Wall clock time and date at job start Mon Mar 8 2021 05:13:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47098 * 2 1 4 4 C 1.50707 * 109.47180 * 240.00142 * 2 1 3 5 5 C 1.38262 * 119.94232 * 299.99743 * 4 2 1 6 6 C 1.38147 * 120.05400 * 179.97438 * 5 4 2 7 7 C 1.38729 * 119.94542 * 0.02562 * 6 5 4 8 8 O 1.35903 * 120.05603 * 179.97438 * 7 6 5 9 9 C 1.42901 * 116.99777 * 180.02562 * 8 7 6 10 10 C 1.52996 * 109.46995 * 180.02562 * 9 8 7 11 11 C 1.50702 * 109.47283 * 180.02562 * 10 9 8 12 12 O 1.21277 * 119.99733 * 359.97438 * 11 10 9 13 13 N 1.34778 * 119.99797 * 180.02562 * 11 10 9 14 14 C 1.46503 * 119.99418 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.85288 * 23.80409 * 14 13 11 16 16 C 1.53783 * 113.61007 * 154.99668 * 14 13 11 17 17 C 1.53786 * 87.08050 * 89.11544 * 16 14 13 18 18 H 1.09002 * 113.61357 * 270.88070 * 17 16 14 19 19 C 1.50697 * 113.61519 * 140.06465 * 17 16 14 20 20 C 1.38241 * 119.99978 * 301.25307 * 19 17 16 21 21 C 1.38229 * 120.00021 * 179.79218 * 20 19 17 22 22 C 1.38235 * 120.00266 * 0.46005 * 21 20 19 23 23 C 1.50697 * 120.00421 * 179.79218 * 22 21 20 24 24 F 1.39898 * 109.47183 * 269.97909 * 23 22 21 25 25 F 1.39897 * 109.47041 * 29.98318 * 23 22 21 26 26 F 1.39905 * 109.47173 * 149.97584 * 23 22 21 27 27 C 1.38238 * 119.99639 * 359.77255 * 22 21 20 28 28 C 1.38234 * 120.00267 * 121.52963 * 19 17 16 29 29 C 1.53781 * 87.17350 * 25.47154 * 17 16 14 30 30 C 1.38734 * 119.88708 * 0.27915 * 7 6 5 31 31 C 1.38145 * 119.94393 * 359.46331 * 30 7 6 32 32 H 0.96698 * 113.99999 * 60.00023 * 1 2 3 33 33 H 1.08997 * 109.47378 * 120.00067 * 2 1 3 34 34 H 1.48501 * 110.00229 * 298.68189 * 3 2 1 35 35 H 1.48499 * 110.00019 * 60.00140 * 3 2 1 36 36 H 1.08000 * 119.97526 * 359.97438 * 5 4 2 37 37 H 1.08009 * 120.02736 * 179.97438 * 6 5 4 38 38 H 1.09000 * 109.47237 * 60.00227 * 9 8 7 39 39 H 1.09001 * 109.47141 * 299.99811 * 9 8 7 40 40 H 1.08994 * 109.47311 * 59.99691 * 10 9 8 41 41 H 1.09004 * 109.46981 * 300.00371 * 10 9 8 42 42 H 0.96995 * 120.00261 * 359.97438 * 13 11 10 43 43 H 1.08992 * 113.61796 * 334.56401 * 16 14 13 44 44 H 1.09000 * 113.61157 * 203.65821 * 16 14 13 45 45 H 1.08001 * 119.99612 * 0.02562 * 20 19 17 46 46 H 1.08005 * 120.00416 * 180.25791 * 21 20 19 47 47 H 1.08003 * 120.00148 * 180.02562 * 27 22 21 48 48 H 1.07996 * 119.99951 * 359.97438 * 28 19 17 49 49 H 1.08999 * 113.61567 * 89.07405 * 29 17 16 50 50 H 1.08998 * 113.61196 * 219.97759 * 29 17 16 51 51 H 1.08000 * 120.02641 * 179.72464 * 30 7 6 52 52 H 1.07997 * 119.97309 * 180.23894 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5967 -2.0341 -1.4482 6 6 2.0555 -2.6874 -2.5756 7 6 2.8531 -2.0143 -3.4896 8 8 3.3061 -2.6550 -4.5992 9 6 4.1230 -1.8998 -5.4962 10 6 4.5335 -2.7817 -6.6771 11 6 5.3955 -1.9856 -7.6228 12 8 5.6555 -0.8268 -7.3766 13 7 5.8766 -2.5610 -8.7426 14 6 6.7151 -1.7872 -9.6615 15 1 7.2129 -0.9481 -9.1756 16 6 7.6581 -2.6538 -10.5128 17 6 6.5191 -2.7429 -11.5423 18 1 5.8417 -3.5798 -11.3727 19 6 6.9884 -2.6502 -12.9713 20 6 7.6830 -1.5343 -13.3998 21 6 8.1172 -1.4512 -14.7094 22 6 7.8487 -2.4796 -15.5933 23 6 8.3180 -2.3869 -17.0223 24 9 7.3287 -1.7748 -17.7993 25 9 9.4919 -1.6280 -17.0793 26 9 8.5693 -3.6720 -17.5149 27 6 7.1499 -3.5933 -15.1661 28 6 6.7194 -3.6783 -13.8553 29 6 6.0046 -1.4093 -10.9751 30 6 3.1927 -0.6880 -3.2657 31 6 2.7270 -0.0376 -2.1394 32 1 -0.3933 0.4417 -0.7650 33 1 1.7924 -0.5138 0.8899 34 1 1.5879 2.4586 -1.2242 35 1 1.5615 2.4678 1.2085 36 1 0.9761 -2.5579 -0.7362 37 1 1.7941 -3.7216 -2.7450 38 1 5.0146 -1.5549 -4.9726 39 1 3.5616 -1.0405 -5.8628 40 1 3.6417 -3.1263 -7.2005 41 1 5.0947 -3.6414 -6.3108 42 1 5.6684 -3.4877 -8.9396 43 1 7.9066 -3.6102 -10.0528 44 1 8.5345 -2.1175 -10.8767 45 1 7.8896 -0.7293 -12.7101 46 1 8.6635 -0.5813 -15.0431 47 1 6.9404 -4.3970 -15.8565 48 1 6.1733 -4.5482 -13.5217 49 1 6.4298 -0.5333 -11.4650 50 1 4.9191 -1.3617 -10.8881 51 1 3.8172 -0.1631 -3.9735 52 1 2.9879 0.9961 -1.9666 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_4549602.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:13:23 Heat of formation + Delta-G solvation = -172.328752 kcal Electronic energy + Delta-G solvation = -37769.876621 eV Core-core repulsion = 32059.187536 eV Total energy + Delta-G solvation = -5710.689085 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.154 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -51.23162 -48.75489 -48.70953 -41.69591 -41.27742 -40.50540 -39.29194 -38.85574 -37.29415 -34.77754 -33.43290 -32.59519 -32.09846 -31.95546 -31.36744 -27.97530 -26.69940 -26.64290 -25.76212 -24.85685 -24.03642 -23.50533 -22.43592 -22.21119 -21.53868 -20.19784 -19.59985 -19.55228 -19.50171 -19.38451 -18.46567 -17.94735 -17.47047 -17.18978 -17.06751 -16.74973 -16.38195 -16.33138 -16.17226 -15.98769 -15.85290 -15.64519 -15.54887 -15.47450 -15.16919 -15.05170 -14.93578 -14.87144 -14.73013 -14.64782 -14.52795 -14.41370 -14.34663 -14.29235 -14.04991 -13.99450 -13.49108 -13.44208 -13.23767 -12.85753 -12.85327 -12.73563 -12.37897 -12.29018 -12.05825 -11.90516 -11.78350 -11.75547 -11.60867 -11.23901 -11.05216 -10.60561 -10.12623 -10.05061 -10.03338 -9.92256 -9.21386 -4.93408 -0.13140 0.27343 0.28381 0.31104 1.31785 1.52314 1.58601 1.62129 1.70490 1.94166 2.41189 2.48655 2.65694 2.69030 2.96823 3.35472 3.43130 3.45198 3.56830 3.63783 3.68351 3.72526 3.83212 3.83795 3.88431 3.89562 3.91909 3.97104 4.03817 4.20491 4.26755 4.31128 4.35260 4.39359 4.45381 4.57376 4.64810 4.68011 4.68662 4.70667 4.78711 4.79873 4.85702 4.89165 4.98183 5.01721 5.03991 5.14616 5.18581 5.18878 5.20985 5.29206 5.47301 5.49518 5.63576 5.72546 5.77909 6.32682 6.47929 6.49080 7.17872 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.074 4.074 3 Si 0.758 3.242 4 C -0.159 4.159 5 C -0.059 4.059 6 C -0.159 4.159 7 C 0.124 3.876 8 O -0.321 6.321 9 C 0.072 3.928 10 C -0.133 4.133 11 C 0.522 3.478 12 O -0.582 6.582 13 N -0.698 5.698 14 C 0.114 3.886 15 H 0.086 0.914 16 C -0.125 4.125 17 C -0.070 4.070 18 H 0.121 0.879 19 C -0.039 4.039 20 C -0.121 4.121 21 C -0.078 4.078 22 C -0.202 4.202 23 C 0.506 3.494 24 F -0.185 7.185 25 F -0.183 7.183 26 F -0.182 7.182 27 C -0.078 4.078 28 C -0.117 4.117 29 C -0.143 4.143 30 C -0.210 4.210 31 C -0.080 4.080 32 H 0.385 0.615 33 H 0.126 0.874 34 H -0.287 1.287 35 H -0.302 1.302 36 H 0.140 0.860 37 H 0.142 0.858 38 H 0.068 0.932 39 H 0.064 0.936 40 H 0.127 0.873 41 H 0.128 0.872 42 H 0.419 0.581 43 H 0.091 0.909 44 H 0.101 0.899 45 H 0.151 0.849 46 H 0.140 0.860 47 H 0.142 0.858 48 H 0.157 0.843 49 H 0.097 0.903 50 H 0.070 0.930 51 H 0.140 0.860 52 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.567 -4.394 0.708 4.719 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.183 4.183 3 Si 0.664 3.336 4 C -0.160 4.160 5 C -0.077 4.077 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.235 6.235 9 C -0.004 4.004 10 C -0.172 4.172 11 C 0.310 3.690 12 O -0.462 6.462 13 N -0.350 5.350 14 C 0.008 3.992 15 H 0.105 0.895 16 C -0.162 4.162 17 C -0.088 4.088 18 H 0.139 0.861 19 C -0.039 4.039 20 C -0.139 4.139 21 C -0.096 4.096 22 C -0.204 4.204 23 C 0.452 3.548 24 F -0.166 7.166 25 F -0.164 7.164 26 F -0.163 7.163 27 C -0.096 4.096 28 C -0.135 4.135 29 C -0.182 4.182 30 C -0.228 4.228 31 C -0.097 4.097 32 H 0.234 0.766 33 H 0.144 0.856 34 H -0.213 1.213 35 H -0.230 1.230 36 H 0.158 0.842 37 H 0.160 0.840 38 H 0.086 0.914 39 H 0.082 0.918 40 H 0.145 0.855 41 H 0.146 0.854 42 H 0.257 0.743 43 H 0.110 0.890 44 H 0.119 0.881 45 H 0.168 0.832 46 H 0.158 0.842 47 H 0.160 0.840 48 H 0.175 0.825 49 H 0.115 0.885 50 H 0.089 0.911 51 H 0.158 0.842 52 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 1.631 -3.267 1.303 3.877 hybrid contribution -0.959 -0.073 -1.341 1.650 sum 0.673 -3.340 -0.038 3.407 Atomic orbital electron populations 1.86560 1.18616 1.80293 1.50175 1.25092 0.83304 1.11257 0.98673 0.94174 0.90597 0.72587 0.76266 1.20252 1.01985 0.95570 0.98148 1.20974 0.97033 0.93650 0.96063 1.20675 1.00947 1.01597 0.94483 1.19176 0.94471 0.91401 0.87103 1.85957 1.65250 1.40737 1.31555 1.22471 0.94149 0.94157 0.89617 1.21438 1.01948 0.99570 0.94258 1.20626 0.79589 0.86912 0.81863 1.90745 1.60418 1.19288 1.75741 1.45521 1.51401 1.16353 1.21717 1.21899 0.92413 0.95557 0.89283 0.89539 1.23379 0.96759 1.01351 0.94757 1.21729 0.98552 0.99618 0.88913 0.86141 1.20164 0.94534 0.93224 0.95948 1.21241 0.98407 0.99078 0.95126 1.21121 0.97478 0.97362 0.93667 1.20023 1.08362 1.00556 0.91411 1.18539 0.74917 0.73348 0.88023 1.93217 1.62124 1.83418 1.77868 1.93182 1.49677 1.76529 1.97005 1.93184 1.94238 1.39226 1.89687 1.21167 0.94735 0.96072 0.97642 1.21353 1.00257 0.99964 0.91923 1.23613 1.01269 0.97629 0.95656 1.21417 1.05924 0.94456 1.01042 1.20991 0.95871 0.99905 0.92975 0.76564 0.85608 1.21328 1.23024 0.84225 0.84009 0.91413 0.91804 0.85534 0.85357 0.74276 0.89030 0.88071 0.83174 0.84203 0.84033 0.82545 0.88471 0.91112 0.84214 0.83970 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.60 12.77 -148.98 -1.90 -3.51 16 2 C -0.07 0.00 2.82 71.24 0.20 0.20 16 3 Si 0.76 -0.67 29.78 68.60 2.04 1.37 16 4 C -0.16 -0.15 5.39 -19.85 -0.11 -0.26 16 5 C -0.06 -0.08 9.60 22.25 0.21 0.13 16 6 C -0.16 -0.32 9.99 22.37 0.22 -0.10 16 7 C 0.12 0.38 6.69 22.51 0.15 0.53 16 8 O -0.32 -0.57 10.14 -92.46 -0.94 -1.51 16 9 C 0.07 -0.08 4.03 71.98 0.29 0.21 16 10 C -0.13 0.92 6.07 29.85 0.18 1.10 16 11 C 0.52 -1.29 7.83 87.66 0.69 -0.61 16 12 O -0.58 -4.04 15.58 -3.02 -0.05 -4.09 16 13 N -0.70 5.62 5.26 -439.59 -2.31 3.31 16 14 C 0.11 -0.74 4.33 45.61 0.20 -0.54 16 15 H 0.09 -0.13 7.47 -2.39 -0.02 -0.15 16 16 C -0.12 1.26 7.29 31.12 0.23 1.48 16 17 C -0.07 0.70 3.85 -11.01 -0.04 0.66 16 18 H 0.12 -1.60 8.09 -2.39 -0.02 -1.62 16 19 C -0.04 0.24 5.29 -19.87 -0.11 0.13 16 20 C -0.12 0.58 8.55 22.27 0.19 0.77 16 21 C -0.08 0.11 9.40 22.27 0.21 0.32 16 22 C -0.20 -0.16 5.45 -19.87 -0.11 -0.26 16 23 C 0.51 1.88 3.36 71.24 0.24 2.12 16 24 F -0.18 -1.07 17.30 44.97 0.78 -0.30 16 25 F -0.18 -0.90 16.46 44.97 0.74 -0.16 16 26 F -0.18 -0.86 16.46 44.97 0.74 -0.11 16 27 C -0.08 0.16 9.40 22.27 0.21 0.36 16 28 C -0.12 0.66 9.71 22.27 0.22 0.87 16 29 C -0.14 1.04 7.27 31.21 0.23 1.27 16 30 C -0.21 -0.40 9.04 22.37 0.20 -0.20 16 31 C -0.08 -0.05 8.66 22.25 0.19 0.15 16 32 H 0.39 -0.88 8.70 -74.06 -0.64 -1.53 16 33 H 0.13 -0.24 7.96 -2.39 -0.02 -0.26 16 34 H -0.29 -0.95 7.11 99.48 0.71 -0.24 16 35 H -0.30 -2.02 7.11 99.48 0.71 -1.31 16 36 H 0.14 -0.06 8.06 -2.91 -0.02 -0.09 16 37 H 0.14 -0.07 8.06 -2.91 -0.02 -0.10 16 38 H 0.07 0.00 7.61 -2.39 -0.02 -0.02 16 39 H 0.06 0.03 7.63 -2.39 -0.02 0.01 16 40 H 0.13 -1.32 8.14 -2.39 -0.02 -1.34 16 41 H 0.13 -1.37 8.14 -2.38 -0.02 -1.39 16 42 H 0.42 -6.02 8.70 -92.71 -0.81 -6.83 16 43 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 44 H 0.10 -0.98 7.66 -2.39 -0.02 -1.00 16 45 H 0.15 -1.25 6.72 -2.91 -0.02 -1.27 16 46 H 0.14 -0.43 7.60 -2.91 -0.02 -0.45 16 47 H 0.14 -0.55 7.60 -2.91 -0.02 -0.57 16 48 H 0.16 -1.65 8.05 -2.91 -0.02 -1.67 16 49 H 0.10 -0.70 6.38 -2.39 -0.02 -0.71 16 50 H 0.07 -0.39 8.14 -2.39 -0.02 -0.40 16 51 H 0.14 0.01 6.30 -2.91 -0.02 -0.01 16 52 H 0.14 -0.43 4.87 -2.91 -0.01 -0.44 16 Total: 0.00 -21.52 442.03 2.39 -19.13 By element: Atomic # 1 Polarization: -22.07 SS G_CDS: -0.41 Total: -22.48 kcal Atomic # 6 Polarization: 4.65 SS G_CDS: 3.69 Total: 8.34 kcal Atomic # 7 Polarization: 5.62 SS G_CDS: -2.31 Total: 3.31 kcal Atomic # 8 Polarization: -6.21 SS G_CDS: -2.89 Total: -9.10 kcal Atomic # 9 Polarization: -2.83 SS G_CDS: 2.26 Total: -0.57 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: 2.04 Total: 1.37 kcal Total: -21.52 2.39 -19.13 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_4549602.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -153.198 kcal (2) G-P(sol) polarization free energy of solvation -21.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -174.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.131 kcal (6) G-S(sol) free energy of system = (1) + (5) -172.329 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds