Wall clock time and date at job start Mon Mar 8 2021 05:12:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86299 * 109.47277 * 2 1 4 4 C 1.50701 * 109.47408 * 239.99724 * 2 1 3 5 5 C 1.34847 * 125.89095 * 119.97342 * 4 2 1 6 6 C 1.40886 * 107.41925 * 180.02562 * 5 4 2 7 7 C 1.34848 * 107.41710 * 359.97438 * 6 5 4 8 8 C 1.50703 * 125.89269 * 180.02562 * 7 6 5 9 9 C 1.50695 * 109.47216 * 85.03025 * 8 7 6 10 10 O 1.21282 * 119.99917 * 359.97438 * 9 8 7 11 11 N 1.34772 * 120.00305 * 180.02562 * 9 8 7 12 12 C 1.46506 * 120.00033 * 179.97438 * 11 9 8 13 13 H 1.08992 * 112.90684 * 336.24748 * 12 11 9 14 14 C 1.54049 * 113.61276 * 107.61836 * 12 11 9 15 15 C 1.53781 * 87.08031 * 89.07129 * 14 12 11 16 16 H 1.08999 * 113.61181 * 270.87794 * 15 14 12 17 17 C 1.50698 * 113.61565 * 139.97986 * 15 14 12 18 18 C 1.38239 * 119.99609 * 322.22368 * 17 15 14 19 19 C 1.38239 * 119.99769 * 179.76724 * 18 17 15 20 20 C 1.38237 * 119.99618 * 0.49222 * 19 18 17 21 21 C 1.50704 * 119.99644 * 179.76552 * 20 19 18 22 22 F 1.39901 * 109.47164 * 270.02197 * 21 20 19 23 23 F 1.39898 * 109.47077 * 30.02076 * 21 20 19 24 24 F 1.39903 * 109.46915 * 150.01807 * 21 20 19 25 25 C 1.38229 * 120.00293 * 359.78817 * 20 19 18 26 26 C 1.38229 * 120.00282 * 142.50684 * 17 15 14 27 27 C 1.53781 * 87.08070 * 25.42738 * 15 14 12 28 28 N 1.36340 * 108.21872 * 0.26617 * 7 6 5 29 29 H 0.96704 * 114.00393 * 59.99819 * 1 2 3 30 30 H 1.09006 * 109.47128 * 119.99545 * 2 1 3 31 31 H 1.48500 * 110.00082 * 298.67932 * 3 2 1 32 32 H 1.48499 * 110.00023 * 60.00135 * 3 2 1 33 33 H 1.08000 * 126.29148 * 0.02562 * 5 4 2 34 34 H 1.07996 * 126.29736 * 179.97438 * 6 5 4 35 35 H 1.08997 * 109.47335 * 325.02487 * 8 7 6 36 36 H 1.09001 * 109.46913 * 205.02509 * 8 7 6 37 37 H 0.97002 * 120.00078 * 359.97438 * 11 9 8 38 38 H 1.09005 * 113.62125 * 334.52173 * 14 12 11 39 39 H 1.09003 * 113.61268 * 203.61961 * 14 12 11 40 40 H 1.08004 * 120.00241 * 0.02562 * 18 17 15 41 41 H 1.08001 * 119.99840 * 180.24955 * 19 18 17 42 42 H 1.08003 * 120.00237 * 179.97438 * 25 20 19 43 43 H 1.07997 * 119.99881 * 359.97438 * 26 17 15 44 44 H 1.09002 * 113.61445 * 89.11830 * 27 15 14 45 45 H 1.09002 * 113.61408 * 219.93560 * 27 15 14 46 46 H 0.97006 * 125.64037 * 179.73589 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7094 -0.1726 -2.1915 6 6 2.9442 -1.1745 -3.1538 7 6 2.3010 -2.2865 -2.7439 8 6 2.2760 -3.6094 -3.4655 9 6 3.4947 -4.4110 -3.0874 10 8 4.3042 -3.9531 -2.3090 11 7 3.6857 -5.6364 -3.6150 12 6 4.8708 -6.4155 -3.2478 13 1 5.6965 -5.7940 -2.9014 14 6 4.5630 -7.6080 -2.3225 15 6 4.3444 -8.4396 -3.5975 16 1 3.3189 -8.4124 -3.9661 17 6 4.8987 -9.8381 -3.5086 18 6 6.0933 -10.0675 -2.8519 19 6 6.5994 -11.3511 -2.7661 20 6 5.9160 -12.4036 -3.3459 21 6 6.4705 -13.8021 -3.2569 22 9 7.3036 -14.0442 -4.3545 23 9 7.2057 -13.9380 -2.0745 24 9 5.4168 -14.7225 -3.2592 25 6 4.7244 -12.1733 -4.0075 26 6 4.2157 -10.8906 -4.0887 27 6 5.2814 -7.4496 -4.3094 28 7 1.6729 -2.0062 -1.5667 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8901 31 1 1.5879 2.4585 -1.2242 32 1 1.5615 2.4679 1.2085 33 1 3.0839 0.8400 -2.2186 34 1 3.5313 -1.0709 -4.0543 35 1 2.2744 -3.4363 -4.5416 36 1 1.3778 -4.1594 -3.1846 37 1 3.0384 -6.0025 -4.2378 38 1 3.6597 -7.4768 -1.7266 39 1 5.4183 -7.9334 -1.7303 40 1 6.6292 -9.2446 -2.4023 41 1 7.5307 -11.5309 -2.2496 42 1 4.1907 -12.9956 -4.4608 43 1 3.2845 -10.7107 -4.6053 44 1 6.3331 -7.7316 -4.2605 45 1 4.9589 -7.1914 -5.3181 46 1 1.1332 -2.6268 -1.0523 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:12:52 Heat of formation + Delta-G solvation = -118.118067 kcal Electronic energy + Delta-G solvation = -33072.313363 eV Core-core repulsion = 27900.995070 eV Total energy + Delta-G solvation = -5171.318293 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.134 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -51.23632 -48.76204 -48.71205 -42.33385 -41.54175 -40.34580 -38.87841 -37.84057 -34.71521 -33.25520 -32.45073 -32.06054 -31.90372 -29.44388 -27.80423 -26.68120 -25.52208 -24.79693 -24.00573 -22.56468 -22.05885 -21.34561 -20.99987 -20.18862 -19.59358 -19.52908 -19.40304 -18.99563 -18.27434 -17.32221 -17.06746 -16.59469 -16.39661 -16.34106 -16.23408 -15.88296 -15.55585 -15.51973 -15.33443 -15.18868 -15.15808 -14.95539 -14.87647 -14.69407 -14.64233 -14.51011 -14.31264 -14.25720 -14.05845 -13.99825 -13.81848 -13.59240 -13.42132 -13.21614 -12.77298 -12.73915 -12.37756 -12.19324 -11.89884 -11.85171 -11.74477 -11.23241 -10.97577 -10.81382 -10.09214 -10.03363 -9.91768 -9.78573 -8.95343 -4.85728 -0.13385 0.27047 1.10907 1.28321 1.61624 1.63595 1.66780 1.89698 1.90359 2.30034 2.40984 2.52678 2.68526 2.96300 3.35040 3.38196 3.46626 3.63877 3.68635 3.71017 3.80556 3.83873 3.88216 3.96374 4.06672 4.20682 4.23187 4.30820 4.39409 4.45734 4.51427 4.63456 4.67659 4.67900 4.78795 4.81165 4.86542 4.90188 5.02306 5.03793 5.15284 5.18655 5.21728 5.26890 5.30468 5.49185 5.66459 5.77712 5.99860 6.14403 6.43225 6.55611 6.68768 7.29975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.060 4.060 3 Si 0.789 3.211 4 C -0.019 4.019 5 C -0.201 4.201 6 C -0.200 4.200 7 C 0.033 3.967 8 C -0.067 4.067 9 C 0.514 3.486 10 O -0.574 6.574 11 N -0.700 5.700 12 C 0.115 3.885 13 H 0.082 0.918 14 C -0.144 4.144 15 C -0.068 4.068 16 H 0.122 0.878 17 C -0.039 4.039 18 C -0.122 4.122 19 C -0.078 4.078 20 C -0.203 4.203 21 C 0.506 3.494 22 F -0.184 7.184 23 F -0.183 7.183 24 F -0.182 7.182 25 C -0.078 4.078 26 C -0.117 4.117 27 C -0.124 4.124 28 N -0.537 5.537 29 H 0.388 0.612 30 H 0.118 0.882 31 H -0.281 1.281 32 H -0.297 1.297 33 H 0.151 0.849 34 H 0.141 0.859 35 H 0.144 0.856 36 H 0.128 0.872 37 H 0.419 0.581 38 H 0.069 0.931 39 H 0.095 0.905 40 H 0.149 0.851 41 H 0.140 0.860 42 H 0.142 0.858 43 H 0.158 0.842 44 H 0.099 0.901 45 H 0.092 0.908 46 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.721 0.401 -4.570 5.334 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.169 4.169 3 Si 0.692 3.308 4 C -0.133 4.133 5 C -0.226 4.226 6 C -0.225 4.225 7 C -0.081 4.081 8 C -0.107 4.107 9 C 0.301 3.699 10 O -0.453 6.453 11 N -0.353 5.353 12 C 0.010 3.990 13 H 0.100 0.900 14 C -0.182 4.182 15 C -0.086 4.086 16 H 0.140 0.860 17 C -0.039 4.039 18 C -0.139 4.139 19 C -0.096 4.096 20 C -0.204 4.204 21 C 0.452 3.548 22 F -0.166 7.166 23 F -0.164 7.164 24 F -0.164 7.164 25 C -0.096 4.096 26 C -0.134 4.134 27 C -0.162 4.162 28 N -0.132 5.132 29 H 0.237 0.763 30 H 0.136 0.864 31 H -0.207 1.207 32 H -0.225 1.225 33 H 0.168 0.832 34 H 0.159 0.841 35 H 0.162 0.838 36 H 0.146 0.854 37 H 0.256 0.744 38 H 0.087 0.913 39 H 0.113 0.887 40 H 0.167 0.833 41 H 0.158 0.842 42 H 0.160 0.840 43 H 0.176 0.824 44 H 0.117 0.883 45 H 0.110 0.890 46 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges -2.349 1.096 -3.391 4.268 hybrid contribution -1.184 -1.246 -0.292 1.744 sum -3.533 -0.150 -3.683 5.106 Atomic orbital electron populations 1.86541 1.18521 1.80569 1.50368 1.24930 0.83315 1.12167 0.96485 0.93275 0.90558 0.70336 0.76591 1.20895 1.06244 0.86024 1.00125 1.20909 1.04704 1.00828 0.96191 1.20849 1.05830 0.93329 1.02460 1.19942 1.01802 0.96779 0.89549 1.20249 0.97092 0.90158 1.03218 1.20986 0.87564 0.81529 0.79839 1.90763 1.47278 1.70839 1.36390 1.45541 1.25382 1.16459 1.47918 1.21841 0.88575 0.91641 0.96992 0.90011 1.23611 1.02971 0.95215 0.96425 1.21709 1.00753 0.88571 0.97593 0.86006 1.20166 0.93704 0.95794 0.94206 1.21244 0.96424 0.96420 0.99850 1.21117 0.99631 0.92220 0.96649 1.20025 1.00408 0.91108 1.08855 1.18542 0.75519 0.87378 0.73395 1.93218 1.73141 1.95435 1.54756 1.93182 1.78372 1.96576 1.48311 1.93183 1.57295 1.69696 1.96182 1.21168 0.93314 0.99179 0.95909 1.21352 1.01252 0.90866 0.99969 1.23370 1.00718 0.93301 0.98830 1.41878 1.41011 1.11045 1.19310 0.76293 0.86395 1.20691 1.22458 0.83186 0.84089 0.83828 0.85414 0.74372 0.91252 0.88700 0.83307 0.84235 0.83976 0.82443 0.88293 0.88960 0.74397 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.49 12.88 -148.98 -1.92 -3.41 16 2 C -0.06 -0.07 3.08 71.24 0.22 0.15 16 3 Si 0.79 -0.31 30.58 68.60 2.10 1.79 16 4 C -0.02 -0.06 6.51 41.08 0.27 0.21 16 5 C -0.20 -0.77 9.37 22.14 0.21 -0.57 16 6 C -0.20 -0.79 10.76 22.14 0.24 -0.55 16 7 C 0.03 0.04 5.66 41.08 0.23 0.27 16 8 C -0.07 0.45 6.24 29.10 0.18 0.63 16 9 C 0.51 -0.63 7.82 87.66 0.69 0.05 16 10 O -0.57 -5.65 15.64 -3.04 -0.05 -5.69 16 11 N -0.70 5.28 5.26 -439.60 -2.31 2.97 16 12 C 0.12 -0.63 4.34 45.61 0.20 -0.44 16 13 H 0.08 0.02 7.47 -2.39 -0.02 0.01 16 14 C -0.14 0.93 7.26 31.21 0.23 1.16 16 15 C -0.07 0.66 3.86 -11.01 -0.04 0.62 16 16 H 0.12 -1.61 8.10 -2.39 -0.02 -1.63 16 17 C -0.04 0.23 5.29 -19.87 -0.11 0.12 16 18 C -0.12 0.51 8.60 22.27 0.19 0.70 16 19 C -0.08 0.08 9.40 22.27 0.21 0.29 16 20 C -0.20 -0.21 5.45 -19.87 -0.11 -0.32 16 21 C 0.51 2.00 3.36 71.24 0.24 2.24 16 22 F -0.18 -1.07 17.30 44.97 0.78 -0.29 16 23 F -0.18 -0.98 16.46 44.97 0.74 -0.24 16 24 F -0.18 -0.90 16.46 44.97 0.74 -0.16 16 25 C -0.08 0.15 9.40 22.27 0.21 0.36 16 26 C -0.12 0.64 9.71 22.27 0.22 0.86 16 27 C -0.12 1.17 7.28 31.12 0.23 1.40 16 28 N -0.54 -0.81 6.07 -171.12 -1.04 -1.85 16 29 H 0.39 -1.00 8.70 -74.05 -0.64 -1.65 16 30 H 0.12 0.02 7.96 -2.38 -0.02 0.00 16 31 H -0.28 -0.99 7.11 99.48 0.71 -0.28 16 32 H -0.30 -1.82 7.11 99.48 0.71 -1.11 16 33 H 0.15 0.09 6.22 -2.91 -0.02 0.07 16 34 H 0.14 0.25 8.06 -2.91 -0.02 0.23 16 35 H 0.14 -1.70 8.14 -2.39 -0.02 -1.72 16 36 H 0.13 -1.56 8.14 -2.39 -0.02 -1.58 16 37 H 0.42 -6.05 8.70 -92.71 -0.81 -6.85 16 38 H 0.07 -0.33 8.14 -2.38 -0.02 -0.35 16 39 H 0.09 -0.58 6.32 -2.39 -0.02 -0.60 16 40 H 0.15 -1.11 6.68 -2.91 -0.02 -1.13 16 41 H 0.14 -0.36 7.61 -2.91 -0.02 -0.38 16 42 H 0.14 -0.55 7.60 -2.91 -0.02 -0.57 16 43 H 0.16 -1.67 8.06 -2.91 -0.02 -1.70 16 44 H 0.10 -0.86 7.71 -2.39 -0.02 -0.88 16 45 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 46 H 0.42 -0.77 8.96 -92.70 -0.83 -1.60 16 Total: 0.00 -23.86 398.98 1.37 -22.50 By element: Atomic # 1 Polarization: -21.63 SS G_CDS: -1.16 Total: -22.80 kcal Atomic # 6 Polarization: 3.69 SS G_CDS: 3.49 Total: 7.18 kcal Atomic # 7 Polarization: 4.47 SS G_CDS: -3.35 Total: 1.12 kcal Atomic # 8 Polarization: -7.14 SS G_CDS: -1.97 Total: -9.10 kcal Atomic # 9 Polarization: -2.95 SS G_CDS: 2.26 Total: -0.69 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: 2.10 Total: 1.79 kcal Total: -23.86 1.37 -22.50 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.623 kcal (2) G-P(sol) polarization free energy of solvation -23.861 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.484 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.495 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.118 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds