Wall clock time and date at job start Mon Mar 8 2021 05:12:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86297 * 109.47010 * 2 1 4 4 C 1.50699 * 109.46866 * 119.99774 * 2 1 3 5 5 C 1.38061 * 119.80487 * 65.00348 * 4 2 1 6 6 C 1.38711 * 120.08262 * 179.97438 * 5 4 2 7 7 O 1.35655 * 120.14587 * 180.02562 * 6 5 4 8 8 C 1.40132 * 119.70003 * 359.97438 * 6 5 4 9 9 C 1.47537 * 120.18997 * 179.97438 * 8 6 5 10 10 O 1.21589 * 119.99964 * 359.97438 * 9 8 6 11 11 N 1.34784 * 119.99987 * 180.02562 * 9 8 6 12 12 C 1.46496 * 119.99758 * 179.97438 * 11 9 8 13 13 H 1.09001 * 112.85032 * 336.19438 * 12 11 9 14 14 C 1.53782 * 113.68971 * 107.45966 * 12 11 9 15 15 C 1.53962 * 87.11063 * 89.19569 * 14 12 11 16 16 H 1.08993 * 113.61598 * 270.84305 * 15 14 12 17 17 C 1.50700 * 113.66521 * 139.88647 * 15 14 12 18 18 C 1.38239 * 120.00420 * 322.28168 * 17 15 14 19 19 C 1.38228 * 120.00104 * 179.76396 * 18 17 15 20 20 C 1.38243 * 120.00146 * 0.50833 * 19 18 17 21 21 C 1.50694 * 120.00373 * 179.72357 * 20 19 18 22 22 F 1.39901 * 109.47113 * 270.02187 * 21 20 19 23 23 F 1.39907 * 109.46786 * 30.02038 * 21 20 19 24 24 F 1.39893 * 109.47306 * 150.02048 * 21 20 19 25 25 C 1.38237 * 119.99588 * 359.74470 * 20 19 18 26 26 C 1.38235 * 119.99543 * 142.55106 * 17 15 14 27 27 C 1.53781 * 113.61266 * 204.99541 * 12 11 9 28 28 C 1.39704 * 119.62100 * 0.25197 * 8 6 5 29 29 C 1.37797 * 119.90566 * 359.51102 * 28 8 6 30 30 H 0.96702 * 114.00455 * 60.00155 * 1 2 3 31 31 H 1.09003 * 109.47138 * 239.99622 * 2 1 3 32 32 H 1.48498 * 110.00305 * 60.00016 * 3 2 1 33 33 H 1.48501 * 109.99872 * 181.31945 * 3 2 1 34 34 H 1.07991 * 119.95678 * 359.97438 * 5 4 2 35 35 H 0.96691 * 114.00167 * 269.97888 * 7 6 5 36 36 H 0.97001 * 119.99554 * 359.97438 * 11 9 8 37 37 H 1.08997 * 113.61668 * 203.67120 * 14 12 11 38 38 H 1.08994 * 113.61387 * 334.57855 * 14 12 11 39 39 H 1.07997 * 119.99709 * 359.97438 * 18 17 15 40 40 H 1.07994 * 120.00065 * 180.22861 * 19 18 17 41 41 H 1.08001 * 119.99747 * 179.97438 * 25 20 19 42 42 H 1.07991 * 120.00202 * 0.02562 * 26 17 15 43 43 H 1.09002 * 113.61445 * 25.35018 * 27 12 11 44 44 H 1.09002 * 113.61408 * 156.16749 * 27 12 11 45 45 H 1.08001 * 120.04938 * 179.72448 * 28 8 6 46 46 H 1.08000 * 119.84898 * 180.22912 * 29 28 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.6827 -2.0585 1.3941 6 6 2.1428 -2.7182 2.5242 7 8 1.8997 -4.0430 2.6860 8 6 2.8607 -2.0103 3.4974 9 6 3.3546 -2.7011 4.7039 10 8 3.1387 -3.8879 4.8562 11 7 4.0442 -2.0163 5.6378 12 6 4.5341 -2.7021 6.8360 13 1 3.9638 -3.6003 7.0726 14 6 6.0565 -2.9190 6.8448 15 6 6.1705 -1.5421 7.5240 16 1 6.2555 -0.7139 6.8206 17 6 7.2055 -1.4911 8.6181 18 6 7.3816 -2.5777 9.4544 19 6 8.3344 -2.5327 10.4548 20 6 9.1040 -1.3972 10.6259 21 6 10.1384 -1.3457 11.7205 22 9 9.5560 -0.8437 12.8893 23 9 10.6285 -2.6341 11.9598 24 9 11.1910 -0.5118 11.3286 25 6 8.9243 -0.3086 9.7930 26 6 7.9751 -0.3556 8.7891 27 6 4.7394 -1.7677 8.0400 28 6 3.1010 -0.6454 3.3215 29 6 2.6408 -0.0069 2.1903 30 1 -0.3934 0.4417 -0.7650 31 1 1.7923 -0.5139 -0.8900 32 1 1.5614 2.4679 1.2085 33 1 3.5345 1.7703 -0.0321 34 1 1.1294 -2.6001 0.6413 35 1 1.0746 -4.2376 3.1511 36 1 4.2161 -1.0693 5.5164 37 1 6.3762 -3.7454 7.4796 38 1 6.4984 -2.9535 5.8490 39 1 6.7771 -3.4631 9.3238 40 1 8.4745 -3.3830 11.1057 41 1 9.5253 0.5787 9.9269 42 1 7.8343 0.4951 8.1389 43 1 4.1179 -0.8727 8.0091 44 1 4.6975 -2.2791 9.0017 45 1 3.6496 -0.0920 4.0693 46 1 2.8303 1.0475 2.0535 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:12:13 Heat of formation + Delta-G solvation = -168.754917 kcal Electronic energy + Delta-G solvation = -35119.134014 eV Core-core repulsion = 29719.675140 eV Total energy + Delta-G solvation = -5399.458874 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.122 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -51.25054 -48.77561 -48.72555 -41.96975 -41.22277 -40.07263 -38.91310 -38.32301 -37.22500 -34.91169 -33.26694 -32.33269 -32.04468 -31.25479 -28.18899 -27.35528 -26.74596 -25.17057 -24.13467 -23.99346 -23.50260 -22.45647 -21.81689 -20.32766 -19.62077 -19.55938 -19.46844 -19.28582 -18.83020 -18.42739 -17.75974 -17.25347 -16.75090 -16.54626 -16.38220 -16.34014 -15.97857 -15.89580 -15.58314 -15.56506 -15.47887 -15.26812 -15.18648 -15.02810 -14.94594 -14.88881 -14.57981 -14.48289 -14.34397 -14.17174 -14.10090 -14.03558 -13.54247 -13.43476 -13.27376 -12.99240 -12.81737 -12.49434 -12.41415 -12.13499 -11.95905 -11.85260 -11.82264 -11.28442 -11.00617 -10.44951 -10.25382 -10.10032 -10.07473 -9.97219 -9.88975 -4.89989 -0.53691 -0.16048 -0.00100 0.24695 1.28341 1.56980 1.59962 1.70231 1.92577 1.96174 2.37893 2.43219 2.66731 2.94709 3.03172 3.25710 3.33411 3.38447 3.46468 3.58969 3.59661 3.66378 3.74465 3.80071 3.85926 3.91635 4.01457 4.11794 4.16293 4.25142 4.28214 4.36007 4.53102 4.59262 4.63518 4.64902 4.73595 4.78907 4.81885 4.84153 4.96868 4.98729 5.01016 5.09301 5.11183 5.16134 5.16769 5.41771 5.44838 5.57644 5.74775 6.37399 6.63048 6.87022 7.07413 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.091 4.091 3 Si 0.777 3.223 4 C -0.040 4.040 5 C -0.136 4.136 6 C 0.159 3.841 7 O -0.494 6.494 8 C -0.181 4.181 9 C 0.561 3.439 10 O -0.558 6.558 11 N -0.696 5.696 12 C 0.114 3.886 13 H 0.088 0.912 14 C -0.144 4.144 15 C -0.070 4.070 16 H 0.119 0.881 17 C -0.038 4.038 18 C -0.121 4.121 19 C -0.077 4.077 20 C -0.202 4.202 21 C 0.506 3.494 22 F -0.184 7.184 23 F -0.183 7.183 24 F -0.182 7.182 25 C -0.077 4.077 26 C -0.117 4.117 27 C -0.122 4.122 28 C -0.052 4.052 29 C -0.154 4.154 30 H 0.406 0.594 31 H 0.096 0.904 32 H -0.286 1.286 33 H -0.283 1.283 34 H 0.145 0.855 35 H 0.409 0.591 36 H 0.413 0.587 37 H 0.101 0.899 38 H 0.067 0.933 39 H 0.151 0.849 40 H 0.141 0.859 41 H 0.143 0.857 42 H 0.157 0.843 43 H 0.091 0.909 44 H 0.105 0.895 45 H 0.167 0.833 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.398 6.989 -5.328 9.423 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.200 4.200 3 Si 0.681 3.319 4 C -0.041 4.041 5 C -0.155 4.155 6 C 0.113 3.887 7 O -0.307 6.307 8 C -0.185 4.185 9 C 0.349 3.651 10 O -0.437 6.437 11 N -0.349 5.349 12 C 0.008 3.992 13 H 0.106 0.894 14 C -0.182 4.182 15 C -0.088 4.088 16 H 0.137 0.863 17 C -0.038 4.038 18 C -0.139 4.139 19 C -0.095 4.095 20 C -0.204 4.204 21 C 0.452 3.548 22 F -0.165 7.165 23 F -0.164 7.164 24 F -0.163 7.163 25 C -0.095 4.095 26 C -0.135 4.135 27 C -0.160 4.160 28 C -0.071 4.071 29 C -0.171 4.171 30 H 0.257 0.743 31 H 0.114 0.886 32 H -0.213 1.213 33 H -0.210 1.210 34 H 0.163 0.837 35 H 0.270 0.730 36 H 0.252 0.748 37 H 0.119 0.881 38 H 0.085 0.915 39 H 0.168 0.832 40 H 0.159 0.841 41 H 0.161 0.839 42 H 0.174 0.826 43 H 0.110 0.890 44 H 0.123 0.877 45 H 0.184 0.816 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -2.442 6.338 -4.494 8.144 hybrid contribution 0.141 -0.452 0.796 0.926 sum -2.302 5.886 -3.698 7.322 Atomic orbital electron populations 1.86434 1.16813 1.82577 1.51500 1.25021 0.86292 1.11904 0.96771 0.93988 0.77656 0.74920 0.85297 1.19846 0.95354 0.93464 0.95432 1.21412 1.01189 0.94306 0.98592 1.18741 0.94190 0.83415 0.92385 1.84703 1.47261 1.18561 1.80173 1.20435 1.06546 0.95128 0.96373 1.18180 0.77835 0.86217 0.82864 1.90812 1.58361 1.16314 1.78232 1.45460 1.55543 1.13565 1.20320 1.21887 0.95194 0.97014 0.85060 0.89353 1.23614 0.95453 0.97560 1.01577 1.21737 0.92731 0.99108 0.95209 0.86316 1.20120 0.95240 0.93254 0.95234 1.21242 0.98214 0.99762 0.94636 1.21120 0.93948 0.96464 0.97982 1.20034 1.01242 0.99599 0.99484 1.18522 0.81001 0.73289 0.81979 1.93219 1.84168 1.87550 1.51582 1.93185 1.89037 1.39082 1.95105 1.93181 1.60033 1.72347 1.90778 1.21163 0.97556 0.97144 0.93644 1.21341 0.95018 0.99082 0.98055 1.23385 0.94856 1.00276 0.97510 1.21398 0.96461 0.91816 0.97385 1.21067 1.01118 1.00073 0.94867 0.74258 0.88642 1.21323 1.20990 0.83728 0.73030 0.74832 0.88081 0.91452 0.83174 0.84111 0.83930 0.82581 0.89043 0.87662 0.81571 0.84547 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.70 12.81 -148.98 -1.91 -0.20 16 2 C -0.09 0.32 2.78 71.24 0.20 0.52 16 3 Si 0.78 -4.72 29.83 68.60 2.05 -2.67 16 4 C -0.04 -0.07 5.39 -19.83 -0.11 -0.18 16 5 C -0.14 -0.53 9.60 22.34 0.21 -0.32 16 6 C 0.16 1.00 6.72 22.84 0.15 1.15 16 7 O -0.49 -3.95 11.58 -68.79 -0.80 -4.75 16 8 C -0.18 -0.71 5.89 -20.01 -0.12 -0.83 16 9 C 0.56 3.13 7.76 86.69 0.67 3.80 16 10 O -0.56 -7.65 14.76 16.92 0.25 -7.40 16 11 N -0.70 1.64 5.22 -443.19 -2.31 -0.67 16 12 C 0.11 -0.33 4.32 45.52 0.20 -0.13 16 13 H 0.09 0.16 7.46 -2.39 -0.02 0.14 16 14 C -0.14 0.61 7.27 31.18 0.23 0.84 16 15 C -0.07 0.54 3.87 -10.95 -0.04 0.50 16 16 H 0.12 -1.29 8.10 -2.39 -0.02 -1.31 16 17 C -0.04 0.18 5.29 -19.86 -0.11 0.08 16 18 C -0.12 0.42 8.60 22.27 0.19 0.61 16 19 C -0.08 0.04 9.40 22.27 0.21 0.25 16 20 C -0.20 -0.33 5.45 -19.87 -0.11 -0.44 16 21 C 0.51 2.23 3.36 71.23 0.24 2.47 16 22 F -0.18 -1.14 17.30 44.97 0.78 -0.36 16 23 F -0.18 -1.05 16.46 44.97 0.74 -0.31 16 24 F -0.18 -0.99 16.46 44.97 0.74 -0.25 16 25 C -0.08 0.09 9.40 22.27 0.21 0.29 16 26 C -0.12 0.51 9.71 22.27 0.22 0.73 16 27 C -0.12 0.95 7.28 31.12 0.23 1.18 16 28 C -0.05 0.08 9.54 22.52 0.21 0.29 16 29 C -0.15 -0.03 8.64 22.24 0.19 0.16 16 30 H 0.41 -5.43 8.74 -74.06 -0.65 -6.07 16 31 H 0.10 -0.66 7.96 -2.39 -0.02 -0.67 16 32 H -0.29 -0.03 7.04 99.48 0.70 0.67 16 33 H -0.28 0.31 7.11 99.48 0.71 1.01 16 34 H 0.14 0.33 8.06 -2.92 -0.02 0.31 16 35 H 0.41 0.39 9.06 -74.06 -0.67 -0.28 16 36 H 0.41 -3.59 6.74 -92.71 -0.62 -4.22 16 37 H 0.10 -0.50 6.33 -2.39 -0.02 -0.51 16 38 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 39 H 0.15 -1.04 6.68 -2.91 -0.02 -1.06 16 40 H 0.14 -0.31 7.60 -2.91 -0.02 -0.33 16 41 H 0.14 -0.45 7.60 -2.91 -0.02 -0.47 16 42 H 0.16 -1.45 8.05 -2.92 -0.02 -1.48 16 43 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 44 H 0.11 -0.84 7.71 -2.39 -0.02 -0.86 16 45 H 0.17 -1.58 6.40 -2.91 -0.02 -1.59 16 46 H 0.14 -0.30 4.83 -2.91 -0.01 -0.31 16 Total: 0.00 -25.31 396.47 1.61 -23.70 By element: Atomic # 1 Polarization: -17.25 SS G_CDS: -0.81 Total: -18.05 kcal Atomic # 6 Polarization: 8.09 SS G_CDS: 2.88 Total: 10.97 kcal Atomic # 7 Polarization: 1.64 SS G_CDS: -2.31 Total: -0.67 kcal Atomic # 8 Polarization: -9.90 SS G_CDS: -2.45 Total: -12.35 kcal Atomic # 9 Polarization: -3.17 SS G_CDS: 2.26 Total: -0.91 kcal Atomic # 14 Polarization: -4.72 SS G_CDS: 2.05 Total: -2.67 kcal Total: -25.31 1.61 -23.70 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.059 kcal (2) G-P(sol) polarization free energy of solvation -25.308 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -170.368 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.613 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -168.755 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds