Wall clock time and date at job start Mon Mar 8 2021 05:12:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46974 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00123 * 2 1 3 5 5 C 1.34177 * 125.43575 * 64.99922 * 4 2 1 6 6 C 1.47025 * 105.95014 * 179.97438 * 5 4 2 7 7 C 1.47379 * 127.18977 * 180.02562 * 6 5 4 8 8 O 1.21613 * 120.00120 * 359.97438 * 7 6 5 9 9 N 1.34781 * 120.00132 * 180.02562 * 7 6 5 10 10 C 1.46497 * 120.00019 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.85261 * 23.79625 * 10 9 7 12 12 C 1.53779 * 113.61208 * 154.99624 * 10 9 7 13 13 C 1.53784 * 87.07992 * 89.11487 * 12 10 9 14 14 H 1.08993 * 113.61272 * 270.79771 * 13 12 10 15 15 C 1.50707 * 113.61254 * 139.97870 * 13 12 10 16 16 C 1.38238 * 120.00037 * 299.72638 * 15 13 12 17 17 C 1.38237 * 119.99664 * 179.81341 * 16 15 13 18 18 C 1.38228 * 119.99809 * 0.39508 * 17 16 15 19 19 C 1.50708 * 119.99770 * 179.83883 * 18 17 16 20 20 F 1.39901 * 109.46770 * 270.01887 * 19 18 17 21 21 F 1.39899 * 109.47074 * 30.01903 * 19 18 17 22 22 F 1.39895 * 109.47456 * 150.02336 * 19 18 17 23 23 C 1.38231 * 120.00786 * 359.85774 * 18 17 16 24 24 C 1.38233 * 119.99873 * 120.00273 * 15 13 12 25 25 C 1.53779 * 113.61374 * 252.49565 * 10 9 7 26 26 C 1.36413 * 105.61642 * 0.02562 * 6 5 4 27 27 O 1.33654 * 108.39777 * 359.75377 * 26 6 5 28 28 H 0.96708 * 114.00101 * 299.99304 * 1 2 3 29 29 H 1.09002 * 109.46984 * 240.00143 * 2 1 3 30 30 H 1.48493 * 110.00101 * 300.00094 * 3 2 1 31 31 H 1.48502 * 109.99925 * 61.32089 * 3 2 1 32 32 H 1.07991 * 127.02376 * 359.97438 * 5 4 2 33 33 H 0.96997 * 119.99506 * 359.97438 * 9 7 6 34 34 H 1.09002 * 113.61107 * 203.65949 * 12 10 9 35 35 H 1.08995 * 113.61529 * 334.57002 * 12 10 9 36 36 H 1.07995 * 119.99801 * 0.02562 * 16 15 13 37 37 H 1.08001 * 119.99534 * 180.22923 * 17 16 15 38 38 H 1.07993 * 120.00655 * 179.97438 * 23 18 17 39 39 H 1.08008 * 120.00030 * 359.97438 * 24 15 13 40 40 H 1.09004 * 113.61726 * 25.43205 * 25 10 9 41 41 H 1.09000 * 113.61774 * 156.33923 * 25 10 9 42 42 H 1.08002 * 125.79905 * 180.02562 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7551 -2.0122 1.5036 6 6 2.4132 -2.2463 2.7974 7 6 2.5017 -3.5195 3.5343 8 8 1.9942 -4.5246 3.0749 9 7 3.1443 -3.5697 4.7180 10 6 3.2329 -4.8355 5.4503 11 1 3.1309 -5.7068 4.8034 12 6 4.4376 -4.9130 6.4029 13 6 3.5280 -4.2937 7.4771 14 1 3.5439 -3.2039 7.4873 15 6 3.7154 -4.8946 8.8465 16 6 3.4856 -6.2429 9.0469 17 6 3.6613 -6.7948 10.3021 18 6 4.0588 -5.9968 11.3585 19 6 4.2468 -6.5978 12.7277 20 9 3.0418 -6.5314 13.4355 21 9 4.6398 -7.9344 12.6003 22 9 5.2330 -5.8855 13.4183 23 6 4.2835 -4.6475 11.1592 24 6 4.1116 -4.0964 9.9032 25 6 2.3401 -4.8871 6.7013 26 6 2.9245 -1.0387 3.1730 27 8 2.6309 -0.1430 2.2255 28 1 -0.3934 0.4416 0.7652 29 1 1.7923 -0.5138 -0.8900 30 1 1.5614 2.4679 -1.2084 31 1 1.5878 2.4585 1.2243 32 1 1.2360 -2.7394 0.8971 33 1 3.5488 -2.7680 5.0846 34 1 4.7497 -5.9324 6.6299 35 1 5.2677 -4.2702 6.1102 36 1 3.1722 -6.8657 8.2222 37 1 3.4853 -7.8489 10.4579 38 1 4.5937 -4.0240 11.9846 39 1 4.2872 -3.0421 9.7474 40 1 1.4770 -4.2233 6.6496 41 1 2.0790 -5.8993 7.0100 42 1 3.4770 -0.8411 4.0798 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_13456056.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:12:42 Heat of formation + Delta-G solvation = -142.065568 kcal Electronic energy + Delta-G solvation = -31382.891378 eV Core-core repulsion = 26268.353601 eV Total energy + Delta-G solvation = -5114.537777 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.107 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -51.10151 -48.62199 -48.56163 -43.79435 -41.76655 -40.39817 -38.94239 -38.20071 -34.92881 -33.95977 -32.84108 -32.25561 -31.69597 -28.05849 -26.95934 -26.80225 -25.65656 -24.64362 -24.03989 -22.50934 -22.35678 -21.18880 -20.41866 -19.58990 -19.44367 -19.41690 -19.26908 -17.92571 -17.78430 -17.61278 -17.16425 -16.85077 -16.52389 -16.19874 -16.08577 -15.96640 -15.68939 -15.44150 -15.39476 -15.17608 -15.01968 -14.84137 -14.72053 -14.68893 -14.55878 -14.49840 -14.24201 -14.18548 -13.98610 -13.70886 -13.64176 -13.39439 -13.00662 -12.82827 -12.57109 -12.13014 -12.12113 -11.98162 -11.46103 -11.14636 -10.96520 -10.81313 -10.26495 -10.20051 -10.07453 -9.89104 -5.05252 -0.24956 0.11911 0.14888 0.82555 1.06630 1.41456 1.65321 1.68102 1.86261 1.91193 2.24125 2.28483 2.73057 3.02677 3.07821 3.19707 3.29728 3.40002 3.43178 3.47229 3.50797 3.62999 3.70867 3.74309 3.82759 3.93530 4.11519 4.21337 4.23168 4.31175 4.42270 4.48811 4.51529 4.53333 4.63512 4.66746 4.72877 4.78104 4.81749 4.90539 5.03431 5.04784 5.15418 5.30096 5.43303 5.59900 5.75366 6.17504 6.32342 7.11078 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.036 4.036 3 Si 0.704 3.296 4 C -0.056 4.056 5 C -0.122 4.122 6 C -0.238 4.238 7 C 0.591 3.409 8 O -0.527 6.527 9 N -0.712 5.712 10 C 0.121 3.879 11 H 0.109 0.891 12 C -0.134 4.134 13 C -0.080 4.080 14 H 0.102 0.898 15 C -0.039 4.039 16 C -0.119 4.119 17 C -0.066 4.066 18 C -0.187 4.187 19 C 0.508 3.492 20 F -0.176 7.176 21 F -0.177 7.177 22 F -0.177 7.177 23 C -0.067 4.067 24 C -0.117 4.117 25 C -0.144 4.144 26 C 0.033 3.967 27 O -0.165 6.165 28 H 0.381 0.619 29 H 0.138 0.862 30 H -0.249 1.249 31 H -0.256 1.256 32 H 0.163 0.837 33 H 0.398 0.602 34 H 0.101 0.899 35 H 0.080 0.920 36 H 0.137 0.863 37 H 0.137 0.863 38 H 0.136 0.864 39 H 0.134 0.866 40 H 0.077 0.923 41 H 0.098 0.902 42 H 0.213 0.787 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.700 4.340 -0.564 5.731 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.145 4.145 3 Si 0.603 3.397 4 C -0.104 4.104 5 C -0.142 4.142 6 C -0.242 4.242 7 C 0.379 3.621 8 O -0.403 6.403 9 N -0.363 5.363 10 C 0.016 3.984 11 H 0.127 0.873 12 C -0.172 4.172 13 C -0.098 4.098 14 H 0.120 0.880 15 C -0.039 4.039 16 C -0.136 4.136 17 C -0.084 4.084 18 C -0.188 4.188 19 C 0.453 3.547 20 F -0.158 7.158 21 F -0.158 7.158 22 F -0.158 7.158 23 C -0.085 4.085 24 C -0.135 4.135 25 C -0.183 4.183 26 C -0.038 4.038 27 O -0.061 6.061 28 H 0.229 0.771 29 H 0.156 0.844 30 H -0.173 1.173 31 H -0.180 1.180 32 H 0.180 0.820 33 H 0.233 0.767 34 H 0.120 0.880 35 H 0.099 0.901 36 H 0.154 0.846 37 H 0.155 0.845 38 H 0.154 0.846 39 H 0.152 0.848 40 H 0.096 0.904 41 H 0.116 0.884 42 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 3.267 4.416 -1.441 5.679 hybrid contribution -0.796 -0.186 1.346 1.575 sum 2.471 4.230 -0.095 4.900 Atomic orbital electron populations 1.86686 1.16622 1.80128 1.49213 1.24407 0.84048 1.12301 0.93742 0.94456 0.91258 0.72991 0.80970 1.22687 1.01596 0.93389 0.92731 1.22551 1.01011 0.95321 0.95293 1.21496 1.09306 0.94208 0.99235 1.17256 0.77690 0.87156 0.79975 1.90830 1.46064 1.35649 1.67802 1.45485 1.57738 1.11876 1.21223 1.21846 0.96303 0.87652 0.92605 0.87282 1.23438 0.96644 1.02918 0.94205 1.21718 0.97826 1.00167 0.90098 0.88007 1.19952 0.95347 0.93592 0.94971 1.21036 1.00790 0.94878 0.96926 1.20972 0.95437 1.00119 0.91874 1.19997 1.10239 0.96218 0.92377 1.18322 0.74078 0.76072 0.86187 1.93242 1.45679 1.96077 1.80761 1.93203 1.90934 1.35591 1.96073 1.93200 1.62790 1.78184 1.81655 1.20976 0.96107 0.93058 0.98349 1.21066 1.00333 1.00385 0.91724 1.23594 0.97064 1.02638 0.94968 1.24459 0.99458 0.86736 0.93157 1.83698 1.57025 1.39011 1.26401 0.77104 0.84414 1.17312 1.18015 0.81986 0.76706 0.88038 0.90135 0.84566 0.84517 0.84574 0.84782 0.90395 0.88362 0.77021 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.08 12.88 -35.23 -0.45 -0.53 16 2 C -0.04 0.05 2.97 36.01 0.11 0.15 16 3 Si 0.70 -1.38 32.09 -169.99 -5.46 -6.84 16 4 C -0.06 0.02 6.18 -35.74 -0.22 -0.20 16 5 C -0.12 -0.14 10.90 -37.45 -0.41 -0.55 16 6 C -0.24 -0.05 6.31 -103.28 -0.65 -0.70 16 7 C 0.59 0.87 7.81 -12.54 -0.10 0.77 16 8 O -0.53 -3.10 16.58 5.27 0.09 -3.02 16 9 N -0.71 1.62 5.25 -54.11 -0.28 1.33 16 10 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 11 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 12 C -0.13 0.53 7.29 -25.92 -0.19 0.35 16 13 C -0.08 0.31 3.86 -90.95 -0.35 -0.04 16 14 H 0.10 -0.52 8.09 -51.93 -0.42 -0.94 16 15 C -0.04 0.09 5.29 -104.62 -0.55 -0.46 16 16 C -0.12 0.23 8.62 -39.58 -0.34 -0.11 16 17 C -0.07 0.05 9.40 -39.59 -0.37 -0.32 16 18 C -0.19 -0.05 5.45 -104.62 -0.57 -0.62 16 19 C 0.51 0.74 3.36 36.01 0.12 0.86 16 20 F -0.18 -0.43 17.30 2.25 0.04 -0.39 16 21 F -0.18 -0.36 16.46 2.25 0.04 -0.32 16 22 F -0.18 -0.35 16.46 2.25 0.04 -0.31 16 23 C -0.07 0.06 9.40 -39.58 -0.37 -0.32 16 24 C -0.12 0.24 9.71 -39.58 -0.38 -0.14 16 25 C -0.14 0.40 7.25 -25.92 -0.19 0.21 16 26 C 0.03 -0.09 11.61 30.07 0.35 0.26 16 27 O -0.17 0.20 8.90 7.65 0.07 0.27 16 28 H 0.38 -1.03 8.70 45.56 0.40 -0.64 16 29 H 0.14 -0.36 7.96 -51.93 -0.41 -0.77 16 30 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 31 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 32 H 0.16 0.28 8.06 -52.49 -0.42 -0.14 16 33 H 0.40 -2.18 7.67 -40.82 -0.31 -2.49 16 34 H 0.10 -0.40 7.73 -51.93 -0.40 -0.80 16 35 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 36 H 0.14 -0.49 6.64 -52.49 -0.35 -0.84 16 37 H 0.14 -0.24 7.61 -52.49 -0.40 -0.64 16 38 H 0.14 -0.26 7.60 -52.49 -0.40 -0.66 16 39 H 0.13 -0.55 8.06 -52.48 -0.42 -0.98 16 40 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.10 -0.30 6.30 -51.93 -0.33 -0.62 16 42 H 0.21 -1.58 7.47 -52.49 -0.39 -1.97 16 LS Contribution 375.54 15.07 5.66 5.66 Total: 0.00 -9.42 375.54 -8.97 -18.40 By element: Atomic # 1 Polarization: -8.51 SS G_CDS: -4.29 Total: -12.81 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: -4.41 Total: -1.43 kcal Atomic # 7 Polarization: 1.62 SS G_CDS: -0.28 Total: 1.33 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.30 Total: -3.28 kcal Atomic # 9 Polarization: -1.14 SS G_CDS: 0.11 Total: -1.03 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.46 Total: -6.84 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -9.42 -8.97 -18.40 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_13456056.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.668 kcal (2) G-P(sol) polarization free energy of solvation -9.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.973 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.066 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds