Wall clock time and date at job start Mon Mar 8 2021 05:10:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47553 * 2 1 4 4 C 1.50697 * 109.47370 * 120.00503 * 2 1 3 5 5 C 1.38189 * 119.84221 * 14.99281 * 4 2 1 6 6 C 1.38307 * 120.14573 * 180.02562 * 5 4 2 7 7 F 1.35106 * 120.08509 * 179.97438 * 6 5 4 8 8 C 1.39812 * 119.83606 * 359.97438 * 6 5 4 9 9 C 1.47697 * 120.15749 * 179.97438 * 8 6 5 10 10 O 1.21564 * 120.00092 * 359.97438 * 9 8 6 11 11 N 1.34780 * 119.99661 * 179.97438 * 9 8 6 12 12 C 1.46497 * 119.99653 * 179.97438 * 11 9 8 13 13 H 1.09002 * 112.84935 * 334.66222 * 12 11 9 14 14 C 1.53786 * 113.61643 * 105.85894 * 12 11 9 15 15 C 1.53962 * 87.01719 * 89.22773 * 14 12 11 16 16 H 1.09002 * 113.61454 * 270.79954 * 15 14 12 17 17 C 1.50699 * 113.66451 * 139.93336 * 15 14 12 18 18 C 1.38234 * 119.99881 * 322.16728 * 17 15 14 19 19 C 1.38240 * 119.99717 * 179.81012 * 18 17 15 20 20 C 1.38239 * 119.99809 * 0.39445 * 19 18 17 21 21 C 1.50701 * 119.99732 * 179.83247 * 20 19 18 22 22 F 1.39894 * 109.47350 * 270.02424 * 21 20 19 23 23 F 1.39897 * 109.46966 * 30.02883 * 21 20 19 24 24 F 1.39905 * 109.46869 * 150.02425 * 21 20 19 25 25 C 1.38236 * 120.00092 * 359.85912 * 20 19 18 26 26 C 1.38230 * 119.99951 * 359.95596 * 25 20 19 27 27 C 1.53781 * 113.61305 * 203.46742 * 12 11 9 28 28 C 1.39655 * 119.68281 * 0.24447 * 8 6 5 29 29 C 1.38069 * 119.85584 * 359.51647 * 28 8 6 30 30 F 1.35096 * 119.92013 * 180.20558 * 29 28 8 31 31 H 0.96695 * 113.99703 * 299.99655 * 1 2 3 32 32 H 1.09003 * 109.47079 * 240.00262 * 2 1 3 33 33 H 1.48495 * 110.00454 * 178.68423 * 3 2 1 34 34 H 1.48507 * 109.99694 * 300.00378 * 3 2 1 35 35 H 1.08002 * 119.92710 * 359.97438 * 5 4 2 36 36 H 0.96995 * 120.00200 * 359.97438 * 11 9 8 37 37 H 1.08993 * 113.61491 * 203.74894 * 14 12 11 38 38 H 1.09000 * 113.61138 * 334.65232 * 14 12 11 39 39 H 1.07997 * 120.00077 * 0.02562 * 18 17 15 40 40 H 1.08000 * 119.99886 * 180.23318 * 19 18 17 41 41 H 1.08004 * 119.99811 * 179.97438 * 25 20 19 42 42 H 1.07998 * 119.99974 * 180.02562 * 26 25 20 43 43 H 1.09001 * 113.61695 * 25.34675 * 27 12 11 44 44 H 1.08997 * 113.61223 * 156.25258 * 27 12 11 45 45 H 1.08002 * 120.07278 * 179.75314 * 28 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.0690 -1.4963 1.9710 6 6 1.5233 -2.1507 3.1016 7 9 0.6790 -2.9182 3.8250 8 6 2.8584 -2.0161 3.4939 9 6 3.3510 -2.7114 4.7004 10 8 2.5948 -3.4023 5.3551 11 7 4.6388 -2.5798 5.0754 12 6 5.1272 -3.2689 6.2723 13 1 4.3368 -3.4755 6.9939 14 6 6.0131 -4.4874 5.9633 15 6 7.2095 -3.5184 5.9706 16 1 7.4174 -3.0741 4.9972 17 6 8.4407 -4.0825 6.6315 18 6 8.3191 -4.8759 7.7569 19 6 9.4483 -5.3966 8.3608 20 6 10.6997 -5.1170 7.8441 21 6 11.9309 -5.6815 8.5047 22 9 12.3899 -4.7871 9.4774 23 9 11.6178 -6.9050 9.1066 24 9 12.9281 -5.8767 7.5430 25 6 10.8216 -4.3193 6.7217 26 6 9.6921 -3.8018 6.1156 27 6 6.3734 -2.6162 6.8936 28 6 3.7227 -1.2166 2.7429 29 6 3.2568 -0.5730 1.6137 30 9 4.0928 0.1974 0.8839 31 1 -0.3932 0.4416 0.7650 32 1 1.7923 -0.5138 -0.8900 33 1 3.5347 1.7702 0.0320 34 1 1.5615 2.4678 -1.2085 35 1 0.0378 -1.5989 1.6668 36 1 5.2423 -2.0288 4.5528 37 1 6.0413 -5.2220 6.7680 38 1 5.8173 -4.9335 4.9883 39 1 7.3417 -5.0919 8.1623 40 1 9.3531 -6.0195 9.2379 41 1 11.7993 -4.1006 6.3182 42 1 9.7873 -3.1789 5.2385 43 1 6.4681 -1.5539 6.6685 44 1 6.5003 -2.8384 7.9531 45 1 4.7543 -1.1050 3.0425 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:10:25 Heat of formation + Delta-G solvation = -203.645566 kcal Electronic energy + Delta-G solvation = -38011.511698 eV Core-core repulsion = 31990.314093 eV Total energy + Delta-G solvation = -6021.197605 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.104 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -51.23418 -50.42185 -50.07430 -48.75968 -48.71007 -41.80494 -40.88208 -39.97655 -38.90720 -37.64165 -34.97964 -33.28199 -32.37542 -32.04045 -31.40466 -28.32165 -27.57608 -26.71010 -25.22908 -24.20406 -24.15974 -23.69976 -22.44842 -21.99974 -20.32782 -19.68733 -19.57366 -19.50337 -19.37359 -19.02381 -18.49671 -17.85635 -17.63818 -17.37976 -16.97898 -16.70850 -16.67568 -16.35200 -16.03471 -15.94679 -15.83491 -15.77478 -15.72069 -15.55132 -15.49159 -15.22689 -15.16590 -14.95550 -14.87426 -14.77975 -14.52148 -14.44841 -14.30580 -14.17925 -14.07081 -13.69685 -13.47810 -13.31346 -13.19127 -12.95746 -12.78999 -12.49093 -12.37486 -11.92592 -11.79569 -11.56352 -11.24939 -11.15473 -10.98848 -10.28349 -10.15380 -10.05482 -9.93322 -9.69986 -4.98974 -0.76472 -0.25953 -0.13068 0.27651 1.15302 1.48472 1.61996 1.66157 1.84036 1.99578 2.30128 2.41375 2.68876 2.81913 2.85956 2.96569 3.15019 3.21238 3.35290 3.42227 3.52203 3.54918 3.62979 3.69375 3.82999 3.83813 3.88737 3.95305 4.17800 4.22940 4.31258 4.34319 4.38986 4.41830 4.58915 4.67939 4.68136 4.76056 4.78558 4.80037 4.85031 4.86347 5.00333 5.03302 5.11793 5.19251 5.19617 5.41593 5.44420 5.60357 5.78078 6.32912 6.64159 7.01786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.073 4.073 3 Si 0.763 3.237 4 C -0.084 4.084 5 C -0.117 4.117 6 C 0.139 3.861 7 F -0.128 7.128 8 C -0.158 4.158 9 C 0.561 3.439 10 O -0.562 6.562 11 N -0.690 5.690 12 C 0.114 3.886 13 H 0.089 0.911 14 C -0.144 4.144 15 C -0.071 4.071 16 H 0.121 0.879 17 C -0.038 4.038 18 C -0.121 4.121 19 C -0.078 4.078 20 C -0.203 4.203 21 C 0.505 3.495 22 F -0.184 7.184 23 F -0.183 7.183 24 F -0.182 7.182 25 C -0.078 4.078 26 C -0.117 4.117 27 C -0.122 4.122 28 C -0.067 4.067 29 C 0.072 3.928 30 F -0.121 7.121 31 H 0.400 0.600 32 H 0.128 0.872 33 H -0.251 1.251 34 H -0.305 1.305 35 H 0.173 0.827 36 H 0.417 0.583 37 H 0.100 0.900 38 H 0.069 0.931 39 H 0.151 0.849 40 H 0.140 0.860 41 H 0.142 0.858 42 H 0.157 0.843 43 H 0.095 0.905 44 H 0.104 0.896 45 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.141 5.929 -1.464 6.108 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.182 4.182 3 Si 0.667 3.333 4 C -0.085 4.085 5 C -0.136 4.136 6 C 0.119 3.881 7 F -0.106 7.106 8 C -0.162 4.162 9 C 0.348 3.652 10 O -0.441 6.441 11 N -0.342 5.342 12 C 0.008 3.992 13 H 0.107 0.893 14 C -0.183 4.183 15 C -0.089 4.089 16 H 0.139 0.861 17 C -0.038 4.038 18 C -0.138 4.138 19 C -0.096 4.096 20 C -0.204 4.204 21 C 0.451 3.549 22 F -0.165 7.165 23 F -0.164 7.164 24 F -0.164 7.164 25 C -0.096 4.096 26 C -0.134 4.134 27 C -0.159 4.159 28 C -0.086 4.086 29 C 0.052 3.948 30 F -0.100 7.100 31 H 0.251 0.749 32 H 0.145 0.855 33 H -0.176 1.176 34 H -0.233 1.233 35 H 0.191 0.809 36 H 0.256 0.744 37 H 0.118 0.882 38 H 0.088 0.912 39 H 0.169 0.831 40 H 0.158 0.842 41 H 0.160 0.840 42 H 0.175 0.825 43 H 0.113 0.887 44 H 0.123 0.877 45 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges 0.227 5.692 -1.910 6.008 hybrid contribution 0.644 -0.946 -0.205 1.163 sum 0.871 4.746 -2.115 5.268 Atomic orbital electron populations 1.86502 1.16320 1.81835 1.50957 1.25189 0.86035 1.10702 0.96243 0.94286 0.79105 0.73815 0.86131 1.20468 0.92174 0.97685 0.98208 1.20877 1.03050 0.96768 0.92865 1.17966 0.87006 0.91994 0.91180 1.91598 1.69911 1.72561 1.76527 1.19785 0.93490 1.04096 0.98846 1.18068 0.82699 0.80463 0.83930 1.90873 1.56853 1.40966 1.55438 1.45408 1.09695 1.50541 1.28574 1.21919 0.96350 0.93869 0.87036 0.89299 1.23618 0.94432 0.96829 1.03382 1.21773 0.89936 0.97126 1.00025 0.86062 1.20138 0.95042 0.94558 0.94072 1.21251 0.98959 0.97668 0.95961 1.21123 0.90939 0.97918 0.99623 1.20030 0.92292 1.06771 1.01304 1.18548 0.84221 0.75617 0.76472 1.93216 1.90347 1.68183 1.64796 1.93182 1.92853 1.45880 1.84530 1.93183 1.64411 1.95131 1.63662 1.21162 1.01081 0.94295 0.93065 1.21350 0.90802 1.00275 1.01022 1.23383 0.91738 1.00495 1.00332 1.21292 1.01533 0.93678 0.92146 1.17301 0.87930 0.96513 0.93036 1.91603 1.70933 1.71682 1.75750 0.74897 0.85533 1.17644 1.23304 0.80926 0.74444 0.88182 0.91240 0.83125 0.84213 0.84036 0.82490 0.88654 0.87716 0.79982 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.71 11.63 -148.98 -1.73 0.98 16 2 C -0.07 0.37 2.96 71.23 0.21 0.58 16 3 Si 0.76 -3.89 30.81 68.60 2.11 -1.77 16 4 C -0.08 0.41 5.14 -19.78 -0.10 0.31 16 5 C -0.12 0.41 9.20 22.27 0.20 0.61 16 6 C 0.14 0.20 7.28 22.67 0.17 0.36 16 7 F -0.13 -1.04 15.55 44.97 0.70 -0.34 16 8 C -0.16 0.21 5.88 -20.06 -0.12 0.09 16 9 C 0.56 1.09 7.77 86.74 0.67 1.76 16 10 O -0.56 -6.60 14.96 -3.92 -0.06 -6.65 16 11 N -0.69 4.14 5.22 -443.04 -2.31 1.82 16 12 C 0.11 -0.64 4.29 45.52 0.20 -0.44 16 13 H 0.09 -0.06 7.50 -2.39 -0.02 -0.08 16 14 C -0.14 0.95 7.27 31.18 0.23 1.18 16 15 C -0.07 0.70 3.87 -10.95 -0.04 0.66 16 16 H 0.12 -1.63 8.09 -2.39 -0.02 -1.65 16 17 C -0.04 0.24 5.29 -19.87 -0.11 0.13 16 18 C -0.12 0.57 8.60 22.27 0.19 0.76 16 19 C -0.08 0.11 9.40 22.27 0.21 0.32 16 20 C -0.20 -0.18 5.45 -19.86 -0.11 -0.29 16 21 C 0.51 1.96 3.36 71.24 0.24 2.20 16 22 F -0.18 -1.05 17.30 44.97 0.78 -0.27 16 23 F -0.18 -0.97 16.46 44.97 0.74 -0.23 16 24 F -0.18 -0.91 16.46 44.97 0.74 -0.17 16 25 C -0.08 0.15 9.40 22.27 0.21 0.36 16 26 C -0.12 0.66 9.71 22.27 0.22 0.88 16 27 C -0.12 1.24 7.29 31.12 0.23 1.47 16 28 C -0.07 0.49 9.51 22.57 0.21 0.71 16 29 C 0.07 -0.38 6.65 22.33 0.15 -0.23 16 30 F -0.12 0.39 12.80 44.97 0.58 0.96 16 31 H 0.40 -5.31 8.42 -74.06 -0.62 -5.93 16 32 H 0.13 -0.55 7.96 -2.39 -0.02 -0.57 16 33 H -0.25 0.27 5.26 99.48 0.52 0.79 16 34 H -0.30 -0.96 7.11 99.48 0.71 -0.25 16 35 H 0.17 -1.02 7.06 -2.91 -0.02 -1.04 16 36 H 0.42 -5.42 6.74 -92.71 -0.62 -6.04 16 37 H 0.10 -0.68 6.34 -2.39 -0.02 -0.69 16 38 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 39 H 0.15 -1.24 6.68 -2.91 -0.02 -1.26 16 40 H 0.14 -0.41 7.60 -2.91 -0.02 -0.43 16 41 H 0.14 -0.54 7.60 -2.91 -0.02 -0.57 16 42 H 0.16 -1.68 8.05 -2.91 -0.02 -1.70 16 43 H 0.09 -1.18 8.14 -2.39 -0.02 -1.20 16 44 H 0.10 -1.05 7.71 -2.39 -0.02 -1.07 16 45 H 0.18 -2.67 6.41 -2.91 -0.02 -2.69 16 Total: 0.00 -23.06 394.35 4.13 -18.93 By element: Atomic # 1 Polarization: -24.43 SS G_CDS: -0.27 Total: -24.70 kcal Atomic # 6 Polarization: 8.57 SS G_CDS: 2.86 Total: 11.43 kcal Atomic # 7 Polarization: 4.14 SS G_CDS: -2.31 Total: 1.82 kcal Atomic # 8 Polarization: -3.88 SS G_CDS: -1.79 Total: -5.67 kcal Atomic # 9 Polarization: -3.58 SS G_CDS: 3.53 Total: -0.04 kcal Atomic # 14 Polarization: -3.89 SS G_CDS: 2.11 Total: -1.77 kcal Total: -23.06 4.13 -18.93 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -184.713 kcal (2) G-P(sol) polarization free energy of solvation -23.063 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -207.775 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.130 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.933 kcal (6) G-S(sol) free energy of system = (1) + (5) -203.646 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds