Wall clock time and date at job start Mon Mar 8 2021 05:13:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86304 * 109.47117 * 2 1 4 4 C 1.50696 * 109.47300 * 119.99708 * 2 1 3 5 5 C 1.38708 * 120.02796 * 74.99985 * 4 2 1 6 6 O 1.35899 * 120.05751 * 0.02562 * 5 4 2 7 7 C 1.42894 * 117.00336 * 179.97438 * 6 5 4 8 8 C 1.50699 * 109.47544 * 179.97438 * 7 6 5 9 9 O 1.21290 * 119.99643 * 359.97438 * 8 7 6 10 10 N 1.34775 * 120.00364 * 179.97438 * 8 7 6 11 11 C 1.46498 * 119.99900 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.85154 * 336.18913 * 11 10 8 13 13 C 1.53776 * 113.61843 * 107.50340 * 11 10 8 14 14 C 1.53776 * 87.08552 * 89.11302 * 13 11 10 15 15 H 1.09000 * 113.61292 * 270.88758 * 14 13 11 16 16 C 1.50692 * 113.61688 * 139.98046 * 14 13 11 17 17 C 1.38237 * 120.00266 * 322.23266 * 16 14 13 18 18 C 1.38237 * 120.00006 * 179.76274 * 17 16 14 19 19 C 1.38234 * 120.00121 * 0.48782 * 18 17 16 20 20 C 1.50700 * 119.99731 * 179.76693 * 19 18 17 21 21 F 1.39894 * 109.47222 * 270.02061 * 20 19 18 22 22 F 1.39902 * 109.47572 * 30.02451 * 20 19 18 23 23 F 1.39907 * 109.46785 * 150.02190 * 20 19 18 24 24 C 1.38229 * 119.99926 * 359.78634 * 19 18 17 25 25 C 1.38236 * 120.00260 * 359.96052 * 24 19 18 26 26 C 1.53785 * 87.07991 * 25.43529 * 14 13 11 27 27 C 1.38759 * 119.89010 * 179.97438 * 5 4 2 28 28 C 1.38119 * 119.94381 * 0.02562 * 27 5 4 29 29 C 1.38285 * 120.05710 * 359.97438 * 28 27 5 30 30 C 1.38171 * 120.03158 * 254.95817 * 4 2 1 31 31 H 0.96696 * 114.00465 * 300.00120 * 1 2 3 32 32 H 1.09001 * 109.47469 * 240.00199 * 2 1 3 33 33 H 1.48504 * 109.99607 * 299.99482 * 3 2 1 34 34 H 1.48495 * 110.00039 * 61.31366 * 3 2 1 35 35 H 1.09005 * 109.46979 * 299.99602 * 7 6 5 36 36 H 1.09002 * 109.47431 * 59.99436 * 7 6 5 37 37 H 0.96994 * 119.99979 * 359.97438 * 10 8 7 38 38 H 1.09004 * 113.61445 * 203.66591 * 13 11 10 39 39 H 1.09005 * 113.61261 * 334.56118 * 13 11 10 40 40 H 1.08002 * 119.99749 * 359.97438 * 17 16 14 41 41 H 1.08003 * 119.99795 * 180.25035 * 18 17 16 42 42 H 1.08001 * 120.00060 * 179.97438 * 24 19 18 43 43 H 1.07993 * 120.00179 * 179.97438 * 25 24 19 44 44 H 1.08995 * 113.61466 * 220.02433 * 26 14 13 45 45 H 1.09003 * 113.61497 * 89.11673 * 26 14 13 46 46 H 1.08001 * 120.03037 * 180.02562 * 27 5 4 47 47 H 1.07997 * 119.97310 * 179.97438 * 28 27 5 48 48 H 1.08000 * 119.95126 * 179.74932 * 29 28 27 49 49 H 1.08005 * 119.97031 * 0.02562 * 30 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.8696 -2.0939 1.3070 6 8 1.3567 -2.8107 0.2726 7 6 1.3251 -4.2316 0.4205 8 6 0.7276 -4.8523 -0.8160 9 8 0.3642 -4.1470 -1.7334 10 7 0.5971 -6.1909 -0.9023 11 6 0.0168 -6.7942 -2.1046 12 1 -0.6277 -6.1077 -2.6538 13 6 1.0460 -7.5171 -2.9894 14 6 0.7615 -8.7771 -2.1550 15 1 1.3969 -8.8703 -1.2743 16 6 0.7025 -10.0417 -2.9723 17 6 0.1305 -10.0255 -4.2307 18 6 0.0809 -11.1846 -4.9824 19 6 0.5942 -12.3621 -4.4717 20 6 0.5354 -13.6268 -5.2891 21 9 -0.6589 -14.3027 -5.0171 22 9 0.5901 -13.3057 -6.6497 23 9 1.6205 -14.4461 -4.9594 24 6 1.1612 -12.3796 -3.2111 25 6 1.2155 -11.2194 -2.4615 26 6 -0.6203 -8.1717 -1.8565 27 6 2.3335 -2.7451 2.4411 28 6 2.8548 -2.0144 3.4909 29 6 2.9152 -0.6351 3.4122 30 6 2.4545 0.0160 2.2830 31 1 -0.3934 0.4417 0.7650 32 1 1.7923 -0.5138 -0.8900 33 1 1.5614 2.4678 -1.2086 34 1 1.5877 2.4586 1.2241 35 1 2.3395 -4.6050 0.5609 36 1 0.7184 -4.4933 1.2874 37 1 0.8881 -6.7549 -0.1688 38 1 0.7402 -7.6054 -4.0319 39 1 2.0618 -7.1384 -2.8759 40 1 -0.2746 -9.1065 -4.6279 41 1 -0.3625 -11.1710 -5.9671 42 1 1.5619 -13.2997 -2.8120 43 1 1.6581 -11.2332 -1.4765 44 1 -0.9497 -8.3215 -0.8283 45 1 -1.3818 -8.4391 -2.5892 46 1 2.2870 -3.8223 2.5030 47 1 3.2156 -2.5207 4.3740 48 1 3.3194 -0.0652 4.2357 49 1 2.5030 1.0933 2.2238 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:13:13 Heat of formation + Delta-G solvation = -163.499785 kcal Electronic energy + Delta-G solvation = -36815.359530 eV Core-core repulsion = 31260.590917 eV Total energy + Delta-G solvation = -5554.768613 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.138 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -51.09994 -48.61866 -48.56212 -41.92083 -41.44752 -40.46523 -39.20811 -38.31816 -37.48810 -34.89041 -32.97012 -32.71746 -32.24525 -31.30818 -29.56685 -27.78727 -26.96845 -26.64276 -25.20006 -24.23838 -23.66871 -22.66431 -22.52289 -21.87104 -20.43144 -19.59083 -19.52595 -19.42084 -19.29571 -18.42791 -18.07403 -17.54927 -17.45000 -16.96682 -16.85291 -16.64752 -16.34692 -16.04613 -15.90513 -15.67311 -15.50402 -15.44438 -15.34410 -15.13613 -15.03438 -15.01390 -14.84943 -14.74850 -14.71464 -14.55594 -14.45920 -14.24557 -14.15324 -13.76265 -13.66171 -13.58388 -13.31994 -13.07074 -12.83909 -12.57476 -12.52235 -12.22750 -12.12583 -11.98120 -11.85481 -11.57899 -11.46887 -10.94819 -10.41814 -10.29203 -10.20422 -10.07650 -10.04051 -9.25155 -4.90671 -0.25036 0.11956 0.17244 0.36770 1.35891 1.36155 1.41846 1.61760 1.68198 2.02808 2.27200 2.47412 2.63821 2.73161 3.02703 3.18851 3.36353 3.39429 3.43731 3.48197 3.52022 3.62158 3.68523 3.70906 3.72856 3.74617 3.82248 3.85921 3.93162 3.98894 4.11509 4.21930 4.23023 4.30321 4.40860 4.47771 4.48397 4.52904 4.62847 4.64767 4.68192 4.77121 4.80436 4.88287 4.94789 5.03225 5.04759 5.21403 5.27438 5.28504 5.40484 5.44444 5.59859 5.64717 6.16739 6.32113 6.58030 7.03086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.065 4.065 3 Si 0.688 3.312 4 C -0.145 4.145 5 C 0.152 3.848 6 O -0.278 6.278 7 C 0.039 3.961 8 C 0.518 3.482 9 O -0.504 6.504 10 N -0.712 5.712 11 C 0.122 3.878 12 H 0.109 0.891 13 C -0.144 4.144 14 C -0.080 4.080 15 H 0.102 0.898 16 C -0.039 4.039 17 C -0.119 4.119 18 C -0.066 4.066 19 C -0.187 4.187 20 C 0.508 3.492 21 F -0.176 7.176 22 F -0.177 7.177 23 F -0.177 7.177 24 C -0.067 4.067 25 C -0.117 4.117 26 C -0.134 4.134 27 C -0.212 4.212 28 C -0.072 4.072 29 C -0.151 4.151 30 C -0.083 4.083 31 H 0.370 0.630 32 H 0.118 0.882 33 H -0.257 1.257 34 H -0.260 1.260 35 H 0.095 0.905 36 H 0.094 0.906 37 H 0.402 0.598 38 H 0.098 0.902 39 H 0.078 0.922 40 H 0.136 0.864 41 H 0.137 0.863 42 H 0.136 0.864 43 H 0.134 0.866 44 H 0.080 0.920 45 H 0.101 0.899 46 H 0.129 0.871 47 H 0.128 0.872 48 H 0.129 0.871 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.486 -0.875 6.321 7.271 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.175 4.175 3 Si 0.590 3.410 4 C -0.146 4.146 5 C 0.106 3.894 6 O -0.189 6.189 7 C -0.040 4.040 8 C 0.303 3.697 9 O -0.377 6.377 10 N -0.366 5.366 11 C 0.016 3.984 12 H 0.127 0.873 13 C -0.182 4.182 14 C -0.098 4.098 15 H 0.121 0.879 16 C -0.039 4.039 17 C -0.136 4.136 18 C -0.084 4.084 19 C -0.188 4.188 20 C 0.453 3.547 21 F -0.158 7.158 22 F -0.158 7.158 23 F -0.158 7.158 24 C -0.085 4.085 25 C -0.135 4.135 26 C -0.172 4.172 27 C -0.231 4.231 28 C -0.090 4.090 29 C -0.169 4.169 30 C -0.101 4.101 31 H 0.217 0.783 32 H 0.136 0.864 33 H -0.182 1.182 34 H -0.186 1.186 35 H 0.112 0.888 36 H 0.112 0.888 37 H 0.237 0.763 38 H 0.117 0.883 39 H 0.097 0.903 40 H 0.154 0.846 41 H 0.155 0.845 42 H 0.154 0.846 43 H 0.152 0.848 44 H 0.099 0.901 45 H 0.120 0.880 46 H 0.147 0.853 47 H 0.146 0.854 48 H 0.147 0.853 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.004 0.231 4.860 5.719 hybrid contribution -0.782 -1.188 1.028 1.755 sum 2.222 -0.957 5.888 6.366 Atomic orbital electron populations 1.86702 1.17562 1.79614 1.48672 1.24897 0.84014 1.10316 0.98237 0.95122 0.91443 0.74486 0.79957 1.19643 1.05576 0.90986 0.98438 1.18788 0.93121 0.90817 0.86691 1.86234 1.77446 1.16730 1.38512 1.22453 1.02510 0.81538 0.97450 1.20034 0.79067 0.82330 0.88277 1.90814 1.46829 1.60945 1.39095 1.45465 1.64801 1.06214 1.20122 1.21855 0.95654 0.94451 0.86408 0.87300 1.23590 1.00788 0.94374 0.99462 1.21716 0.98492 0.91093 0.98493 0.87940 1.19946 0.95036 0.94714 0.94182 1.21034 1.00232 0.98258 0.94104 1.20974 0.96174 0.91191 1.00060 1.19996 1.08447 0.93097 0.97277 1.18320 0.73859 0.84347 0.78130 1.93239 1.46916 1.82033 1.93567 1.93204 1.96075 1.92656 1.33861 1.93203 1.55383 1.74964 1.92282 1.20976 0.95794 0.99539 0.92182 1.21066 1.00486 0.91599 1.00338 1.23440 0.96230 0.93931 1.03593 1.21289 1.06500 1.00411 0.94885 1.21025 0.96247 0.94103 0.97669 1.21069 1.02700 0.94575 0.98552 1.21054 0.96520 0.99956 0.92559 0.78344 0.86417 1.18175 1.18551 0.88763 0.88834 0.76311 0.88341 0.90343 0.84577 0.84514 0.84571 0.84778 0.90129 0.88027 0.85291 0.85360 0.85308 0.84757 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.98 12.88 -35.23 -0.45 -2.43 16 2 C -0.06 -0.13 2.38 36.00 0.09 -0.05 16 3 Si 0.69 0.07 30.25 -169.99 -5.14 -5.07 16 4 C -0.15 -0.21 5.27 -104.47 -0.55 -0.76 16 5 C 0.15 0.25 6.66 -39.22 -0.26 -0.01 16 6 O -0.28 -0.78 9.00 -39.33 -0.35 -1.13 16 7 C 0.04 -0.05 5.22 36.00 0.19 0.14 16 8 C 0.52 0.41 7.91 -10.99 -0.09 0.32 16 9 O -0.50 -3.08 16.10 -14.36 -0.23 -3.31 16 10 N -0.71 1.95 5.26 -53.01 -0.28 1.67 16 11 C 0.12 -0.28 4.32 -67.12 -0.29 -0.57 16 12 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 13 C -0.14 0.41 7.25 -25.92 -0.19 0.22 16 14 C -0.08 0.31 3.86 -90.96 -0.35 -0.04 16 15 H 0.10 -0.53 8.10 -51.93 -0.42 -0.95 16 16 C -0.04 0.09 5.29 -104.62 -0.55 -0.46 16 17 C -0.12 0.22 8.60 -39.58 -0.34 -0.12 16 18 C -0.07 0.05 9.40 -39.58 -0.37 -0.33 16 19 C -0.19 -0.05 5.45 -104.63 -0.57 -0.63 16 20 C 0.51 0.76 3.36 36.01 0.12 0.88 16 21 F -0.18 -0.42 17.30 2.25 0.04 -0.39 16 22 F -0.18 -0.38 16.46 2.25 0.04 -0.34 16 23 F -0.18 -0.36 16.46 2.25 0.04 -0.33 16 24 C -0.07 0.05 9.40 -39.59 -0.37 -0.32 16 25 C -0.12 0.24 9.71 -39.58 -0.38 -0.14 16 26 C -0.13 0.52 7.29 -25.91 -0.19 0.34 16 27 C -0.21 0.13 9.04 -39.43 -0.36 -0.23 16 28 C -0.07 0.08 10.04 -39.61 -0.40 -0.32 16 29 C -0.15 0.13 10.04 -39.56 -0.40 -0.27 16 30 C -0.08 0.01 8.66 -39.60 -0.34 -0.33 16 31 H 0.37 0.12 8.70 45.56 0.40 0.52 16 32 H 0.12 0.34 7.83 -51.93 -0.41 -0.06 16 33 H -0.26 -0.91 7.11 56.52 0.40 -0.51 16 34 H -0.26 -0.30 6.69 56.52 0.38 0.08 16 35 H 0.09 -0.38 7.66 -51.93 -0.40 -0.78 16 36 H 0.09 -0.34 7.66 -51.93 -0.40 -0.74 16 37 H 0.40 -2.39 8.70 -40.82 -0.36 -2.75 16 38 H 0.10 -0.30 6.32 -51.93 -0.33 -0.63 16 39 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 40 H 0.14 -0.48 6.68 -52.49 -0.35 -0.83 16 41 H 0.14 -0.23 7.61 -52.48 -0.40 -0.63 16 42 H 0.14 -0.26 7.60 -52.49 -0.40 -0.66 16 43 H 0.13 -0.55 8.06 -52.49 -0.42 -0.97 16 44 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 45 H 0.10 -0.39 7.71 -51.93 -0.40 -0.79 16 46 H 0.13 -0.42 6.30 -52.49 -0.33 -0.75 16 47 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 48 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 49 H 0.14 -0.20 4.86 -52.48 -0.26 -0.45 16 LS Contribution 420.31 15.07 6.33 6.33 Total: 0.00 -10.53 420.31 -11.39 -21.92 By element: Atomic # 1 Polarization: -8.50 SS G_CDS: -5.77 Total: -14.27 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -5.61 Total: -2.66 kcal Atomic # 7 Polarization: 1.95 SS G_CDS: -0.28 Total: 1.67 kcal Atomic # 8 Polarization: -5.84 SS G_CDS: -1.04 Total: -6.88 kcal Atomic # 9 Polarization: -1.16 SS G_CDS: 0.11 Total: -1.05 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.14 Total: -5.07 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -10.53 -11.39 -21.92 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.581 kcal (2) G-P(sol) polarization free energy of solvation -10.530 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.111 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.919 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.500 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds