Wall clock time and date at job start Mon Mar 8 2021 05:10:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.37939 * 119.92548 * 299.72576 * 4 2 1 6 6 C 1.39599 * 119.87811 * 179.74838 * 5 4 2 7 7 C 1.47839 * 120.14355 * 180.29730 * 6 5 4 8 8 O 1.21556 * 120.00011 * 0.22601 * 7 6 5 9 9 N 1.34777 * 120.00034 * 180.23197 * 7 6 5 10 10 C 1.46504 * 119.99960 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.85301 * 23.79955 * 10 9 7 12 12 C 1.53777 * 113.61675 * 155.00166 * 10 9 7 13 13 C 1.53778 * 87.08661 * 89.11286 * 12 10 9 14 14 H 1.08998 * 113.61360 * 270.88719 * 13 12 10 15 15 C 1.50694 * 113.61565 * 140.06332 * 13 12 10 16 16 C 1.38233 * 120.00207 * 299.73112 * 15 13 12 17 17 C 1.38235 * 119.99877 * 179.81207 * 16 15 13 18 18 C 1.38236 * 119.99923 * 0.41582 * 17 16 15 19 19 C 1.50702 * 119.99877 * 179.79614 * 18 17 16 20 20 F 1.39905 * 109.47077 * 270.01887 * 19 18 17 21 21 F 1.39902 * 109.47221 * 30.01781 * 19 18 17 22 22 F 1.39894 * 109.47335 * 150.02371 * 19 18 17 23 23 C 1.38232 * 120.00197 * 359.81355 * 18 17 16 24 24 C 1.38232 * 120.00121 * 0.02562 * 23 18 17 25 25 C 1.53785 * 87.07977 * 25.43255 * 13 12 10 26 26 C 1.39547 * 119.71705 * 0.52632 * 6 5 4 27 27 C 1.38076 * 119.84136 * 359.75008 * 26 6 5 28 28 Br 1.89105 * 119.93716 * 180.02562 * 27 26 6 29 29 C 1.38370 * 119.91978 * 120.00477 * 4 2 1 30 30 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 31 31 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 32 32 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 33 33 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 34 34 H 1.08002 * 120.05809 * 0.02562 * 5 4 2 35 35 H 0.96998 * 120.00301 * 359.97438 * 9 7 6 36 36 H 1.08997 * 113.61581 * 203.66694 * 12 10 9 37 37 H 1.09005 * 113.61101 * 334.47683 * 12 10 9 38 38 H 1.07995 * 120.00234 * 359.97438 * 16 15 13 39 39 H 1.08003 * 120.00168 * 180.21211 * 17 16 15 40 40 H 1.07999 * 120.00200 * 179.97438 * 23 18 17 41 41 H 1.07998 * 120.00092 * 179.97438 * 24 23 18 42 42 H 1.09000 * 113.61848 * 220.01988 * 25 13 12 43 43 H 1.09000 * 113.61092 * 89.11292 * 25 13 12 44 44 H 1.08001 * 120.07699 * 179.73140 * 26 6 5 45 45 H 1.07991 * 119.86014 * 359.95382 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6018 -2.0327 -1.4443 6 6 2.0633 -2.6884 -2.5870 7 6 1.7083 -4.1036 -2.8253 8 8 1.0097 -4.6976 -2.0274 9 7 2.1594 -4.7351 -3.9272 10 6 1.8071 -6.1374 -4.1637 11 1 0.8917 -6.4359 -3.6527 12 6 1.8437 -6.5401 -5.6474 13 6 3.3252 -6.8927 -5.4341 14 1 4.0023 -6.0559 -5.6055 15 6 3.7553 -8.1490 -6.1467 16 6 3.1483 -9.3547 -5.8491 17 6 3.5402 -10.5064 -6.5056 18 6 4.5451 -10.4538 -7.4534 19 6 4.9755 -11.7101 -8.1657 20 9 6.0064 -12.3242 -7.4463 21 9 3.8892 -12.5862 -8.2637 22 9 5.4307 -11.3864 -9.4483 23 6 5.1554 -9.2489 -7.7475 24 6 4.7613 -8.0966 -7.0935 25 6 2.9786 -7.1110 -3.9518 26 6 2.8652 -2.0037 -3.5010 27 6 3.1927 -0.6819 -3.2726 28 35 4.2785 0.2488 -4.5098 29 6 2.7268 -0.0365 -2.1401 30 1 -0.3934 0.4417 -0.7651 31 1 1.7923 -0.5139 0.8900 32 1 1.5879 2.4585 -1.2243 33 1 1.5615 2.4679 1.2085 34 1 0.9842 -2.5585 -0.7311 35 1 2.7166 -4.2611 -4.5641 36 1 1.2189 -7.4020 -5.8814 37 1 1.6861 -5.7052 -6.3303 38 1 2.3660 -9.3965 -5.1058 39 1 3.0636 -11.4479 -6.2756 40 1 5.9408 -9.2078 -8.4877 41 1 5.2384 -7.1553 -7.3230 42 1 3.7386 -6.7369 -3.2659 43 1 2.6641 -8.1291 -3.7223 44 1 3.2291 -2.5065 -4.3849 45 1 2.9849 0.9976 -1.9661 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:10:10 Heat of formation + Delta-G solvation = -129.569729 kcal Electronic energy + Delta-G solvation = -34766.558371 eV Core-core repulsion = 29347.662884 eV Total energy + Delta-G solvation = -5418.895487 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 456.033 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -51.09688 -48.61780 -48.55659 -42.01098 -41.22805 -40.14271 -38.97156 -37.86554 -35.04546 -33.71368 -33.40202 -32.47780 -32.17490 -30.56363 -28.06543 -27.14124 -26.97166 -25.91843 -24.78028 -24.08934 -22.92233 -22.53454 -21.75284 -20.44772 -19.58708 -19.41816 -19.34481 -19.22595 -18.03622 -17.93191 -17.40339 -17.15800 -16.72213 -16.49625 -16.37822 -16.12481 -15.95946 -15.79728 -15.46934 -15.43224 -15.27735 -15.04751 -15.01948 -14.85638 -14.79646 -14.71610 -14.56990 -14.53538 -14.29877 -14.26133 -14.19126 -13.70386 -13.41321 -13.35603 -13.09150 -12.83521 -12.56958 -12.35600 -12.12548 -12.07567 -11.98049 -11.88925 -11.55861 -11.46733 -11.19647 -10.79985 -10.44468 -10.25876 -10.19739 -10.07456 -10.00514 -5.10980 -0.60054 -0.26760 -0.24556 0.12466 0.31809 1.08397 1.44842 1.48386 1.68533 1.78462 1.86280 2.27520 2.39866 2.73497 3.03071 3.10882 3.18071 3.19770 3.30779 3.39316 3.43304 3.48008 3.62319 3.65760 3.71300 3.73656 3.75218 3.87124 3.93764 4.11465 4.12079 4.16446 4.23506 4.40177 4.42859 4.48106 4.53225 4.61460 4.62974 4.66182 4.77358 4.80624 4.83390 4.87428 4.98956 5.03641 5.05183 5.25437 5.31276 5.40801 5.60326 6.22316 6.23885 6.97445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.679 3.321 4 C -0.117 4.117 5 C -0.017 4.017 6 C -0.128 4.128 7 C 0.565 3.435 8 O -0.523 6.523 9 N -0.709 5.709 10 C 0.120 3.880 11 H 0.110 0.890 12 C -0.135 4.135 13 C -0.080 4.080 14 H 0.102 0.898 15 C -0.038 4.038 16 C -0.118 4.118 17 C -0.066 4.066 18 C -0.187 4.187 19 C 0.508 3.492 20 F -0.176 7.176 21 F -0.177 7.177 22 F -0.177 7.177 23 C -0.067 4.067 24 C -0.117 4.117 25 C -0.143 4.143 26 C -0.053 4.053 27 C -0.094 4.094 28 Br -0.032 7.032 29 C -0.063 4.063 30 H 0.378 0.622 31 H 0.126 0.874 32 H -0.255 1.255 33 H -0.250 1.250 34 H 0.149 0.851 35 H 0.401 0.599 36 H 0.102 0.898 37 H 0.080 0.920 38 H 0.136 0.864 39 H 0.137 0.863 40 H 0.136 0.864 41 H 0.135 0.865 42 H 0.078 0.922 43 H 0.099 0.901 44 H 0.138 0.862 45 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.281 3.665 -1.001 4.431 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.184 4.184 3 Si 0.579 3.421 4 C -0.119 4.119 5 C -0.036 4.036 6 C -0.132 4.132 7 C 0.352 3.648 8 O -0.399 6.399 9 N -0.361 5.361 10 C 0.014 3.986 11 H 0.128 0.872 12 C -0.173 4.173 13 C -0.098 4.098 14 H 0.120 0.880 15 C -0.038 4.038 16 C -0.136 4.136 17 C -0.084 4.084 18 C -0.188 4.188 19 C 0.453 3.547 20 F -0.158 7.158 21 F -0.158 7.158 22 F -0.158 7.158 23 C -0.085 4.085 24 C -0.135 4.135 25 C -0.182 4.182 26 C -0.074 4.074 27 C -0.174 4.174 28 Br 0.054 6.946 29 C -0.082 4.082 30 H 0.225 0.775 31 H 0.144 0.856 32 H -0.180 1.180 33 H -0.174 1.174 34 H 0.167 0.833 35 H 0.237 0.763 36 H 0.120 0.880 37 H 0.099 0.901 38 H 0.154 0.846 39 H 0.155 0.845 40 H 0.154 0.846 41 H 0.152 0.848 42 H 0.097 0.903 43 H 0.117 0.883 44 H 0.156 0.844 45 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.063 4.069 -0.363 4.577 hybrid contribution -0.746 -0.464 -0.921 1.273 sum 1.317 3.606 -1.285 4.048 Atomic orbital electron populations 1.86646 1.17149 1.79880 1.49364 1.25056 0.84366 1.11065 0.97872 0.95098 0.91613 0.74274 0.81079 1.20331 0.99252 0.94781 0.97491 1.21304 0.94331 0.92905 0.95045 1.19930 1.01978 0.94190 0.97149 1.18092 0.79598 0.85825 0.81279 1.90835 1.37036 1.67100 1.44928 1.45571 1.53624 1.12349 1.24537 1.21885 0.99310 0.80428 0.96950 0.87202 1.23439 0.95362 1.02649 0.95809 1.21716 0.97120 0.95277 0.95723 0.87970 1.19939 0.94373 0.94710 0.94825 1.21027 1.00806 0.91423 1.00369 1.20971 0.94329 0.99757 0.93356 1.19997 1.02966 0.92896 1.02961 1.18322 0.75031 0.84209 0.77098 1.93243 1.60020 1.84679 1.77809 1.93203 1.54813 1.71701 1.96093 1.93200 1.89367 1.92587 1.40673 1.20977 0.98185 0.91106 0.98208 1.21072 0.97491 0.98375 0.96525 1.23588 0.98680 1.00656 0.95249 1.21275 0.95159 0.92565 0.98400 1.21647 1.02974 0.95608 0.97160 1.96855 1.65720 1.75407 1.56630 1.21232 0.95071 1.00006 0.91921 0.77456 0.85604 1.17979 1.17447 0.83327 0.76332 0.87987 0.90137 0.84582 0.84524 0.84567 0.84756 0.90302 0.88304 0.84427 0.84012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.07 12.77 -35.23 -0.45 -0.52 16 2 C -0.07 0.11 2.82 36.01 0.10 0.21 16 3 Si 0.68 -1.44 29.78 -169.99 -5.06 -6.50 16 4 C -0.12 0.15 5.38 -104.68 -0.56 -0.41 16 5 C -0.02 0.00 9.16 -39.18 -0.36 -0.36 16 6 C -0.13 0.07 5.87 -104.97 -0.62 -0.55 16 7 C 0.57 0.39 7.77 -12.33 -0.10 0.30 16 8 O -0.52 -2.37 15.95 5.32 0.08 -2.29 16 9 N -0.71 1.62 5.21 -53.96 -0.28 1.34 16 10 C 0.12 -0.29 4.32 -67.11 -0.29 -0.58 16 11 H 0.11 -0.07 7.46 -51.93 -0.39 -0.46 16 12 C -0.13 0.53 7.29 -25.92 -0.19 0.34 16 13 C -0.08 0.31 3.85 -90.96 -0.35 -0.04 16 14 H 0.10 -0.50 8.09 -51.93 -0.42 -0.92 16 15 C -0.04 0.09 5.29 -104.62 -0.55 -0.47 16 16 C -0.12 0.23 8.63 -39.58 -0.34 -0.11 16 17 C -0.07 0.05 9.40 -39.58 -0.37 -0.32 16 18 C -0.19 -0.05 5.45 -104.62 -0.57 -0.62 16 19 C 0.51 0.75 3.36 36.01 0.12 0.87 16 20 F -0.18 -0.43 17.30 2.25 0.04 -0.39 16 21 F -0.18 -0.36 16.46 2.25 0.04 -0.32 16 22 F -0.18 -0.36 16.46 2.25 0.04 -0.32 16 23 C -0.07 0.05 9.40 -39.59 -0.37 -0.32 16 24 C -0.12 0.23 9.71 -39.58 -0.38 -0.15 16 25 C -0.14 0.42 7.26 -25.91 -0.19 0.23 16 26 C -0.05 0.12 9.28 -39.15 -0.36 -0.25 16 27 C -0.09 0.15 6.22 -39.57 -0.25 -0.10 16 28 Br -0.03 0.05 33.69 -68.01 -2.29 -2.24 16 29 C -0.06 0.11 8.41 -39.46 -0.33 -0.22 16 30 H 0.38 -1.03 8.70 45.56 0.40 -0.64 16 31 H 0.13 -0.29 7.96 -51.93 -0.41 -0.70 16 32 H -0.26 0.08 7.11 56.52 0.40 0.48 16 33 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 34 H 0.15 0.15 7.65 -52.49 -0.40 -0.26 16 35 H 0.40 -1.91 6.74 -40.82 -0.27 -2.18 16 36 H 0.10 -0.41 7.73 -51.93 -0.40 -0.81 16 37 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 38 H 0.14 -0.50 6.65 -52.49 -0.35 -0.85 16 39 H 0.14 -0.25 7.60 -52.48 -0.40 -0.65 16 40 H 0.14 -0.25 7.60 -52.49 -0.40 -0.65 16 41 H 0.13 -0.53 8.05 -52.49 -0.42 -0.95 16 42 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 43 H 0.10 -0.33 6.31 -51.93 -0.33 -0.65 16 44 H 0.14 -0.63 6.40 -52.49 -0.34 -0.96 16 45 H 0.14 -0.43 4.86 -52.49 -0.26 -0.69 16 LS Contribution 408.82 15.07 6.16 6.16 Total: 0.00 -7.66 408.82 -12.12 -19.78 By element: Atomic # 1 Polarization: -7.72 SS G_CDS: -4.43 Total: -12.16 kcal Atomic # 6 Polarization: 3.43 SS G_CDS: -5.96 Total: -2.54 kcal Atomic # 7 Polarization: 1.62 SS G_CDS: -0.28 Total: 1.34 kcal Atomic # 8 Polarization: -2.44 SS G_CDS: -0.37 Total: -2.81 kcal Atomic # 9 Polarization: -1.15 SS G_CDS: 0.11 Total: -1.04 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.06 Total: -6.50 kcal Atomic # 35 Polarization: 0.05 SS G_CDS: -2.29 Total: -2.24 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -7.66 -12.12 -19.78 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.786 kcal (2) G-P(sol) polarization free energy of solvation -7.659 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.445 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.784 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.570 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds