Wall clock time and date at job start Mon Mar 8 2021 05:14:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.47083 * 2 1 4 4 C 1.50699 * 109.46919 * 119.99885 * 2 1 3 5 5 C 1.38264 * 119.94736 * 65.00038 * 4 2 1 6 6 C 1.38142 * 120.05865 * 179.97438 * 5 4 2 7 7 C 1.38735 * 119.94171 * 0.02562 * 6 5 4 8 8 O 1.35903 * 120.05315 * 179.97438 * 7 6 5 9 9 C 1.42898 * 116.99959 * 179.97438 * 8 7 6 10 10 F 1.39905 * 109.47271 * 300.00552 * 9 8 7 11 11 F 1.39900 * 109.47133 * 60.00305 * 9 8 7 12 12 C 1.50703 * 109.47171 * 180.02562 * 9 8 7 13 13 O 1.21273 * 119.99963 * 0.02562 * 12 9 8 14 14 N 1.34779 * 119.99944 * 180.02562 * 12 9 8 15 15 C 1.46499 * 119.99872 * 179.97438 * 14 12 9 16 16 H 1.08996 * 112.84806 * 25.33791 * 15 14 12 17 17 C 1.53780 * 113.61296 * 156.52999 * 15 14 12 18 18 C 1.53785 * 87.08055 * 89.11597 * 17 15 14 19 19 H 1.08995 * 113.61622 * 270.88601 * 18 17 15 20 20 C 1.50701 * 113.61154 * 139.97995 * 18 17 15 21 21 C 1.38235 * 120.00403 * 299.72629 * 20 18 17 22 22 C 1.38231 * 120.00508 * 179.81022 * 21 20 18 23 23 C 1.38240 * 119.99310 * 0.42413 * 22 21 20 24 24 C 1.50702 * 119.99558 * 179.79015 * 23 22 21 25 25 F 1.39902 * 109.46911 * 270.02151 * 24 23 22 26 26 F 1.39901 * 109.47428 * 30.01712 * 24 23 22 27 27 F 1.39904 * 109.47322 * 150.01973 * 24 23 22 28 28 C 1.38227 * 120.00557 * 359.80880 * 23 22 21 29 29 C 1.38235 * 119.99718 * 120.00252 * 20 18 17 30 30 C 1.53779 * 113.61513 * 254.13839 * 15 14 12 31 31 C 1.38732 * 119.88921 * 0.27344 * 7 6 5 32 32 C 1.38137 * 119.94340 * 359.42932 * 31 7 6 33 33 H 0.96697 * 113.99666 * 60.00061 * 1 2 3 34 34 H 1.09001 * 109.47109 * 239.99766 * 2 1 3 35 35 H 1.48496 * 110.00245 * 59.99613 * 3 2 1 36 36 H 1.48497 * 110.00068 * 181.31907 * 3 2 1 37 37 H 1.08001 * 119.96677 * 359.97438 * 5 4 2 38 38 H 1.07998 * 120.03062 * 180.02562 * 6 5 4 39 39 H 0.97000 * 119.99708 * 0.02562 * 14 12 9 40 40 H 1.09001 * 113.61816 * 203.66415 * 17 15 14 41 41 H 1.08998 * 113.61658 * 334.49024 * 17 15 14 42 42 H 1.08002 * 119.99639 * 0.02562 * 21 20 18 43 43 H 1.07998 * 120.00574 * 180.20650 * 22 21 20 44 44 H 1.07995 * 120.00453 * 179.97438 * 28 23 22 45 45 H 1.07998 * 120.00544 * 359.97438 * 29 20 18 46 46 H 1.09001 * 113.61271 * 25.43204 * 30 15 14 47 47 H 1.09003 * 113.61452 * 156.33631 * 30 15 14 48 48 H 1.08003 * 120.02290 * 179.72257 * 31 7 6 49 49 H 1.07998 * 119.97677 * 180.27924 * 32 31 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6840 -2.0605 1.3973 6 6 2.1438 -2.7141 2.5241 7 6 2.8539 -2.0145 3.4891 8 8 3.3069 -2.6551 4.5988 9 6 4.0309 -1.8720 5.5498 10 9 5.1666 -1.3293 4.9391 11 9 3.2148 -0.8375 6.0199 12 6 4.4506 -2.7453 6.7041 13 8 4.1590 -3.9224 6.7113 14 7 5.1502 -2.2181 7.7284 15 6 5.5578 -3.0669 8.8507 16 1 5.6445 -4.1182 8.5765 17 6 6.7757 -2.5283 9.6198 18 6 5.7794 -1.7534 10.4983 19 1 5.5367 -0.7629 10.1137 20 6 6.1459 -1.7416 11.9601 21 6 6.2473 -2.9311 12.6569 22 6 6.5873 -2.9206 13.9967 23 6 6.8172 -1.7198 14.6419 24 6 7.1832 -1.7080 16.1037 25 9 6.0188 -1.6317 16.8754 26 9 7.8764 -2.8812 16.4205 27 9 7.9943 -0.6001 16.3725 28 6 6.7111 -0.5300 13.9463 29 6 6.3750 -0.5408 12.6055 30 6 4.7400 -2.8296 10.1313 31 6 3.0954 -0.6585 3.3223 32 6 2.6387 -0.0109 2.1908 33 1 -0.3933 0.4417 -0.7650 34 1 1.7924 -0.5139 -0.8900 35 1 1.5615 2.4679 1.2084 36 1 3.5346 1.7703 -0.0321 37 1 1.1309 -2.6045 0.6460 38 1 1.9508 -3.7687 2.6538 39 1 5.3832 -1.2765 7.7228 40 1 7.3268 -3.2984 10.1596 41 1 7.4219 -1.8870 9.0205 42 1 6.0643 -3.8690 12.1536 43 1 6.6698 -3.8501 14.5403 44 1 6.8904 0.4081 14.4505 45 1 6.2918 0.3888 12.0621 46 1 3.7431 -2.4301 9.9449 47 1 4.7355 -3.6819 10.8107 48 1 3.6440 -0.1109 4.0743 49 1 2.8303 1.0436 2.0583 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_4549640.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:14:17 Heat of formation + Delta-G solvation = -256.943615 kcal Electronic energy + Delta-G solvation = -42458.886751 eV Core-core repulsion = 35961.158159 eV Total energy + Delta-G solvation = -6497.728593 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 444.119 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -51.11853 -50.87558 -48.85202 -48.63894 -48.57883 -42.01720 -41.33691 -40.75392 -39.43533 -38.97997 -37.32262 -35.24082 -32.98906 -32.50033 -32.28247 -32.09124 -29.30324 -27.86363 -27.09983 -26.31216 -25.27843 -24.55073 -24.16558 -22.95475 -22.54215 -22.35531 -20.70461 -20.63139 -19.79797 -19.66606 -19.57335 -19.43805 -19.29862 -18.46789 -18.21889 -17.67608 -17.12369 -17.04469 -16.77175 -16.48500 -16.36479 -16.29561 -16.04697 -15.77435 -15.70171 -15.46923 -15.42793 -15.36179 -15.29361 -15.12976 -15.09630 -15.02536 -14.86241 -14.81064 -14.73853 -14.63775 -14.56987 -14.47925 -14.33915 -14.27862 -13.91940 -13.82712 -13.67575 -13.53407 -13.10877 -12.91146 -12.64056 -12.48978 -12.20915 -12.14858 -12.10069 -11.97660 -11.60961 -11.57171 -10.65190 -10.39499 -10.24455 -10.18524 -10.13592 -9.54707 -5.03790 -0.28904 0.03768 0.08647 0.14982 0.42403 0.63401 1.21352 1.57879 1.65927 1.69712 1.90324 1.95983 2.23042 2.43528 2.65439 2.70882 2.99731 3.03800 3.19727 3.29164 3.31374 3.34225 3.42585 3.50351 3.52017 3.64301 3.65353 3.67828 3.83338 3.85282 4.04658 4.07394 4.15127 4.17079 4.24172 4.27867 4.37521 4.41144 4.47225 4.48555 4.51092 4.65362 4.69925 4.74942 4.76782 4.90720 4.96974 5.01276 5.03321 5.05923 5.30131 5.34270 5.36971 5.56133 5.68397 5.84230 6.32797 6.56310 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.069 4.069 3 Si 0.681 3.319 4 C -0.097 4.097 5 C -0.053 4.053 6 C -0.124 4.124 7 C 0.106 3.894 8 O -0.285 6.285 9 C 0.431 3.569 10 F -0.175 7.175 11 F -0.174 7.174 12 C 0.520 3.480 13 O -0.463 6.463 14 N -0.689 5.689 15 C 0.117 3.883 16 H 0.115 0.885 17 C -0.132 4.132 18 C -0.081 4.081 19 H 0.104 0.896 20 C -0.040 4.040 21 C -0.118 4.118 22 C -0.066 4.066 23 C -0.186 4.186 24 C 0.508 3.492 25 F -0.176 7.176 26 F -0.177 7.177 27 F -0.177 7.177 28 C -0.066 4.066 29 C -0.116 4.116 30 C -0.143 4.143 31 C -0.184 4.184 32 C -0.084 4.084 33 H 0.383 0.617 34 H 0.077 0.923 35 H -0.250 1.250 36 H -0.254 1.254 37 H 0.142 0.858 38 H 0.144 0.856 39 H 0.410 0.590 40 H 0.107 0.893 41 H 0.084 0.916 42 H 0.137 0.863 43 H 0.137 0.863 44 H 0.137 0.863 45 H 0.135 0.865 46 H 0.081 0.919 47 H 0.104 0.896 48 H 0.136 0.864 49 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.643 2.841 -4.566 5.416 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.179 4.179 3 Si 0.583 3.417 4 C -0.097 4.097 5 C -0.071 4.071 6 C -0.142 4.142 7 C 0.063 3.937 8 O -0.201 6.201 9 C 0.353 3.647 10 F -0.156 7.156 11 F -0.156 7.156 12 C 0.298 3.702 13 O -0.333 6.333 14 N -0.342 5.342 15 C 0.013 3.987 16 H 0.133 0.867 17 C -0.170 4.170 18 C -0.100 4.100 19 H 0.122 0.878 20 C -0.040 4.040 21 C -0.136 4.136 22 C -0.084 4.084 23 C -0.187 4.187 24 C 0.453 3.547 25 F -0.157 7.157 26 F -0.158 7.158 27 F -0.158 7.158 28 C -0.085 4.085 29 C -0.134 4.134 30 C -0.181 4.181 31 C -0.203 4.203 32 C -0.101 4.101 33 H 0.231 0.769 34 H 0.095 0.905 35 H -0.175 1.175 36 H -0.179 1.179 37 H 0.160 0.840 38 H 0.162 0.838 39 H 0.246 0.754 40 H 0.125 0.875 41 H 0.102 0.898 42 H 0.154 0.846 43 H 0.155 0.845 44 H 0.155 0.845 45 H 0.153 0.847 46 H 0.100 0.900 47 H 0.122 0.878 48 H 0.153 0.847 49 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 1.003 2.078 -3.490 4.184 hybrid contribution 0.344 0.501 0.533 0.809 sum 1.348 2.579 -2.957 4.149 Atomic orbital electron populations 1.86497 1.17085 1.81821 1.49758 1.24626 0.85817 1.10297 0.97196 0.95289 0.80852 0.78172 0.87432 1.19371 1.00090 0.94432 0.95803 1.20891 0.96380 0.93390 0.96403 1.20547 0.99695 1.01184 0.92788 1.18942 0.96818 0.91434 0.86457 1.86666 1.67900 1.36185 1.29344 1.21822 0.76562 0.79554 0.86713 1.93198 1.51510 1.86653 1.84259 1.93198 1.73250 1.60574 1.88563 1.19271 0.80581 0.87927 0.82411 1.90880 1.51556 1.14277 1.76584 1.45456 1.55001 1.14034 1.19714 1.22067 0.95880 0.96167 0.84620 0.86661 1.23441 0.95796 1.00529 0.97188 1.21792 0.97303 0.99916 0.90940 0.87769 1.19896 0.95792 0.93172 0.95109 1.21021 1.00511 0.98465 0.93618 1.20973 0.95460 0.96938 0.95022 1.20007 1.10178 0.96627 0.91893 1.18318 0.74739 0.73679 0.87926 1.93244 1.48766 1.95935 1.77783 1.93204 1.79921 1.48547 1.94118 1.93204 1.73852 1.53756 1.94998 1.20984 0.95715 0.97101 0.94652 1.21075 1.00154 0.98212 0.93937 1.23658 0.98751 0.99266 0.96441 1.21400 1.05144 0.93206 1.00546 1.20681 0.97478 0.98976 0.92989 0.76910 0.90542 1.17500 1.17870 0.84022 0.83848 0.75360 0.87485 0.89778 0.84553 0.84473 0.84527 0.84733 0.90010 0.87804 0.84673 0.85696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.06 12.81 -35.23 -0.45 -0.39 16 2 C -0.07 0.02 2.79 36.01 0.10 0.12 16 3 Si 0.68 -0.83 29.85 -169.99 -5.07 -5.90 16 4 C -0.10 -0.22 5.39 -104.60 -0.56 -0.78 16 5 C -0.05 -0.09 9.68 -39.61 -0.38 -0.48 16 6 C -0.12 -0.29 9.99 -39.43 -0.39 -0.69 16 7 C 0.11 0.38 6.48 -39.22 -0.25 0.13 16 8 O -0.28 -1.13 9.60 -39.35 -0.38 -1.51 16 9 C 0.43 0.81 2.05 36.01 0.07 0.88 16 10 F -0.17 -0.22 15.31 2.25 0.03 -0.19 16 11 F -0.17 -0.25 15.27 2.25 0.03 -0.21 16 12 C 0.52 0.70 7.34 -10.98 -0.08 0.62 16 13 O -0.46 -2.12 16.12 -14.35 -0.23 -2.35 16 14 N -0.69 1.51 5.26 -53.02 -0.28 1.23 16 15 C 0.12 -0.35 4.30 -67.12 -0.29 -0.64 16 16 H 0.12 -0.22 7.50 -51.93 -0.39 -0.61 16 17 C -0.13 0.60 7.29 -25.92 -0.19 0.41 16 18 C -0.08 0.34 3.87 -90.81 -0.35 -0.01 16 19 H 0.10 -0.53 8.10 -51.93 -0.42 -0.95 16 20 C -0.04 0.10 5.29 -104.62 -0.55 -0.45 16 21 C -0.12 0.28 8.63 -39.59 -0.34 -0.06 16 22 C -0.07 0.07 9.40 -39.58 -0.37 -0.30 16 23 C -0.19 -0.01 5.45 -104.62 -0.57 -0.58 16 24 C 0.51 0.68 3.36 36.01 0.12 0.80 16 25 F -0.18 -0.42 17.30 2.25 0.04 -0.38 16 26 F -0.18 -0.33 16.46 2.25 0.04 -0.30 16 27 F -0.18 -0.34 16.46 2.25 0.04 -0.30 16 28 C -0.07 0.06 9.40 -39.58 -0.37 -0.31 16 29 C -0.12 0.25 9.71 -39.58 -0.38 -0.14 16 30 C -0.14 0.49 7.27 -25.78 -0.19 0.31 16 31 C -0.18 -0.58 8.26 -39.44 -0.33 -0.90 16 32 C -0.08 -0.24 8.66 -39.60 -0.34 -0.58 16 33 H 0.38 -1.98 8.74 45.56 0.40 -1.58 16 34 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 35 H -0.25 -0.48 7.05 56.52 0.40 -0.09 16 36 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 37 H 0.14 -0.03 8.06 -52.49 -0.42 -0.45 16 38 H 0.14 0.11 8.06 -52.49 -0.42 -0.32 16 39 H 0.41 -1.84 8.70 -40.82 -0.36 -2.20 16 40 H 0.11 -0.52 7.73 -51.93 -0.40 -0.92 16 41 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 42 H 0.14 -0.59 6.64 -52.49 -0.35 -0.93 16 43 H 0.14 -0.29 7.60 -52.49 -0.40 -0.68 16 44 H 0.14 -0.26 7.60 -52.49 -0.40 -0.66 16 45 H 0.13 -0.54 8.06 -52.49 -0.42 -0.96 16 46 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 47 H 0.10 -0.42 6.30 -51.93 -0.33 -0.75 16 48 H 0.14 0.28 5.10 -52.48 -0.27 0.01 16 49 H 0.13 0.25 4.86 -52.49 -0.26 -0.01 16 LS Contribution 430.51 15.07 6.49 6.49 Total: 0.00 -9.22 430.51 -10.29 -19.51 By element: Atomic # 1 Polarization: -8.16 SS G_CDS: -4.89 Total: -13.05 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: -5.66 Total: -2.65 kcal Atomic # 7 Polarization: 1.51 SS G_CDS: -0.28 Total: 1.23 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -1.06 Total: -4.24 kcal Atomic # 9 Polarization: -1.56 SS G_CDS: 0.18 Total: -1.38 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.07 Total: -5.90 kcal Total LS contribution 6.49 Total: 6.49 kcal Total: -9.22 -10.29 -19.51 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_4549640.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -237.433 kcal (2) G-P(sol) polarization free energy of solvation -9.215 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -246.649 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.295 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -256.944 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds