Wall clock time and date at job start Mon Mar 8 2021 05:10:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86294 * 109.47329 * 2 1 4 4 C 1.50703 * 109.46721 * 119.99918 * 2 1 3 5 5 C 1.38400 * 119.82782 * 64.99880 * 4 2 1 6 6 C 1.37890 * 120.17346 * 180.02562 * 5 4 2 7 7 C 1.39834 * 119.82326 * 359.97438 * 6 5 4 8 8 C 1.47205 * 120.17032 * 179.97438 * 7 6 5 9 9 C 1.34813 * 119.99983 * 179.72060 * 8 7 6 10 10 C 1.46432 * 119.99999 * 180.27347 * 9 8 7 11 11 O 1.21693 * 119.99909 * 0.02562 * 10 9 8 12 12 N 1.34777 * 120.00077 * 179.97438 * 10 9 8 13 13 C 1.46495 * 119.99667 * 179.97438 * 12 10 9 14 14 H 1.09001 * 112.85392 * 23.81205 * 13 12 10 15 15 C 1.53788 * 113.61183 * 155.00275 * 13 12 10 16 16 C 1.53785 * 87.08148 * 89.11525 * 15 13 12 17 17 H 1.08997 * 113.61331 * 270.80466 * 16 15 13 18 18 C 1.50700 * 113.61395 * 139.97833 * 16 15 13 19 19 C 1.38231 * 120.00239 * 299.73308 * 18 16 15 20 20 C 1.38234 * 119.99945 * 179.78612 * 19 18 16 21 21 C 1.38231 * 119.99922 * 0.46269 * 20 19 18 22 22 C 1.50699 * 120.00061 * 179.79107 * 21 20 19 23 23 F 1.39902 * 109.47162 * 269.97369 * 22 21 20 24 24 F 1.39905 * 109.47333 * 29.97538 * 22 21 20 25 25 F 1.39901 * 109.47541 * 149.97599 * 22 21 20 26 26 C 1.38237 * 120.00305 * 359.76504 * 21 20 19 27 27 C 1.38237 * 119.99579 * 120.00134 * 18 16 15 28 28 C 1.53774 * 113.61672 * 252.49837 * 13 12 10 29 29 C 1.39846 * 119.66001 * 0.24663 * 7 6 5 30 30 C 1.37886 * 119.82431 * 359.49858 * 29 7 6 31 31 H 0.96698 * 113.99982 * 300.00135 * 1 2 3 32 32 H 1.08998 * 109.46953 * 239.99938 * 2 1 3 33 33 H 1.48506 * 110.00125 * 300.00155 * 3 2 1 34 34 H 1.48498 * 110.00282 * 61.31526 * 3 2 1 35 35 H 1.08005 * 119.91507 * 0.02562 * 5 4 2 36 36 H 1.07997 * 120.08898 * 180.02562 * 6 5 4 37 37 H 1.08002 * 120.00168 * 0.02562 * 8 7 6 38 38 H 1.08001 * 120.00325 * 0.27519 * 9 8 7 39 39 H 0.97000 * 119.99732 * 0.02562 * 12 10 9 40 40 H 1.08993 * 113.61637 * 203.66594 * 15 13 12 41 41 H 1.09003 * 113.61239 * 334.56896 * 15 13 12 42 42 H 1.07999 * 119.99964 * 359.97438 * 19 18 16 43 43 H 1.08001 * 120.00041 * 180.24859 * 20 19 18 44 44 H 1.07995 * 120.00332 * 180.02562 * 26 21 20 45 45 H 1.08001 * 120.00165 * 359.97438 * 27 18 16 46 46 H 1.09000 * 113.61309 * 25.43688 * 28 13 12 47 47 H 1.09000 * 113.62121 * 156.34261 * 28 13 12 48 48 H 1.08004 * 120.08113 * 179.72433 * 29 7 6 49 49 H 1.08000 * 119.91254 * 180.22786 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6823 -2.0619 1.3950 6 6 2.1380 -2.7189 2.5184 7 6 2.8540 -2.0161 3.4925 8 6 3.3436 -2.7098 4.6951 9 6 4.0383 -2.0302 5.6294 10 6 4.5306 -2.7215 6.8227 11 8 4.3129 -3.9096 6.9708 12 7 5.2255 -2.0422 7.7565 13 6 5.7174 -2.7338 8.9506 14 1 5.8361 -3.8068 8.7996 15 6 6.9445 -2.0623 9.5897 16 6 5.9563 -1.2236 10.4174 17 1 5.6567 -0.2956 9.9305 18 6 6.3860 -1.0220 11.8477 19 6 6.5680 -2.1141 12.6753 20 6 6.9664 -1.9294 13.9860 21 6 7.1736 -0.6519 14.4718 22 6 7.6034 -0.4502 15.9020 23 9 6.4722 -0.3232 16.7154 24 9 8.3584 -1.5507 16.3218 25 9 8.3786 0.7105 15.9969 26 6 6.9871 0.4405 13.6456 27 6 6.5928 0.2555 12.3336 28 6 4.9495 -2.3714 10.2326 29 6 3.0975 -0.6497 3.3212 30 6 2.6397 -0.0081 2.1899 31 1 -0.3933 0.4417 0.7650 32 1 1.7923 -0.5138 -0.8900 33 1 1.5616 2.4679 -1.2085 34 1 1.5880 2.4586 1.2242 35 1 1.1295 -2.6033 0.6415 36 1 1.9433 -3.7735 2.6452 37 1 3.1505 -3.7643 4.8265 38 1 4.2319 -0.9758 5.4978 39 1 5.3993 -1.0952 7.6382 40 1 7.5506 -2.7410 10.1897 41 1 7.5354 -1.4739 8.8877 42 1 6.4018 -3.1120 12.2969 43 1 7.1125 -2.7829 14.6314 44 1 7.1494 1.4385 14.0250 45 1 6.4468 1.1090 11.6881 46 1 3.9298 -2.0325 10.0497 47 1 5.0102 -3.1345 11.0085 48 1 3.6459 -0.0994 4.0715 49 1 2.8302 1.0463 2.0544 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:10:21 Heat of formation + Delta-G solvation = -120.554657 kcal Electronic energy + Delta-G solvation = -34952.010368 eV Core-core repulsion = 29589.560047 eV Total energy + Delta-G solvation = -5362.450321 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.139 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -51.09000 -48.61023 -48.55069 -41.77688 -40.83937 -40.40473 -39.04353 -37.93939 -35.14336 -34.76196 -32.82794 -32.31484 -32.20936 -31.29380 -28.12425 -27.17374 -26.92421 -25.31118 -24.40713 -24.15211 -23.77982 -22.52769 -22.13903 -20.63066 -20.25636 -19.56117 -19.41003 -19.27676 -19.00520 -18.29006 -17.44267 -17.31221 -16.82463 -16.58973 -16.49278 -16.26849 -16.05505 -15.87484 -15.83155 -15.43464 -15.38171 -15.25015 -15.16064 -15.01377 -14.83937 -14.71021 -14.70199 -14.66454 -14.54188 -14.46992 -14.24101 -14.09421 -13.93358 -13.66642 -13.37095 -13.34497 -13.10019 -12.80609 -12.54874 -12.35103 -12.15848 -12.08993 -11.94660 -11.67441 -11.43354 -11.39806 -10.99971 -10.68497 -10.22128 -10.16874 -10.09920 -10.04597 -9.35655 -5.04825 -0.63605 -0.23126 0.13631 0.27405 0.83077 1.18995 1.50051 1.69308 1.88425 2.03426 2.20334 2.29543 2.70820 2.74321 3.03895 3.24081 3.27298 3.41895 3.43400 3.46464 3.51863 3.55695 3.65474 3.69222 3.72693 3.77191 3.77855 3.96732 4.04369 4.09261 4.13379 4.21637 4.25155 4.32850 4.45300 4.46898 4.51156 4.55575 4.67097 4.69449 4.73081 4.80312 4.84526 4.84865 4.92454 4.98886 5.03829 5.05690 5.06412 5.26714 5.33970 5.37178 5.48876 5.50833 5.61717 5.77669 6.30625 6.41389 7.17332 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.078 4.078 3 Si 0.687 3.313 4 C -0.105 4.105 5 C -0.094 4.094 6 C -0.092 4.092 7 C -0.073 4.073 8 C -0.013 4.013 9 C -0.216 4.216 10 C 0.551 3.449 11 O -0.540 6.540 12 N -0.710 5.710 13 C 0.120 3.880 14 H 0.108 0.892 15 C -0.135 4.135 16 C -0.080 4.080 17 H 0.102 0.898 18 C -0.038 4.038 19 C -0.119 4.119 20 C -0.066 4.066 21 C -0.187 4.187 22 C 0.508 3.492 23 F -0.176 7.176 24 F -0.177 7.177 25 F -0.177 7.177 26 C -0.067 4.067 27 C -0.117 4.117 28 C -0.144 4.144 29 C -0.095 4.095 30 C -0.121 4.121 31 H 0.376 0.624 32 H 0.120 0.880 33 H -0.256 1.256 34 H -0.260 1.260 35 H 0.131 0.869 36 H 0.132 0.868 37 H 0.138 0.862 38 H 0.131 0.869 39 H 0.402 0.598 40 H 0.100 0.900 41 H 0.080 0.920 42 H 0.136 0.864 43 H 0.137 0.863 44 H 0.136 0.864 45 H 0.134 0.866 46 H 0.077 0.923 47 H 0.097 0.903 48 H 0.131 0.869 49 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.992 2.853 -2.990 4.588 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.105 4.105 5 C -0.112 4.112 6 C -0.110 4.110 7 C -0.074 4.074 8 C -0.032 4.032 9 C -0.237 4.237 10 C 0.341 3.659 11 O -0.418 6.418 12 N -0.361 5.361 13 C 0.014 3.986 14 H 0.126 0.874 15 C -0.172 4.172 16 C -0.098 4.098 17 H 0.120 0.880 18 C -0.038 4.038 19 C -0.136 4.136 20 C -0.084 4.084 21 C -0.189 4.189 22 C 0.454 3.546 23 F -0.158 7.158 24 F -0.158 7.158 25 F -0.158 7.158 26 C -0.085 4.085 27 C -0.135 4.135 28 C -0.182 4.182 29 C -0.113 4.113 30 C -0.138 4.138 31 H 0.224 0.776 32 H 0.138 0.862 33 H -0.181 1.181 34 H -0.185 1.185 35 H 0.148 0.852 36 H 0.150 0.850 37 H 0.156 0.844 38 H 0.149 0.851 39 H 0.237 0.763 40 H 0.118 0.882 41 H 0.098 0.902 42 H 0.154 0.846 43 H 0.155 0.845 44 H 0.154 0.846 45 H 0.152 0.848 46 H 0.096 0.904 47 H 0.115 0.885 48 H 0.149 0.851 49 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.735 2.534 -3.391 4.575 hybrid contribution -0.870 0.470 0.935 1.360 sum 0.865 3.004 -2.456 3.976 Atomic orbital electron populations 1.86620 1.17538 1.79961 1.49326 1.25082 0.84095 1.11129 0.98474 0.94965 0.91602 0.74393 0.80243 1.20464 0.98604 0.94919 0.96538 1.21010 0.98779 0.93721 0.97715 1.21470 0.96169 1.00216 0.93101 1.19071 0.99804 0.93635 0.94851 1.22424 0.90627 1.00027 0.90162 1.22865 1.04347 1.00890 0.95588 1.18340 0.77751 0.86772 0.83049 1.90843 1.57243 1.15329 1.78426 1.45540 1.56465 1.13095 1.20992 1.21831 0.94209 0.98442 0.84079 0.87444 1.23433 0.96119 0.99039 0.98658 1.21717 0.97563 0.99052 0.91481 0.87970 1.19959 0.95443 0.93111 0.95297 1.21032 1.00236 0.99444 0.92927 1.20969 0.95569 0.95635 0.96247 1.19992 1.09954 0.96519 0.92388 1.18322 0.75048 0.73926 0.87352 1.93242 1.51376 1.95627 1.75519 1.93203 1.76936 1.54016 1.91656 1.93201 1.75891 1.49931 1.96813 1.20976 0.95671 0.98242 0.93606 1.21071 1.00231 0.97139 0.95069 1.23584 0.98966 0.97778 0.97918 1.21351 0.98941 0.93597 0.97419 1.21001 0.98820 0.99831 0.94160 0.77599 0.86221 1.18125 1.18520 0.85155 0.85018 0.84423 0.85144 0.76313 0.88158 0.90175 0.84582 0.84533 0.84585 0.84780 0.90438 0.88470 0.85084 0.85211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.28 12.83 -35.23 -0.45 -0.73 16 2 C -0.08 0.09 2.80 36.01 0.10 0.19 16 3 Si 0.69 -1.27 29.87 -169.99 -5.08 -6.34 16 4 C -0.10 0.10 5.36 -104.50 -0.56 -0.46 16 5 C -0.09 0.05 9.66 -39.65 -0.38 -0.33 16 6 C -0.09 0.06 9.80 -39.11 -0.38 -0.32 16 7 C -0.07 0.05 5.87 -105.06 -0.62 -0.56 16 8 C -0.01 0.01 9.46 -37.16 -0.35 -0.35 16 9 C -0.22 0.28 9.41 -37.50 -0.35 -0.07 16 10 C 0.55 0.43 7.74 -12.96 -0.10 0.33 16 11 O -0.54 -2.68 15.83 5.20 0.08 -2.60 16 12 N -0.71 1.49 5.26 -54.41 -0.29 1.21 16 13 C 0.12 -0.23 4.32 -67.12 -0.29 -0.53 16 14 H 0.11 -0.01 7.46 -51.93 -0.39 -0.39 16 15 C -0.13 0.48 7.29 -25.91 -0.19 0.29 16 16 C -0.08 0.28 3.86 -90.95 -0.35 -0.07 16 17 H 0.10 -0.46 8.09 -51.93 -0.42 -0.88 16 18 C -0.04 0.08 5.29 -104.62 -0.55 -0.48 16 19 C -0.12 0.20 8.63 -39.59 -0.34 -0.14 16 20 C -0.07 0.04 9.40 -39.59 -0.37 -0.33 16 21 C -0.19 -0.08 5.45 -104.63 -0.57 -0.65 16 22 C 0.51 0.80 3.36 36.00 0.12 0.92 16 23 F -0.18 -0.45 17.30 2.25 0.04 -0.41 16 24 F -0.18 -0.38 16.46 2.25 0.04 -0.34 16 25 F -0.18 -0.37 16.46 2.25 0.04 -0.33 16 26 C -0.07 0.04 9.40 -39.58 -0.37 -0.33 16 27 C -0.12 0.21 9.71 -39.58 -0.38 -0.17 16 28 C -0.14 0.36 7.25 -25.92 -0.19 0.17 16 29 C -0.10 0.16 9.41 -39.11 -0.37 -0.21 16 30 C -0.12 0.20 8.65 -39.65 -0.34 -0.14 16 31 H 0.38 -0.85 8.70 45.56 0.40 -0.45 16 32 H 0.12 -0.21 7.96 -51.93 -0.41 -0.63 16 33 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 34 H -0.26 0.02 7.00 56.52 0.40 0.42 16 35 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 36 H 0.13 -0.27 8.06 -52.49 -0.42 -0.69 16 37 H 0.14 0.03 7.52 -52.49 -0.39 -0.36 16 38 H 0.13 -0.54 6.07 -52.49 -0.32 -0.86 16 39 H 0.40 -1.96 8.68 -40.82 -0.35 -2.31 16 40 H 0.10 -0.36 7.73 -51.93 -0.40 -0.76 16 41 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 42 H 0.14 -0.46 6.64 -52.49 -0.35 -0.81 16 43 H 0.14 -0.22 7.60 -52.49 -0.40 -0.62 16 44 H 0.14 -0.24 7.60 -52.49 -0.40 -0.64 16 45 H 0.13 -0.51 8.05 -52.49 -0.42 -0.93 16 46 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 47 H 0.10 -0.27 6.30 -51.93 -0.33 -0.60 16 48 H 0.13 -0.52 6.17 -52.48 -0.32 -0.84 16 49 H 0.13 -0.42 4.81 -52.49 -0.25 -0.67 16 LS Contribution 422.04 15.07 6.36 6.36 Total: 0.00 -8.57 422.04 -11.77 -20.34 By element: Atomic # 1 Polarization: -8.26 SS G_CDS: -5.66 Total: -13.92 kcal Atomic # 6 Polarization: 3.61 SS G_CDS: -6.85 Total: -3.24 kcal Atomic # 7 Polarization: 1.49 SS G_CDS: -0.29 Total: 1.21 kcal Atomic # 8 Polarization: -2.96 SS G_CDS: -0.37 Total: -3.33 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 0.11 Total: -1.08 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.08 Total: -6.34 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -8.57 -11.77 -20.34 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.215 kcal (2) G-P(sol) polarization free energy of solvation -8.571 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.340 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.555 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds