Wall clock time and date at job start Mon Mar 8 2021 05:13:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47264 * 2 1 4 4 C 1.50702 * 109.46923 * 239.99999 * 2 1 3 5 5 C 1.30888 * 118.38284 * 120.16730 * 4 2 1 6 6 N 1.38920 * 121.78568 * 180.56357 * 5 4 2 7 7 C 1.47029 * 118.88390 * 346.51475 * 6 5 4 8 8 C 1.53536 * 107.66109 * 43.66359 * 7 6 5 9 9 C 1.50209 * 118.54591 * 300.00358 * 4 2 1 10 10 C 1.50699 * 109.33008 * 39.66620 * 9 4 2 11 11 O 1.21276 * 119.99832 * 120.34831 * 10 9 4 12 12 N 1.34780 * 119.99807 * 300.34193 * 10 9 4 13 13 C 1.46504 * 119.99747 * 179.97438 * 12 10 9 14 14 H 1.08998 * 112.84746 * 336.20645 * 13 12 10 15 15 C 1.53954 * 113.61007 * 107.46932 * 13 12 10 16 16 C 1.53781 * 87.01606 * 89.20149 * 15 13 12 17 17 H 1.09002 * 113.61408 * 270.76947 * 16 15 13 18 18 C 1.50706 * 113.61527 * 139.95344 * 16 15 13 19 19 C 1.38240 * 119.99511 * 320.58826 * 18 16 15 20 20 C 1.38239 * 119.99439 * 179.78744 * 19 18 16 21 21 C 1.38233 * 120.00187 * 0.44683 * 20 19 18 22 22 C 1.50697 * 119.99944 * 179.83583 * 21 20 19 23 23 F 1.39906 * 109.46817 * 269.97307 * 22 21 20 24 24 F 1.39896 * 109.47218 * 29.96804 * 22 21 20 25 25 F 1.39901 * 109.47100 * 149.97459 * 22 21 20 26 26 C 1.38235 * 119.99957 * 359.80568 * 21 20 19 27 27 C 1.38235 * 120.00299 * 359.97438 * 26 21 20 28 28 C 1.53778 * 113.61429 * 205.00532 * 13 12 10 29 29 H 0.96702 * 114.00222 * 300.00120 * 1 2 3 30 30 H 1.09000 * 109.46966 * 120.00402 * 2 1 3 31 31 H 1.48498 * 110.00012 * 299.99883 * 3 2 1 32 32 H 1.48500 * 109.99852 * 61.31930 * 3 2 1 33 33 H 1.08006 * 119.13724 * 0.38762 * 5 4 2 34 34 H 0.97002 * 120.56056 * 166.49394 * 6 5 4 35 35 H 1.09007 * 109.82243 * 284.12631 * 7 6 5 36 36 H 1.09000 * 109.87595 * 163.23879 * 7 6 5 37 37 H 1.08999 * 109.63054 * 179.32865 * 8 7 6 38 38 H 1.09007 * 109.62031 * 58.77458 * 8 7 6 39 39 H 1.09005 * 109.32722 * 280.01217 * 9 4 2 40 40 H 0.96996 * 120.00265 * 0.02562 * 12 10 9 41 41 H 1.09005 * 113.66772 * 334.67730 * 15 13 12 42 42 H 1.08999 * 113.61605 * 203.72184 * 15 13 12 43 43 H 1.07998 * 120.00199 * 359.97438 * 19 18 16 44 44 H 1.08000 * 119.99490 * 180.27441 * 20 19 18 45 45 H 1.07995 * 119.99980 * 180.02562 * 26 21 20 46 46 H 1.07999 * 120.00568 * 180.02562 * 27 26 21 47 47 H 1.09000 * 113.61172 * 156.25384 * 28 13 12 48 48 H 1.08995 * 113.61431 * 25.35366 * 28 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.6842 -0.0451 -2.0693 6 7 3.1760 -0.6268 -3.2310 7 6 3.0998 -2.0874 -3.3813 8 6 1.7084 -2.5322 -2.9085 9 6 1.5484 -2.1483 -1.4357 10 6 0.1131 -2.3464 -1.0216 11 8 -0.7004 -2.7477 -1.8265 12 7 -0.2665 -2.0776 0.2435 13 6 -1.6621 -2.2696 0.6459 14 1 -2.3549 -2.2240 -0.1943 15 6 -1.8780 -3.4897 1.5595 16 6 -1.6113 -2.5479 2.7456 17 1 -0.5591 -2.4813 3.0223 18 6 -2.5127 -2.7955 3.9277 19 6 -3.8467 -3.0982 3.7281 20 6 -4.6726 -3.3296 4.8123 21 6 -4.1666 -3.2492 6.0962 22 6 -5.0677 -3.4979 7.2782 23 9 -5.6490 -2.2915 7.6833 24 9 -6.0727 -4.4014 6.9164 25 9 -4.3181 -4.0314 8.3320 26 6 -2.8338 -2.9414 6.2958 27 6 -2.0069 -2.7144 5.2116 28 6 -2.0841 -1.3980 1.8405 29 1 -0.3934 0.4417 0.7650 30 1 1.7923 -0.5139 0.8899 31 1 1.5615 2.4678 -1.2085 32 1 1.5879 2.4585 1.2242 33 1 2.9278 0.9849 -1.8542 34 1 3.5630 -0.0785 -3.9315 35 1 3.8672 -2.5624 -2.7700 36 1 3.2394 -2.3601 -4.4273 37 1 1.6126 -3.6125 -3.0177 38 1 0.9429 -2.0324 -3.5022 39 1 2.1909 -2.7833 -0.8256 40 1 0.3841 -1.7564 0.8872 41 1 -1.1218 -4.2656 1.4395 42 1 -2.8951 -3.8808 1.5326 43 1 -4.2430 -3.1569 2.7252 44 1 -5.7137 -3.5705 4.6563 45 1 -2.4384 -2.8790 7.2988 46 1 -0.9655 -2.4742 5.3675 47 1 -3.1577 -1.2161 1.8905 48 1 -1.4942 -0.4877 1.9468 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_15608500.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:13:02 Heat of formation + Delta-G solvation = -108.605105 kcal Electronic energy + Delta-G solvation = -35855.076920 eV Core-core repulsion = 30656.859662 eV Total energy + Delta-G solvation = -5198.217258 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.150 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -51.23960 -48.76492 -48.71500 -41.84939 -40.90160 -39.49617 -38.59679 -37.74378 -34.43874 -33.50960 -32.81359 -32.42510 -32.04206 -28.02944 -27.17581 -26.68904 -25.94839 -24.78164 -23.98926 -23.09582 -22.43035 -21.82812 -20.16939 -19.59831 -19.53479 -19.41903 -19.19566 -18.64629 -18.41386 -17.96251 -17.20877 -16.70658 -16.53036 -16.25484 -15.90197 -15.75263 -15.55689 -15.49454 -15.21895 -15.18951 -15.15445 -14.95800 -14.88397 -14.87453 -14.56269 -14.46562 -14.41376 -14.28360 -14.08884 -13.80290 -13.67285 -13.42677 -13.21729 -13.13537 -12.95060 -12.75767 -12.36058 -12.30087 -11.89190 -11.84050 -11.68561 -11.65502 -11.23408 -11.16263 -10.67264 -10.47076 -10.06790 -9.94333 -9.43238 -8.38268 -4.84623 -0.13381 0.26965 1.26927 1.47514 1.61290 1.64850 1.89373 2.06165 2.38253 2.41029 2.68167 2.69748 2.96083 3.34762 3.47425 3.54713 3.66651 3.71128 3.77511 3.85516 3.88175 3.90964 4.01263 4.07561 4.21080 4.28245 4.29705 4.31391 4.40053 4.42778 4.56716 4.67644 4.68496 4.73121 4.79518 4.84041 4.86167 4.88802 4.97475 5.04339 5.05159 5.17003 5.18484 5.24697 5.26857 5.32381 5.49769 5.53654 5.76917 5.81195 6.36729 6.67079 6.78180 6.98035 7.50234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.735 3.265 4 C -0.253 4.253 5 C 0.154 3.846 6 N -0.748 5.748 7 C 0.123 3.877 8 C -0.120 4.120 9 C -0.038 4.038 10 C 0.532 3.468 11 O -0.604 6.604 12 N -0.661 5.661 13 C 0.122 3.878 14 H 0.069 0.931 15 C -0.146 4.146 16 C -0.066 4.066 17 H 0.122 0.878 18 C -0.037 4.037 19 C -0.122 4.122 20 C -0.078 4.078 21 C -0.203 4.203 22 C 0.506 3.494 23 F -0.184 7.184 24 F -0.183 7.183 25 F -0.182 7.182 26 C -0.077 4.077 27 C -0.116 4.116 28 C -0.122 4.122 29 H 0.376 0.624 30 H 0.100 0.900 31 H -0.316 1.316 32 H -0.294 1.294 33 H 0.144 0.856 34 H 0.412 0.588 35 H 0.079 0.921 36 H 0.094 0.906 37 H 0.076 0.924 38 H 0.044 0.956 39 H 0.116 0.884 40 H 0.412 0.588 41 H 0.068 0.932 42 H 0.092 0.908 43 H 0.146 0.854 44 H 0.139 0.861 45 H 0.144 0.856 46 H 0.159 0.841 47 H 0.096 0.904 48 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.573 1.936 0.426 9.776 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.172 4.172 3 Si 0.643 3.357 4 C -0.263 4.263 5 C 0.032 3.968 6 N -0.379 5.379 7 C -0.001 4.001 8 C -0.159 4.159 9 C -0.059 4.059 10 C 0.320 3.680 11 O -0.486 6.486 12 N -0.314 5.314 13 C 0.016 3.984 14 H 0.087 0.913 15 C -0.184 4.184 16 C -0.084 4.084 17 H 0.140 0.860 18 C -0.037 4.037 19 C -0.140 4.140 20 C -0.096 4.096 21 C -0.204 4.204 22 C 0.452 3.548 23 F -0.166 7.166 24 F -0.165 7.165 25 F -0.163 7.163 26 C -0.095 4.095 27 C -0.133 4.133 28 C -0.160 4.160 29 H 0.227 0.773 30 H 0.118 0.882 31 H -0.245 1.245 32 H -0.222 1.222 33 H 0.161 0.839 34 H 0.248 0.752 35 H 0.097 0.903 36 H 0.113 0.887 37 H 0.095 0.905 38 H 0.063 0.937 39 H 0.134 0.866 40 H 0.252 0.748 41 H 0.087 0.913 42 H 0.111 0.889 43 H 0.164 0.836 44 H 0.157 0.843 45 H 0.161 0.839 46 H 0.177 0.823 47 H 0.114 0.886 48 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 8.880 2.035 -0.617 9.131 hybrid contribution -1.635 0.257 0.735 1.811 sum 7.244 2.292 0.117 7.599 Atomic orbital electron populations 1.87106 1.18805 1.77902 1.51289 1.24595 0.83981 1.09576 0.99088 0.94786 0.91528 0.73895 0.75449 1.19583 1.09077 0.95709 1.01966 1.20474 0.93113 0.96616 0.86618 1.44655 1.67419 1.07126 1.18659 1.21692 0.95331 0.80467 1.02640 1.21669 0.97994 1.01584 0.94691 1.19726 0.92351 0.95808 0.98032 1.20694 0.90661 0.74776 0.81848 1.90654 1.55646 1.49249 1.53028 1.45558 1.09663 1.64910 1.11248 1.21682 0.84167 0.96429 0.96148 0.91311 1.23616 1.02951 0.97021 0.94835 1.21688 0.99461 0.97003 0.90259 0.86048 1.20156 0.93971 0.94594 0.94963 1.21221 0.93447 1.00023 0.99299 1.21100 1.01178 0.96488 0.90882 1.20022 0.95659 1.12149 0.92594 1.18531 0.79117 0.73813 0.83344 1.93218 1.85643 1.45929 1.91774 1.93181 1.63176 1.68479 1.91625 1.93183 1.76189 1.86580 1.60339 1.21172 0.91299 0.95643 1.01370 1.21359 1.01263 0.99863 0.90858 1.23392 1.02814 0.97205 0.92581 0.77331 0.88197 1.24515 1.22184 0.83906 0.75193 0.90283 0.88726 0.90506 0.93716 0.86606 0.74772 0.91307 0.88943 0.83587 0.84334 0.83866 0.82313 0.88580 0.88892 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.50 7.70 -148.98 -1.15 0.35 16 2 C -0.06 0.38 1.82 71.24 0.13 0.51 16 3 Si 0.73 -3.54 29.66 68.60 2.04 -1.51 16 4 C -0.25 0.58 5.28 -16.53 -0.09 0.49 16 5 C 0.15 -0.50 9.61 83.64 0.80 0.30 16 6 N -0.75 3.40 5.83 -346.07 -2.02 1.38 16 7 C 0.12 -0.58 7.16 86.46 0.62 0.04 16 8 C -0.12 -0.20 4.91 30.79 0.15 -0.05 16 9 C -0.04 0.00 2.75 -12.43 -0.03 -0.03 16 10 C 0.53 2.99 6.30 87.66 0.55 3.54 16 11 O -0.60 -9.69 15.40 -3.02 -0.05 -9.73 16 12 N -0.66 1.25 2.72 -439.76 -1.20 0.06 16 13 C 0.12 -0.18 4.06 45.57 0.19 0.01 16 14 H 0.07 0.40 7.46 -2.39 -0.02 0.38 16 15 C -0.15 0.53 7.27 31.18 0.23 0.75 16 16 C -0.07 0.52 3.86 -11.01 -0.04 0.47 16 17 H 0.12 -1.40 8.09 -2.39 -0.02 -1.42 16 18 C -0.04 0.17 5.29 -19.86 -0.11 0.07 16 19 C -0.12 0.34 8.53 22.27 0.19 0.53 16 20 C -0.08 0.00 9.40 22.27 0.21 0.20 16 21 C -0.20 -0.37 5.45 -19.87 -0.11 -0.47 16 22 C 0.51 2.31 3.36 71.23 0.24 2.55 16 23 F -0.18 -1.18 17.30 44.97 0.78 -0.40 16 24 F -0.18 -1.10 16.46 44.97 0.74 -0.36 16 25 F -0.18 -0.98 16.46 44.97 0.74 -0.24 16 26 C -0.08 0.10 9.40 22.27 0.21 0.31 16 27 C -0.12 0.55 9.71 22.27 0.22 0.77 16 28 C -0.12 0.89 7.13 31.12 0.22 1.11 16 29 H 0.38 -3.37 6.80 -74.06 -0.50 -3.87 16 30 H 0.10 -1.28 7.06 -2.39 -0.02 -1.30 16 31 H -0.32 -1.52 7.11 99.48 0.71 -0.81 16 32 H -0.29 -0.04 7.11 99.48 0.71 0.66 16 33 H 0.14 -0.90 4.34 -2.91 -0.01 -0.92 16 34 H 0.41 -3.30 8.96 -92.71 -0.83 -4.13 16 35 H 0.08 -0.58 8.14 -2.38 -0.02 -0.59 16 36 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 37 H 0.08 0.13 8.14 -2.39 -0.02 0.11 16 38 H 0.04 0.39 7.76 -2.38 -0.02 0.37 16 39 H 0.12 -0.55 8.14 -2.38 -0.02 -0.57 16 40 H 0.41 -3.23 5.76 -92.71 -0.53 -3.77 16 41 H 0.07 -0.13 8.14 -2.38 -0.02 -0.15 16 42 H 0.09 -0.31 6.41 -2.39 -0.02 -0.32 16 43 H 0.15 -0.80 6.73 -2.91 -0.02 -0.82 16 44 H 0.14 -0.19 7.60 -2.91 -0.02 -0.22 16 45 H 0.14 -0.50 7.60 -2.91 -0.02 -0.52 16 46 H 0.16 -1.61 8.05 -2.91 -0.02 -1.63 16 47 H 0.10 -0.63 7.62 -2.39 -0.02 -0.65 16 48 H 0.09 -1.00 6.12 -2.39 -0.01 -1.02 16 Total: 0.00 -23.91 384.13 2.69 -21.22 By element: Atomic # 1 Polarization: -21.09 SS G_CDS: -0.77 Total: -21.86 kcal Atomic # 6 Polarization: 7.53 SS G_CDS: 3.58 Total: 11.10 kcal Atomic # 7 Polarization: 4.65 SS G_CDS: -3.21 Total: 1.44 kcal Atomic # 8 Polarization: -8.19 SS G_CDS: -1.19 Total: -9.39 kcal Atomic # 9 Polarization: -3.26 SS G_CDS: 2.26 Total: -1.01 kcal Atomic # 14 Polarization: -3.54 SS G_CDS: 2.04 Total: -1.51 kcal Total: -23.91 2.69 -21.22 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_15608500.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.386 kcal (2) G-P(sol) polarization free energy of solvation -23.911 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.297 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.692 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.219 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.605 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds