 120.67117 * 359.97001 * 24 23 22 26 26 C 1.37687 * 125.06449 * 85.00068 * 12 11 9 27 27 H 1.09000 * 109.47397 * 299.99206 * 1 2 3 28 28 H 1.08997 * 109.47440 * 60.00219 * 1 2 3 29 29 H 1.09008 * 109.46849 * 180.02562 * 1 2 3 30 30 H 1.09002 * 109.47040 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.47412 * 300.00074 * 3 2 1 32 32 H 1.09005 * 109.46888 * 60.00394 * 3 2 1 33 33 H 1.09004 * 109.47220 * 299.99895 * 4 2 1 34 34 H 1.09007 * 109.46967 * 59.99773 * 4 2 1 35 35 H 1.08996 * 109.47318 * 179.97438 * 4 2 1 36 36 H 1.09004 * 109.46626 * 300.00298 * 5 2 1 37 37 H 1.08996 * 109.47262 * 180.02562 * 5 2 1 38 38 H 1.09004 * 109.47064 * 60.00792 * 6 5 2 39 39 H 1.08996 * 109.47580 * 300.00303 * 6 5 2 40 40 H 1.08991 * 109.47332 * 60.00563 * 7 6 5 41 41 H 1.08996 * 109.46993 * 300.00423 * 7 6 5 42 42 H 0.96997 * 120.00212 * 0.02562 * 8 7 6 43 43 H 1.09005 * 109.47029 * 59.99929 * 11 9 8 44 44 H 1.09002 * 109.46874 * 300.00441 * 11 9 8 45 45 H 1.07997 * 125.03385 * 0.04175 * 13 12 11 46 46 H 1.08998 * 109.47154 * 224.97146 * 15 14 13 47 47 H 0.96700 * 114.00375 * 300.00408 * 16 15 14 48 48 H 1.08002 * 120.12275 * 0.65785 * 22 21 14 49 49 H 1.07995 * 119.73473 * 180.27672 * 23 22 21 50 50 H 1.08005 * 119.66135 * 179.97438 * 24 23 22 51 51 H 1.08002 * 120.10859 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8629 0.0000 0.0000 3 6 2.4839 1.7565 0.0000 4 6 2.4840 -0.8781 -1.5212 5 6 2.4841 -0.8783 1.5211 6 6 1.9741 -2.3207 1.5210 7 6 2.4837 -3.0418 2.7705 8 7 1.9959 -4.4232 2.7702 9 6 2.3216 -5.2532 3.7809 10 8 3.0183 -4.8563 4.6909 11 6 1.8203 -6.6744 3.7803 12 7 2.3082 -7.3648 4.9768 13 6 3.4355 -8.1384 5.0331 14 6 3.5961 -8.6235 6.2744 15 6 4.7126 -9.5167 6.7503 16 8 5.6292 -8.7548 7.5384 17 14 5.6044 -10.2330 5.2797 18 1 6.1676 -9.1319 4.4578 19 1 6.7051 -11.1128 5.7486 20 1 4.6519 -11.0249 4.4606 21 6 2.4833 -8.1151 7.0802 22 6 2.1010 -8.2700 8.4138 23 6 0.9718 -7.6515 8.8721 24 6 0.1987 -6.8746 8.0206 25 6 0.5551 -6.7121 6.6996 26 6 1.7004 -7.3323 6.2118 27 1 -0.3634 0.5137 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0278 0.0005 30 1 3.5739 1.7565 0.0005 31 1 2.1206 2.2703 -0.8899 32 1 2.1206 2.2703 0.8901 33 1 2.1207 -1.9058 -1.5213 34 1 2.1206 -0.3642 -2.4112 35 1 3.5740 -0.8777 -1.5214 36 1 2.1207 -0.3644 2.4111 37 1 3.5741 -0.8778 1.5212 38 1 2.3375 -2.8346 0.6310 39 1 0.8842 -2.3208 1.5211 40 1 2.1201 -2.5280 3.6603 41 1 3.5737 -3.0418 2.7709 42 1 1.4391 -4.7408 2.0423 43 1 2.1844 -7.1877 2.8903 44 1 0.7303 -6.6751 3.7798 45 1 4.0980 -8.3301 4.2021 46 1 4.2992 -10.3250 7.3536 47 1 6.0365 -8.0168 7.0645 48 1 2.6980 -8.8728 9.0822 49 1 0.6788 -7.7680 9.9050 50 1 -0.6912 -6.3924 8.3974 51 1 -0.0529 -6.1051 6.0451 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:27:39 Heat of formation + Delta-G solvation = -58.230329 kcal Electronic energy + Delta-G solvation = -27859.020666 eV Core-core repulsion = 24074.906786 eV Total energy + Delta-G solvation = -3784.113879 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 348.178 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.45267 -40.60418 -37.98548 -37.56758 -36.81155 -34.17562 -33.55204 -31.34976 -30.11347 -29.69361 -29.09377 -28.53060 -28.51952 -26.87610 -25.38958 -23.59813 -22.72540 -22.53124 -21.53862 -20.55897 -18.62231 -18.39679 -17.77848 -17.32610 -16.87265 -16.72170 -16.31278 -16.01004 -15.84567 -15.50698 -15.37907 -14.71688 -14.62360 -14.51632 -14.45983 -14.30628 -14.22605 -14.20604 -14.02656 -13.80999 -13.53640 -13.50073 -13.33145 -13.22244 -13.19314 -13.12900 -12.73105 -12.58380 -12.41715 -12.28578 -12.08725 -11.97709 -11.82023 -11.58666 -11.15809 -10.91804 -10.90273 -10.65992 -10.38465 -10.22600 -10.18509 -9.00102 -8.50515 0.29932 0.82203 1.24832 1.41830 1.43266 1.47941 1.57806 1.68477 1.74361 1.76554 1.77927 1.97921 2.18679 2.53118 3.14342 3.48835 3.50711 3.67215 3.77118 3.82643 3.87198 3.89024 3.96253 4.11354 4.13184 4.33776 4.39769 4.52769 4.56094 4.61254 4.62080 4.64202 4.65626 4.67121 4.67699 4.68072 4.74884 4.82914 4.85639 4.92869 5.01416 5.01873 5.18415 5.28103 5.29602 5.39673 5.44672 5.46163 5.67047 5.83340 5.89027 5.92650 6.17716 6.33964 6.39512 6.77069 7.03592 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 1.013 2.987 3 C -0.453 4.453 4 C -0.451 4.451 5 C -0.412 4.412 6 C -0.120 4.120 7 C 0.119 3.881 8 N -0.730 5.730 9 C 0.488 3.512 10 O -0.514 6.514 11 C 0.091 3.909 12 N -0.466 5.466 13 C 0.060 3.940 14 C -0.196 4.196 15 C -0.042 4.042 16 O -0.540 6.540 17 Si 0.945 3.055 18 H -0.254 1.254 19 H -0.251 1.251 20 H -0.250 1.250 21 C -0.084 4.084 22 C -0.064 4.064 23 C -0.146 4.146 24 C -0.097 4.097 25 C -0.128 4.128 26 C 0.109 3.891 27 H 0.068 0.932 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.067 0.933 34 H 0.068 0.932 35 H 0.068 0.932 36 H 0.079 0.921 37 H 0.079 0.921 38 H 0.071 0.929 39 H 0.071 0.929 40 H 0.068 0.932 41 H 0.068 0.932 42 H 0.402 0.598 43 H 0.122 0.878 44 H 0.118 0.882 45 H 0.165 0.835 46 H 0.113 0.887 47 H 0.375 0.625 48 H 0.124 0.876 49 H 0.123 0.877 50 H 0.125 0.875 51 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.996 0.810 -6.402 7.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.209 2.791 3 C -0.560 4.560 4 C -0.558 4.558 5 C -0.498 4.498 6 C -0.158 4.158 7 C -0.004 4.004 8 N -0.384 5.384 9 C 0.272 3.728 10 O -0.388 6.388 11 C -0.035 4.035 12 N -0.149 5.149 13 C -0.065 4.065 14 C -0.204 4.204 15 C -0.154 4.154 16 O -0.345 6.345 17 Si 0.768 3.232 18 H -0.178 1.178 19 H -0.174 1.174 20 H -0.174 1.174 21 C -0.089 4.089 22 C -0.083 4.083 23 C -0.165 4.165 24 C -0.116 4.116 25 C -0.149 4.149 26 C 0.004 3.996 27 H 0.087 0.913 28 H 0.087 0.913 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.088 0.912 32 H 0.087 0.913 33 H 0.086 0.914 34 H 0.087 0.913 35 H 0.087 0.913 36 H 0.098 0.902 37 H 0.097 0.903 38 H 0.090 0.910 39 H 0.090 0.910 40 H 0.086 0.914 41 H 0.086 0.914 42 H 0.236 0.764 43 H 0.140 0.860 44 H 0.136 0.864 45 H 0.182 0.818 46 H 0.131 0.869 47 H 0.222 0.778 48 H 0.142 0.858 49 H 0.141 0.859 50 H 0.142 0.858 51 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -2.293 0.455 -6.258 6.680 hybrid contribution -0.434 0.689 -0.591 1.006 sum -2.728 1.144 -6.849 7.460 Atomic orbital electron populations 1.26170 1.20917 1.04305 1.04464 0.79150 0.66905 0.66773 0.66282 1.26149 1.06292 1.19120 1.04463 1.26170 1.06263 1.07935 1.15476 1.26148 1.06199 1.01214 1.16204 1.21421 1.01313 0.95814 0.97245 1.21535 0.99585 0.80218 0.99060 1.46029 1.54299 1.12849 1.25221 1.21011 0.81358 0.87877 0.82559 1.90816 1.36403 1.76586 1.34997 1.21596 1.02123 0.90991 0.88832 1.43188 1.22198 1.41993 1.07517 1.21544 0.90134 0.96218 0.98631 1.20637 0.99873 1.07099 0.92786 1.24252 0.90346 0.96139 1.04646 1.86501 1.59420 1.47056 1.41511 0.85831 0.80311 0.80521 0.76587 1.17809 1.17401 1.17378 1.18915 0.95497 1.00823 0.93616 1.20319 0.96052 0.98596 0.93290 1.20673 0.96104 0.99784 0.99956 1.20823 0.99665 0.98615 0.92473 1.19949 0.95962 1.02613 0.96358 1.18176 0.96213 1.00760 0.84437 0.91275 0.91276 0.91362 0.91265 0.91245 0.91257 0.91364 0.91280 0.91287 0.90240 0.90254 0.91028 0.91016 0.91356 0.91388 0.76427 0.86038 0.86401 0.81779 0.86866 0.77841 0.85765 0.85906 0.85754 0.86795 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.25 8.65 101.05 0.87 2.12 16 2 Si 1.01 -4.04 12.19 -169.99 -2.07 -6.11 16 3 C -0.45 0.96 8.65 101.05 0.87 1.83 16 4 C -0.45 1.27 8.65 101.05 0.87 2.14 16 5 C -0.41 1.34 4.45 37.16 0.17 1.51 16 6 C -0.12 0.42 4.70 -26.73 -0.13 0.30 16 7 C 0.12 -0.14 5.67 -4.04 -0.02 -0.16 16 8 N -0.73 1.58 5.56 -60.30 -0.33 1.24 16 9 C 0.49 0.35 7.90 -10.99 -0.09 0.26 16 10 O -0.51 -3.08 16.42 5.56 0.09 -2.98 16 11 C 0.09 -0.17 6.48 -5.20 -0.03 -0.20 16 12 N -0.47 -0.91 2.27 -115.71 -0.26 -1.17 16 13 C 0.06 0.10 9.89 -16.73 -0.17 -0.06 16 14 C -0.20 -0.57 5.57 -102.71 -0.57 -1.14 16 15 C -0.04 -0.06 3.06 36.00 0.11 0.05 16 16 O -0.54 -1.37 12.88 -35.23 -0.45 -1.82 16 17 Si 0.95 0.03 26.08 -169.99 -4.43 -4.40 16 18 H -0.25 0.02 7.03 56.52 0.40 0.41 16 19 H -0.25 -0.36 7.11 56.52 0.40 0.05 16 20 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 21 C -0.08 -0.38 6.35 -105.13 -0.67 -1.05 16 22 C -0.06 -0.24 10.05 -39.64 -0.40 -0.64 16 23 C -0.15 -0.41 9.97 -39.95 -0.40 -0.81 16 24 C -0.10 -0.24 10.01 -39.54 -0.40 -0.64 16 25 C -0.13 -0.38 10.00 -39.43 -0.39 -0.77 16 26 C 0.11 0.43 6.80 -83.99 -0.57 -0.14 16 27 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 28 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 29 H 0.07 -0.21 7.79 -51.92 -0.40 -0.61 16 30 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 31 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 33 H 0.07 -0.21 7.79 -51.93 -0.40 -0.62 16 34 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 35 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 36 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 37 H 0.08 -0.23 7.96 -51.93 -0.41 -0.65 16 38 H 0.07 -0.32 7.79 -51.93 -0.40 -0.72 16 39 H 0.07 -0.31 7.79 -51.93 -0.40 -0.72 16 40 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 42 H 0.40 -2.22 8.47 -40.82 -0.35 -2.56 16 43 H 0.12 -0.62 8.12 -51.93 -0.42 -1.04 16 44 H 0.12 -0.48 8.14 -51.93 -0.42 -0.91 16 45 H 0.17 -0.16 6.29 -52.49 -0.33 -0.49 16 46 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 47 H 0.37 -0.07 8.70 45.56 0.40 0.32 16 48 H 0.12 0.33 8.06 -52.49 -0.42 -0.09 16 49 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 50 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 51 H 0.11 0.12 8.06 -52.49 -0.42 -0.30 16 LS Contribution 422.55 15.07 6.37 6.37 Total: 0.00 -10.07 422.55 -10.25 -20.32 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -8.21 Total: -14.03 kcal Atomic # 6 Polarization: 3.53 SS G_CDS: -0.93 Total: 2.60 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.60 Total: 0.07 kcal Atomic # 8 Polarization: -4.45 SS G_CDS: -0.36 Total: -4.81 kcal Atomic # 14 Polarization: -4.01 SS G_CDS: -6.51 Total: -10.51 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -10.07 -10.25 -20.32 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.915 kcal (2) G-P(sol) polarization free energy of solvation -10.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.983 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.248 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.315 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.230 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds