Wall clock time and date at job start Mon Mar 8 2021 05:14:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86298 * 109.47083 * 2 1 4 4 C 1.50699 * 109.46919 * 119.99885 * 2 1 3 5 5 C 1.38264 * 119.94736 * 65.00038 * 4 2 1 6 6 C 1.38142 * 120.05865 * 179.97438 * 5 4 2 7 7 C 1.38735 * 119.94171 * 0.02562 * 6 5 4 8 8 O 1.35903 * 120.05315 * 179.97438 * 7 6 5 9 9 C 1.42898 * 116.99959 * 179.97438 * 8 7 6 10 10 F 1.39905 * 109.47271 * 300.00552 * 9 8 7 11 11 F 1.39900 * 109.47133 * 60.00305 * 9 8 7 12 12 C 1.50703 * 109.47171 * 180.02562 * 9 8 7 13 13 O 1.21273 * 119.99963 * 0.02562 * 12 9 8 14 14 N 1.34779 * 119.99944 * 180.02562 * 12 9 8 15 15 C 1.46499 * 119.99872 * 179.97438 * 14 12 9 16 16 H 1.08996 * 112.84806 * 25.33791 * 15 14 12 17 17 C 1.53780 * 113.61296 * 156.52999 * 15 14 12 18 18 C 1.53785 * 87.08055 * 89.11597 * 17 15 14 19 19 H 1.08995 * 113.61622 * 270.88601 * 18 17 15 20 20 C 1.50701 * 113.61154 * 139.97995 * 18 17 15 21 21 C 1.38235 * 120.00403 * 299.72629 * 20 18 17 22 22 C 1.38231 * 120.00508 * 179.81022 * 21 20 18 23 23 C 1.38240 * 119.99310 * 0.42413 * 22 21 20 24 24 C 1.50702 * 119.99558 * 179.79015 * 23 22 21 25 25 F 1.39902 * 109.46911 * 270.02151 * 24 23 22 26 26 F 1.39901 * 109.47428 * 30.01712 * 24 23 22 27 27 F 1.39904 * 109.47322 * 150.01973 * 24 23 22 28 28 C 1.38227 * 120.00557 * 359.80880 * 23 22 21 29 29 C 1.38235 * 119.99718 * 120.00252 * 20 18 17 30 30 C 1.53779 * 113.61513 * 254.13839 * 15 14 12 31 31 C 1.38732 * 119.88921 * 0.27344 * 7 6 5 32 32 C 1.38137 * 119.94340 * 359.42932 * 31 7 6 33 33 H 0.96697 * 113.99666 * 60.00061 * 1 2 3 34 34 H 1.09001 * 109.47109 * 239.99766 * 2 1 3 35 35 H 1.48496 * 110.00245 * 59.99613 * 3 2 1 36 36 H 1.48497 * 110.00068 * 181.31907 * 3 2 1 37 37 H 1.08001 * 119.96677 * 359.97438 * 5 4 2 38 38 H 1.07998 * 120.03062 * 180.02562 * 6 5 4 39 39 H 0.97000 * 119.99708 * 0.02562 * 14 12 9 40 40 H 1.09001 * 113.61816 * 203.66415 * 17 15 14 41 41 H 1.08998 * 113.61658 * 334.49024 * 17 15 14 42 42 H 1.08002 * 119.99639 * 0.02562 * 21 20 18 43 43 H 1.07998 * 120.00574 * 180.20650 * 22 21 20 44 44 H 1.07995 * 120.00453 * 179.97438 * 28 23 22 45 45 H 1.07998 * 120.00544 * 359.97438 * 29 20 18 46 46 H 1.09001 * 113.61271 * 25.43204 * 30 15 14 47 47 H 1.09003 * 113.61452 * 156.33631 * 30 15 14 48 48 H 1.08003 * 120.02290 * 179.72257 * 31 7 6 49 49 H 1.07998 * 119.97677 * 180.27924 * 32 31 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6840 -2.0605 1.3973 6 6 2.1438 -2.7141 2.5241 7 6 2.8539 -2.0145 3.4891 8 8 3.3069 -2.6551 4.5988 9 6 4.0309 -1.8720 5.5498 10 9 5.1666 -1.3293 4.9391 11 9 3.2148 -0.8375 6.0199 12 6 4.4506 -2.7453 6.7041 13 8 4.1590 -3.9224 6.7113 14 7 5.1502 -2.2181 7.7284 15 6 5.5578 -3.0669 8.8507 16 1 5.6445 -4.1182 8.5765 17 6 6.7757 -2.5283 9.6198 18 6 5.7794 -1.7534 10.4983 19 1 5.5367 -0.7629 10.1137 20 6 6.1459 -1.7416 11.9601 21 6 6.2473 -2.9311 12.6569 22 6 6.5873 -2.9206 13.9967 23 6 6.8172 -1.7198 14.6419 24 6 7.1832 -1.7080 16.1037 25 9 6.0188 -1.6317 16.8754 26 9 7.8764 -2.8812 16.4205 27 9 7.9943 -0.6001 16.3725 28 6 6.7111 -0.5300 13.9463 29 6 6.3750 -0.5408 12.6055 30 6 4.7400 -2.8296 10.1313 31 6 3.0954 -0.6585 3.3223 32 6 2.6387 -0.0109 2.1908 33 1 -0.3933 0.4417 -0.7650 34 1 1.7924 -0.5139 -0.8900 35 1 1.5615 2.4679 1.2084 36 1 3.5346 1.7703 -0.0321 37 1 1.1309 -2.6045 0.6460 38 1 1.9508 -3.7687 2.6538 39 1 5.3832 -1.2765 7.7228 40 1 7.3268 -3.2984 10.1596 41 1 7.4219 -1.8870 9.0205 42 1 6.0643 -3.8690 12.1536 43 1 6.6698 -3.8501 14.5403 44 1 6.8904 0.4081 14.4505 45 1 6.2918 0.3888 12.0621 46 1 3.7431 -2.4301 9.9449 47 1 4.7355 -3.6819 10.8107 48 1 3.6440 -0.1109 4.0743 49 1 2.8303 1.0436 2.0583 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_4549640.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:14:15 Heat of formation + Delta-G solvation = -252.613803 kcal Electronic energy + Delta-G solvation = -42458.698997 eV Core-core repulsion = 35961.158159 eV Total energy + Delta-G solvation = -6497.540838 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 444.119 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -51.24311 -51.00461 -48.97691 -48.76706 -48.72108 -41.89949 -41.47167 -40.72313 -39.43254 -38.97489 -37.30348 -35.20223 -32.88648 -32.61058 -32.22239 -32.09945 -29.36145 -27.81238 -26.79497 -26.35280 -25.23615 -24.60863 -24.02991 -22.98429 -22.50319 -22.41194 -20.78406 -20.54050 -19.81305 -19.80091 -19.59372 -19.52584 -19.38372 -18.40424 -18.27964 -17.64230 -17.17246 -16.93110 -16.69868 -16.53300 -16.44075 -16.25434 -15.95896 -15.84586 -15.82872 -15.56437 -15.51686 -15.48024 -15.36293 -15.22741 -15.17965 -15.03105 -14.95333 -14.88326 -14.78770 -14.55191 -14.54309 -14.42509 -14.40266 -14.15087 -14.02444 -13.73751 -13.54964 -13.35409 -13.25433 -12.84881 -12.59906 -12.42496 -12.21383 -12.03064 -11.98376 -11.92572 -11.65889 -11.34869 -10.54953 -10.36026 -10.31459 -10.07617 -9.96704 -9.69911 -4.96808 -0.15270 -0.12194 -0.01180 0.25889 0.35548 0.54032 1.28185 1.56135 1.60869 1.62143 1.89967 1.94583 2.30021 2.38913 2.66786 2.68006 2.95540 3.10963 3.27730 3.30392 3.34001 3.41429 3.51448 3.54177 3.58375 3.77517 3.83395 3.86933 3.88236 3.93463 4.08502 4.12244 4.24422 4.28933 4.35300 4.43067 4.45658 4.63651 4.67207 4.68321 4.73015 4.73624 4.77703 4.87784 4.92726 4.97062 4.99255 5.15317 5.17467 5.20501 5.24093 5.29079 5.52737 5.68591 5.75873 5.76987 6.38262 6.91465 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.073 4.073 3 Si 0.769 3.231 4 C -0.109 4.109 5 C -0.054 4.054 6 C -0.130 4.130 7 C 0.087 3.913 8 O -0.301 6.301 9 C 0.431 3.569 10 F -0.172 7.172 11 F -0.173 7.173 12 C 0.522 3.478 13 O -0.502 6.502 14 N -0.669 5.669 15 C 0.109 3.891 16 H 0.104 0.896 17 C -0.120 4.120 18 C -0.075 4.075 19 H 0.118 0.882 20 C -0.038 4.038 21 C -0.119 4.119 22 C -0.077 4.077 23 C -0.202 4.202 24 C 0.505 3.495 25 F -0.185 7.185 26 F -0.182 7.182 27 F -0.182 7.182 28 C -0.078 4.078 29 C -0.118 4.118 30 C -0.142 4.142 31 C -0.193 4.193 32 C -0.100 4.100 33 H 0.405 0.595 34 H 0.102 0.898 35 H -0.298 1.298 36 H -0.288 1.288 37 H 0.163 0.837 38 H 0.156 0.844 39 H 0.423 0.577 40 H 0.114 0.886 41 H 0.094 0.906 42 H 0.155 0.845 43 H 0.142 0.858 44 H 0.141 0.859 45 H 0.155 0.845 46 H 0.072 0.928 47 H 0.111 0.889 48 H 0.139 0.861 49 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.531 3.153 -5.955 6.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.184 4.184 3 Si 0.675 3.325 4 C -0.110 4.110 5 C -0.071 4.071 6 C -0.148 4.148 7 C 0.044 3.956 8 O -0.218 6.218 9 C 0.353 3.647 10 F -0.154 7.154 11 F -0.154 7.154 12 C 0.300 3.700 13 O -0.375 6.375 14 N -0.322 5.322 15 C 0.005 3.995 16 H 0.122 0.878 17 C -0.158 4.158 18 C -0.093 4.093 19 H 0.136 0.864 20 C -0.038 4.038 21 C -0.136 4.136 22 C -0.095 4.095 23 C -0.203 4.203 24 C 0.451 3.549 25 F -0.166 7.166 26 F -0.163 7.163 27 F -0.164 7.164 28 C -0.096 4.096 29 C -0.136 4.136 30 C -0.180 4.180 31 C -0.212 4.212 32 C -0.118 4.118 33 H 0.256 0.744 34 H 0.120 0.880 35 H -0.226 1.226 36 H -0.216 1.216 37 H 0.181 0.819 38 H 0.173 0.827 39 H 0.262 0.738 40 H 0.133 0.867 41 H 0.112 0.888 42 H 0.173 0.827 43 H 0.160 0.840 44 H 0.159 0.841 45 H 0.172 0.828 46 H 0.091 0.909 47 H 0.129 0.871 48 H 0.157 0.843 49 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 0.893 2.421 -4.890 5.529 hybrid contribution 0.382 0.449 1.000 1.160 sum 1.274 2.870 -3.891 5.000 Atomic orbital electron populations 1.86443 1.16945 1.82398 1.51522 1.24727 0.86069 1.10652 0.96904 0.94402 0.77448 0.75813 0.84787 1.19795 0.99633 0.94975 0.96557 1.21174 0.96064 0.93374 0.96524 1.20830 0.99297 1.01890 0.92773 1.19181 0.97716 0.91808 0.86887 1.86643 1.68313 1.37056 1.29770 1.21905 0.76480 0.79621 0.86644 1.93196 1.51277 1.86612 1.84279 1.93194 1.73272 1.60496 1.88480 1.19268 0.80677 0.87340 0.82722 1.90859 1.53543 1.15701 1.77445 1.45438 1.53203 1.14798 1.18772 1.22201 0.97241 0.95674 0.84355 0.87752 1.23418 0.95184 1.00609 0.96568 1.21818 0.96964 1.00472 0.90023 0.86395 1.20085 0.95012 0.92940 0.95779 1.21266 0.99740 0.99519 0.93116 1.21139 0.95818 0.96787 0.95778 1.20032 1.11653 0.97604 0.91003 1.18551 0.74324 0.73260 0.88727 1.93219 1.49240 1.95959 1.78222 1.93184 1.80043 1.48857 1.94263 1.93183 1.74020 1.54050 1.95129 1.21147 0.96143 0.96968 0.95381 1.21339 0.99440 0.99303 0.93486 1.23672 0.98379 0.99835 0.96118 1.21502 1.05454 0.93305 1.00914 1.20854 0.98221 0.99267 0.93453 0.74359 0.88019 1.22562 1.21561 0.81930 0.82674 0.73833 0.86750 0.88763 0.82699 0.84047 0.84145 0.82781 0.90889 0.87096 0.84341 0.85599 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.89 12.81 -148.98 -1.91 -1.01 16 2 C -0.07 0.13 2.79 71.24 0.20 0.32 16 3 Si 0.77 -1.94 29.85 68.60 2.05 0.11 16 4 C -0.11 -0.49 5.39 -19.85 -0.11 -0.59 16 5 C -0.05 -0.17 9.68 22.25 0.22 0.04 16 6 C -0.13 -0.68 9.99 22.37 0.22 -0.46 16 7 C 0.09 0.73 6.48 22.51 0.15 0.87 16 8 O -0.30 -2.81 9.60 -73.42 -0.71 -3.51 16 9 C 0.43 2.02 2.05 71.24 0.15 2.16 16 10 F -0.17 -0.56 15.31 44.97 0.69 0.13 16 11 F -0.17 -0.63 15.27 44.97 0.69 0.06 16 12 C 0.52 1.78 7.34 87.66 0.64 2.43 16 13 O -0.50 -5.27 16.12 16.03 0.26 -5.01 16 14 N -0.67 3.11 5.26 -440.05 -2.32 0.80 16 15 C 0.11 -0.72 4.30 45.52 0.20 -0.52 16 16 H 0.10 -0.38 7.50 -2.39 -0.02 -0.40 16 17 C -0.12 1.29 7.29 31.12 0.23 1.51 16 18 C -0.07 0.74 3.87 -10.92 -0.04 0.70 16 19 H 0.12 -1.46 8.10 -2.39 -0.02 -1.48 16 20 C -0.04 0.25 5.29 -19.87 -0.11 0.14 16 21 C -0.12 0.66 8.63 22.27 0.19 0.86 16 22 C -0.08 0.15 9.40 22.27 0.21 0.36 16 23 C -0.20 -0.14 5.45 -19.87 -0.11 -0.25 16 24 C 0.51 1.91 3.36 71.24 0.24 2.15 16 25 F -0.18 -1.10 17.30 44.97 0.78 -0.32 16 26 F -0.18 -0.89 16.46 44.97 0.74 -0.15 16 27 F -0.18 -0.90 16.46 44.97 0.74 -0.16 16 28 C -0.08 0.14 9.40 22.27 0.21 0.35 16 29 C -0.12 0.63 9.71 22.27 0.22 0.84 16 30 C -0.14 1.10 7.27 31.21 0.23 1.33 16 31 C -0.19 -1.45 8.26 22.36 0.18 -1.26 16 32 C -0.10 -0.67 8.66 22.25 0.19 -0.47 16 33 H 0.40 -4.93 8.74 -74.06 -0.65 -5.58 16 34 H 0.10 -0.67 7.96 -2.39 -0.02 -0.68 16 35 H -0.30 -1.54 7.05 99.48 0.70 -0.84 16 36 H -0.29 -0.87 7.11 99.48 0.71 -0.16 16 37 H 0.16 -0.28 8.06 -2.91 -0.02 -0.30 16 38 H 0.16 0.29 8.06 -2.91 -0.02 0.27 16 39 H 0.42 -4.19 8.70 -92.71 -0.81 -4.99 16 40 H 0.11 -1.32 7.73 -2.39 -0.02 -1.34 16 41 H 0.09 -1.13 8.14 -2.39 -0.02 -1.15 16 42 H 0.16 -1.54 6.64 -2.91 -0.02 -1.56 16 43 H 0.14 -0.52 7.60 -2.91 -0.02 -0.54 16 44 H 0.14 -0.48 7.60 -2.91 -0.02 -0.50 16 45 H 0.15 -1.50 8.06 -2.91 -0.02 -1.53 16 46 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 47 H 0.11 -1.01 6.30 -2.39 -0.02 -1.02 16 48 H 0.14 0.76 5.10 -2.91 -0.01 0.75 16 49 H 0.13 0.67 4.86 -2.91 -0.01 0.65 16 Total: 0.00 -23.35 430.51 3.98 -19.37 By element: Atomic # 1 Polarization: -20.47 SS G_CDS: -0.34 Total: -20.81 kcal Atomic # 6 Polarization: 7.21 SS G_CDS: 3.30 Total: 10.52 kcal Atomic # 7 Polarization: 3.11 SS G_CDS: -2.32 Total: 0.80 kcal Atomic # 8 Polarization: -7.18 SS G_CDS: -2.36 Total: -9.54 kcal Atomic # 9 Polarization: -4.08 SS G_CDS: 3.63 Total: -0.44 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: 2.05 Total: 0.11 kcal Total: -23.35 3.98 -19.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_4549640.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -233.239 kcal (2) G-P(sol) polarization free energy of solvation -23.350 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -256.590 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.976 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.375 kcal (6) G-S(sol) free energy of system = (1) + (5) -252.614 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds